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The map label for this gene is spoIID [H]

Identifier: 113474495

GI number: 113474495

Start: 1047480

End: 1048646

Strand: Direct

Name: spoIID [H]

Synonym: Tery_0642

Alternate gene names: 113474495

Gene position: 1047480-1048646 (Clockwise)

Preceding gene: 113474493

Following gene: 113474497

Centisome position: 13.52

GC content: 39.76

Gene sequence:

>1167_bases
ATGAGTTCTGGATTACTATTTACTTTTTTTGTTACTCGTACTACTAAACTTTTAAAAGCCTATTGGTGGACATCTATTTT
AGCATGGGTACTAATGATTACCCCTGCCCAAGGCTCCCTAATATTGCGAATTGCCATAATGGAAGGAGTTAAAGAAGTTA
AAATAGGGAGTTCCACAAACGCAATAGTTAGAGATGGTTCCGGTAGGGAAATTGGGGAACTACAACCAACTAAAGGTTTT
CTAGCAGAACTTCAATCAGGAAAAGTAGCTTTAGCCAACTGGATATCCGGTCAAATGTGGATCGAACCCAAAGCAGAAGG
TTATGTATGGATAGGCGATCGCTGGTATCGAGGTCGCACCCATATTATTCCCCACAAAGGAGGTATCACTGCTATTAATT
ATGTCAACTTTGAAGAATATCTCTATAGTGTCATTGGAGCGGAAATGAATAGTAACTGGCCACAAGAAGCCCTCAAAGCT
CAAGCTGTTGCTGCCAGGTCTTACGCTCTGAAGAAACGTCAAGAAAATAGTAACAATTTTTATGACCTAGGCGATAACCA
ATTCTGGCAAGTCTATCAAGGAATTAAAACAGAATCTCCAGGAACTTATGCTGCTGTTGATGCCACCCAAGGCCAAGTGC
TTACTTACAATGGTGAAATTATTTTAGCTTTATTTCATTCATCCTCTGGAGGGCACACAGAAAATGTAGAAGATATTTGG
TCAAACCCACTGCCCTACCTCCGAGCTGTTCCTGACTTTGATCAAGATGCCCCAGTTTATGAATGGACTAAATCATTCTC
TCAAGCAGAACTAAGGCAACGAATCTCAGGAGTTGGAAATATTATTTCCATGACACCCCAGACTACTACTCCTCACGGTA
GTGTTATTTCTATTAAAGTTTTAGGTGATGCAGGGGTTAAAACTCTTAAAGGCACAGATATTACAGCAGCTCTAGGTTTA
AAAAGTACCAGATTTACTGTTAGTGGCAAAAAAACTGTTGCTCAACAAATTCCTACCAGTTTTCAAATTACTGGAAAAGG
CTTTGGTCACGCTGTAGGAATGAGTCAATGGGGAGCCTACAGTTTAGCCAGGAATGGATATAACTACTACCAAATTTTAT
TGTACTATTACCAAGGGGTAACTTTAGCAAAAATTGACGTTCGATAA

Upstream 100 bases:

>100_bases
TAAAACCAGCATTTTGATTGGTTTTCCCTTATGACGTGCCCTTACAGGAGATTAAGAGTCTTCAACCAACATTGAGATCA
AATCAAAACATTAAACAAAC

Downstream 100 bases:

>100_bases
GATACTCCTCGCCAACTTTACGATATTTGGTGTAGGGTTGTTTCATCGTCCCGGCATATTATCAGACTTAACAAAACTCT
AATAACGGAAGGCTCTAGTA

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSSGLLFTFFVTRTTKLLKAYWWTSILAWVLMITPAQGSLILRIAIMEGVKEVKIGSSTNAIVRDGSGREIGELQPTKGF
LAELQSGKVALANWISGQMWIEPKAEGYVWIGDRWYRGRTHIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKA
QAVAARSYALKKRQENSNNFYDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHTENVEDIW
SNPLPYLRAVPDFDQDAPVYEWTKSFSQAELRQRISGVGNIISMTPQTTTPHGSVISIKVLGDAGVKTLKGTDITAALGL
KSTRFTVSGKKTVAQQIPTSFQITGKGFGHAVGMSQWGAYSLARNGYNYYQILLYYYQGVTLAKIDVR

