| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ureA
Identifier: 113474587
GI number: 113474587
Start: 1205759
End: 1206085
Strand: Direct
Name: ureA
Synonym: Tery_0746
Alternate gene names: 113474587
Gene position: 1205759-1206085 (Clockwise)
Preceding gene: 113474586
Following gene: 113474588
Centisome position: 15.56
GC content: 36.09
Gene sequence:
>327_bases ATGCAGCTATCACCCCAAGAAAAAGACAAATTAATGATTTTTACTGCTGCTCTACTTGCAGAAAAACGAAAGGAAAAAGG GATTAAATTAAACTATCCTGAAGCAGTAGCGTATATTTCTGCGGCTATATTAGAAGGTGCTAGAGAAGGAAAAACAGTAG CTGAATTGATGAGTTACGGCAGAACGGTTTTAAACCAGAATGAAGTAATGGAAGGGATATCAGAAATGATTGAAGAAGTG CAGGTAGAAGCTACCTTCCCAGATGGTACTAAATTAGTGACAGTGCACAATCCTATTATAATAAAAGAAAATGATTTGGC TGAATAA
Upstream 100 bases:
>100_bases CAAAATTGATGTTTTTTGTATAAATAAAGACTTTTTTAAATTTATTTTTTGGTAAAATATTTTAGTGAGCTTATTAAATA TCTTAAAGACTCTATAAATA
Downstream 100 bases:
>100_bases ATATATGATACCCTAATATAGGAGTCAGGTAGAGGAGCGATCGCTCAAGAGAAGTAAAAAGTTCAGAATTTAGCAGGCAG AAAAGGAACAGAAAAGATAT
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MQLSPQEKDKLMIFTAALLAEKRKEKGIKLNYPEAVAYISAAILEGAREGKTVAELMSYGRTVLNQNEVMEGISEMIEEV QVEATFPDGTKLVTVHNPIIIKENDLAE
Sequences:
>Translated_108_residues MQLSPQEKDKLMIFTAALLAEKRKEKGIKLNYPEAVAYISAAILEGAREGKTVAELMSYGRTVLNQNEVMEGISEMIEEV QVEATFPDGTKLVTVHNPIIIKENDLAE >Mature_108_residues MQLSPQEKDKLMIFTAALLAEKRKEKGIKLNYPEAVAYISAAILEGAREGKTVAELMSYGRTVLNQNEVMEGISEMIEEV QVEATFPDGTKLVTVHNPIIIKENDLAE
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease gamma subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE3_TRIEI (Q117Z9)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720648.1 - ProteinModelPortal: Q117Z9 - SMR: Q117Z9 - STRING: Q117Z9 - GeneID: 4242478 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0746 - NMPDR: fig|203124.1.peg.706 - eggNOG: COG0831 - HOGENOM: HBG286300 - OMA: YPEAVAY - BioCyc: TERY203124:TERY_0746-MONOMER - GO: GO:0005737 - HAMAP: MF_00739 - InterPro: IPR002026 - InterPro: IPR012010 - Gene3D: G3DSA:3.30.280.10 - PIRSF: PIRSF001223 - ProDom: PD002319 - TIGRFAMs: TIGR00193
Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg
EC number: =3.5.1.5
Molecular weight: Translated: 11993; Mature: 11993
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSPQEKDKLMIFTAALLAEKRKEKGIKLNYPEAVAYISAAILEGAREGKTVAELMSYG CCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RTVLNQNEVMEGISEMIEEVQVEATFPDGTKLVTVHNPIIIKENDLAE HHHCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEECCCCCC >Mature Secondary Structure MQLSPQEKDKLMIFTAALLAEKRKEKGIKLNYPEAVAYISAAILEGAREGKTVAELMSYG CCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RTVLNQNEVMEGISEMIEEVQVEATFPDGTKLVTVHNPIIIKENDLAE HHHCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA