| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is folK [H]
Identifier: 113474537
GI number: 113474537
Start: 1124315
End: 1124830
Strand: Direct
Name: folK [H]
Synonym: Tery_0688
Alternate gene names: 113474537
Gene position: 1124315-1124830 (Clockwise)
Preceding gene: 113474534
Following gene: 113474538
Centisome position: 14.51
GC content: 34.3
Gene sequence:
>516_bases ATGTCTAATCCTACTAACTTAAAGAACTCCCCAAAAAATCAAGGCCATGTAGCTATTGGTATGGGTAGCAATTTGGGAGA ATCCCTTGATACTCTCAAGAATGCCATTCAAACTTTAGATGAAATTGCTGGTATTAAATTAATTACTTATTCTAGTTGGT ATAGAACTAAACCTATAGGTCCACCACAACCAGATTATATTAATGGTTGTGCATTATTAAAAGTAGAATTAACCCCTCAT AAATTATTAGAAGTTCTGTTAGATGTTGAACAAAAATTTAAACGGGTACGTTTAGAACATTGGGGACCTAGAACTTTAGA TTTAGATTTAATTTTATATGATGATTTAATATTAGATACTCCTAATCTGCAAATACCCCATCCTCGAATGAAAGAAAGAG CTTTTGTACTTGTCCCACTAGCAGAAATAGCTCCTAATTGGATCGACCCAGTTTCGGGAAAAGCGATCGCTCTTCTTCAA GAAGAGGTAGAATGTTCTGGAATATCTAAGCTGTAA
Upstream 100 bases:
>100_bases TGTACTTTAAGAGTATAGAAATTACTATAAAATTGAGGATTATTGATAAAATAATATCAACCAATCACGAACCAGTAAAT TATAAGCGATCGCTCTAAAA
Downstream 100 bases:
>100_bases AATAGAAAATATTAACTTGATTTTCTGGTCACGGAACGTAAATTCAATAATACTGGAAATTTGTAGTTGATACTAAGGAA ATCTCTTGAGGGTAATTAAT
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSNPTNLKNSPKNQGHVAIGMGSNLGESLDTLKNAIQTLDEIAGIKLITYSSWYRTKPIGPPQPDYINGCALLKVELTPH KLLEVLLDVEQKFKRVRLEHWGPRTLDLDLILYDDLILDTPNLQIPHPRMKERAFVLVPLAEIAPNWIDPVSGKAIALLQ EEVECSGISKL
Sequences:
>Translated_171_residues MSNPTNLKNSPKNQGHVAIGMGSNLGESLDTLKNAIQTLDEIAGIKLITYSSWYRTKPIGPPQPDYINGCALLKVELTPH KLLEVLLDVEQKFKRVRLEHWGPRTLDLDLILYDDLILDTPNLQIPHPRMKERAFVLVPLAEIAPNWIDPVSGKAIALLQ EEVECSGISKL >Mature_170_residues SNPTNLKNSPKNQGHVAIGMGSNLGESLDTLKNAIQTLDEIAGIKLITYSSWYRTKPIGPPQPDYINGCALLKVELTPHK LLEVLLDVEQKFKRVRLEHWGPRTLDLDLILYDDLILDTPNLQIPHPRMKERAFVLVPLAEIAPNWIDPVSGKAIALLQE EVECSGISKL
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=134, Percent_Identity=44.0298507462687, Blast_Score=111, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6324073, Length=147, Percent_Identity=36.734693877551, Blast_Score=98, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 19095; Mature: 18964
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTNLKNSPKNQGHVAIGMGSNLGESLDTLKNAIQTLDEIAGIKLITYSSWYRTKPIG CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCC PPQPDYINGCALLKVELTPHKLLEVLLDVEQKFKRVRLEHWGPRTLDLDLILYDDLILDT CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEECC PNLQIPHPRMKERAFVLVPLAEIAPNWIDPVSGKAIALLQEEVECSGISKL CCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCC >Mature Secondary Structure SNPTNLKNSPKNQGHVAIGMGSNLGESLDTLKNAIQTLDEIAGIKLITYSSWYRTKPIG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCC PPQPDYINGCALLKVELTPHKLLEVLLDVEQKFKRVRLEHWGPRTLDLDLILYDDLILDT CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEECC PNLQIPHPRMKERAFVLVPLAEIAPNWIDPVSGKAIALLQEEVECSGISKL CCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]