Sequences:

>Translated_388_residues
MSSGLLFTFFVTRTTKLLKAYWWTSILAWVLMITPAQGSLILRIAIMEGVKEVKIGSSTNAIVRDGSGREIGELQPTKGF
LAELQSGKVALANWISGQMWIEPKAEGYVWIGDRWYRGRTHIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKA
QAVAARSYALKKRQENSNNFYDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHTENVEDIW
SNPLPYLRAVPDFDQDAPVYEWTKSFSQAELRQRISGVGNIISMTPQTTTPHGSVISIKVLGDAGVKTLKGTDITAALGL
KSTRFTVSGKKTVAQQIPTSFQITGKGFGHAVGMSQWGAYSLARNGYNYYQILLYYYQGVTLAKIDVR
>Mature_387_residues
SSGLLFTFFVTRTTKLLKAYWWTSILAWVLMITPAQGSLILRIAIMEGVKEVKIGSSTNAIVRDGSGREIGELQPTKGFL
AELQSGKVALANWISGQMWIEPKAEGYVWIGDRWYRGRTHIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKAQ
AVAARSYALKKRQENSNNFYDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHTENVEDIWS
NPLPYLRAVPDFDQDAPVYEWTKSFSQAELRQRISGVGNIISMTPQTTTPHGSVISIKVLGDAGVKTLKGTDITAALGLK
STRFTVSGKKTVAQQIPTSFQITGKGFGHAVGMSQWGAYSLARNGYNYYQILLYYYQGVTLAKIDVR

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 42985; Mature: 42854

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGLLFTFFVTRTTKLLKAYWWTSILAWVLMITPAQGSLILRIAIMEGVKEVKIGSSTN
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCHHHEECCCCCC
AIVRDGSGREIGELQPTKGFLAELQSGKVALANWISGQMWIEPKAEGYVWIGDRWYRGRT
EEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEEECCEEECCCE
HIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKAQAVAARSYALKKRQENSNNF
EEEECCCCEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
YDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHTENVEDIW
EECCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCHHHHH
SNPLPYLRAVPDFDQDAPVYEWTKSFSQAELRQRISGVGNIISMTPQTTTPHGSVISIKV
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEE
LGDAGVKTLKGTDITAALGLKSTRFTVSGKKTVAQQIPTSFQITGKGFGHAVGMSQWGAY
ECCCCCEEECCCCEEEEECCCCEEEEECCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCH
SLARNGYNYYQILLYYYQGVTLAKIDVR
HHHHCCCCHHEEEEHHHCCEEEEEEECC
>Mature Secondary Structure 
SSGLLFTFFVTRTTKLLKAYWWTSILAWVLMITPAQGSLILRIAIMEGVKEVKIGSSTN
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCHHHEECCCCCC
AIVRDGSGREIGELQPTKGFLAELQSGKVALANWISGQMWIEPKAEGYVWIGDRWYRGRT
EEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEEECCEEECCCE
HIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKAQAVAARSYALKKRQENSNNF
EEEECCCCEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
YDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHTENVEDIW
EECCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCHHHHH
SNPLPYLRAVPDFDQDAPVYEWTKSFSQAELRQRISGVGNIISMTPQTTTPHGSVISIKV
CCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEE
LGDAGVKTLKGTDITAALGLKSTRFTVSGKKTVAQQIPTSFQITGKGFGHAVGMSQWGAY
ECCCCCEEECCCCEEEEECCCCEEEEECCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCH
SLARNGYNYYQILLYYYQGVTLAKIDVR
HHHHCCCCHHEEEEHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]