Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474591

Identifier: 113474591

GI number: 113474591

Start: 1208481

End: 1209008

Strand: Direct

Name: 113474591

Synonym: Tery_0750

Alternate gene names: NA

Gene position: 1208481-1209008 (Clockwise)

Preceding gene: 113474590

Following gene: 113474592

Centisome position: 15.59

GC content: 34.85

Gene sequence:

>528_bases
ATGCTCGATCAAACCAGAGAAATAGCACAAACTTATTTAGGTAATTTGACAAAAGATGCAAACCTAGCCCAAAGGGTAAA
AACAGCCCACACACTCTCTAATTGTTTAGAGACATATCTGAGTCAAACCGATAGTTCCAAAGGAAGAATTCTCGCTGAAT
CAACTTCTGGAATAATTGTAGGTATTATTAAAAGTAGAGATTGGTCGATATGCGAAGGAGATGTATTTATTACCAAATCT
GGTAAGCTATTATTAATTCATCTACAGGAGCAAAAATTGATGGTATTGAGTTTCACCGCACCTGTAGAAAACCACGCCAT
ACAACTGGTTCATCTAGGTCATGTTTTGGGTAATCATCACTGGCCAATAATTATTAAAAAAAATAGAATCTATATTCAGT
TAATAGTAGACCCAGGAATAATTGAAGCTACTATTGCTAAATTTCAAATTCCTGGTTTGAAAATAGATTATGAATTGCGA
TCTCCCCAAGAACATTTCCAATTTTCCCAGCATAGTCATCATAGCTAA

Upstream 100 bases:

>100_bases
GTAAAACTCCACAAATAAAAAAGTATATTAAATATGCTTTAAATTGTGTTCGTAATTTAACGAACCGCTCTAGTTTGCCC
TATATTTCTAAATGAATTGA

Downstream 100 bases:

>100_bases
TGATTAATTCTGACATATCCGAACAACTTGCCTTAATGCAGTTATCTGATTCTTTTTTTCCAACTGGTTCTTTTACTTTT
TCTCACGGACTAGAGACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLDQTREIAQTYLGNLTKDANLAQRVKTAHTLSNCLETYLSQTDSSKGRILAESTSGIIVGIIKSRDWSICEGDVFITKS
GKLLLIHLQEQKLMVLSFTAPVENHAIQLVHLGHVLGNHHWPIIIKKNRIYIQLIVDPGIIEATIAKFQIPGLKIDYELR
SPQEHFQFSQHSHHS

Sequences:

>Translated_175_residues
MLDQTREIAQTYLGNLTKDANLAQRVKTAHTLSNCLETYLSQTDSSKGRILAESTSGIIVGIIKSRDWSICEGDVFITKS
GKLLLIHLQEQKLMVLSFTAPVENHAIQLVHLGHVLGNHHWPIIIKKNRIYIQLIVDPGIIEATIAKFQIPGLKIDYELR
SPQEHFQFSQHSHHS
>Mature_175_residues
MLDQTREIAQTYLGNLTKDANLAQRVKTAHTLSNCLETYLSQTDSSKGRILAESTSGIIVGIIKSRDWSICEGDVFITKS
GKLLLIHLQEQKLMVLSFTAPVENHAIQLVHLGHVLGNHHWPIIIKKNRIYIQLIVDPGIIEATIAKFQIPGLKIDYELR
SPQEHFQFSQHSHHS

Specific function: Unknown

COG id: COG2371

COG function: function code O; Urease accessory protein UreE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19753; Mature: 19753

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDQTREIAQTYLGNLTKDANLAQRVKTAHTLSNCLETYLSQTDSSKGRILAESTSGIIV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
GIIKSRDWSICEGDVFITKSGKLLLIHLQEQKLMVLSFTAPVENHAIQLVHLGHVLGNHH
EEEECCCCCEECCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEEHHHCCCC
WPIIIKKNRIYIQLIVDPGIIEATIAKFQIPGLKIDYELRSPQEHFQFSQHSHHS
CEEEEECCEEEEEEEECCCHHEEEEHEEECCCEEEEEEECCCHHHHCCCCCCCCC
>Mature Secondary Structure
MLDQTREIAQTYLGNLTKDANLAQRVKTAHTLSNCLETYLSQTDSSKGRILAESTSGIIV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
GIIKSRDWSICEGDVFITKSGKLLLIHLQEQKLMVLSFTAPVENHAIQLVHLGHVLGNHH
EEEECCCCCEECCCEEEECCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEEHHHCCCC
WPIIIKKNRIYIQLIVDPGIIEATIAKFQIPGLKIDYELRSPQEHFQFSQHSHHS
CEEEEECCEEEEEEEECCCHHEEEEHEEECCCEEEEEEECCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA