| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is kbl [C]
Identifier: 113474234
GI number: 113474234
Start: 544282
End: 545463
Strand: Reverse
Name: kbl [C]
Synonym: Tery_0352
Alternate gene names: 113474234
Gene position: 545463-544282 (Counterclockwise)
Preceding gene: 113474238
Following gene: 113474232
Centisome position: 7.04
GC content: 33.16
Gene sequence:
>1182_bases ATGCAAAATAACCCCTATAGTTGGATAGAGTCATCCCTATCAACAATACATAAAGCTAACTGGTATCGTTCGGTCAAAAC TATTGAAAGTATTCCCGGTGCAATAATTAAATTAGAAGGAAAAAAACTAATAAATTTTGCCAGTAATGATTATCTAGGAT TAGCAGGAGATGAACGTTTAATCGCAGCAGCTATACAAGCAACAAAAGAATTTGGTAGCGGTAGTACAGGCTCGCGTTTA TTAACAGGTCATCGAGAAATACATCAGGAATTAGAACGAGAAATAGCCAAATTAAAACAAACAGAATCAGCATTAGTATT TAGTTCAGGATATTTAGCAAATATTGGTGTAATCTCTTCGGTTGTCAGTCAACGTGACCTAATTTTATCAGATGAATATA ATCATTCTAGCCTGAAAAATGGAGCTATTCTTAGTGGTGCCAAAATTATCGAATATAGCCACAATAATATTGAATATTTA AAAAATAAATTAGAACAAAAACGAGAAAATTATCGCCGCAGTTTAATAATTACAGATAGTGTTTTTAGTATGGATGGTGA TTTATGTAAATTGCCATTGTTATTAGATTTAGCAGAAAAATATAATAGTATGCTTTTAGTAGATGAAGCTCATGCAACAG GAGTATTTGGAATTAATGGAGGAGGTTGTGTTGAACACTTTAACTGTACAGGAAAACAATTAATTCAAATTGGTACTTTG AGTAAAGCATTAGGAAGTTTAGGCGGCTATGTTGCCGGGTCAAAAAATTTAATAGAATTTCTCAGAAATAGAACACCCAC TTGGATATATACCACAGGTTTAACTCCTGCTGATACTGCAGCAGCTTTAACAGCTATAAAAATTATTAAAAAAGAGCCAG AACGTCGTATGAAACTATGGCAGAATTTAGAGATTTTTATTAATTTACTAGAAACAGAAAGTCAATTGTTACACAAAGGT AAGAAAACCTCTAATTATGAATCACCAATTATTTGTTTTCCCCTTAAAAATGCAGTCGAAGCATTGAAAGTTGGAGAAAA GTTAAAACAGGAAGGAATATTTGCTCCTGCCATTCGCCCGCCTACTGTTAATACCAGTCGCATTCGTATTTCTCTAATGT CTACCCATGAAACAAGTCATCTTCAGCAATTAATAGCTGCATTAATTAATTTGAGTCAGTGA
Upstream 100 bases:
>100_bases CCTTAAAAATGTTAAGTGATAAATAATTTAATTTTTGGCCACTCCCTACTTTATTCTCTCTACTCCCTATTTCTTATTCC ATATTTCCTATTCCTTAAAA
Downstream 100 bases:
>100_bases TACCAATTCCAGAAAATAGCCCAAGGCCTTACTCAAAATTTTAGTTATTAAGTAATAAGTAAATAATAACGATATCTTTA ATAATTATAGGCGAAAAGCG
Product: 8-amino-7-oxononanoate synthase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MQNNPYSWIESSLSTIHKANWYRSVKTIESIPGAIIKLEGKKLINFASNDYLGLAGDERLIAAAIQATKEFGSGSTGSRL LTGHREIHQELEREIAKLKQTESALVFSSGYLANIGVISSVVSQRDLILSDEYNHSSLKNGAILSGAKIIEYSHNNIEYL KNKLEQKRENYRRSLIITDSVFSMDGDLCKLPLLLDLAEKYNSMLLVDEAHATGVFGINGGGCVEHFNCTGKQLIQIGTL SKALGSLGGYVAGSKNLIEFLRNRTPTWIYTTGLTPADTAAALTAIKIIKKEPERRMKLWQNLEIFINLLETESQLLHKG KKTSNYESPIICFPLKNAVEALKVGEKLKQEGIFAPAIRPPTVNTSRIRISLMSTHETSHLQQLIAALINLSQ
Sequences:
>Translated_393_residues MQNNPYSWIESSLSTIHKANWYRSVKTIESIPGAIIKLEGKKLINFASNDYLGLAGDERLIAAAIQATKEFGSGSTGSRL LTGHREIHQELEREIAKLKQTESALVFSSGYLANIGVISSVVSQRDLILSDEYNHSSLKNGAILSGAKIIEYSHNNIEYL KNKLEQKRENYRRSLIITDSVFSMDGDLCKLPLLLDLAEKYNSMLLVDEAHATGVFGINGGGCVEHFNCTGKQLIQIGTL SKALGSLGGYVAGSKNLIEFLRNRTPTWIYTTGLTPADTAAALTAIKIIKKEPERRMKLWQNLEIFINLLETESQLLHKG KKTSNYESPIICFPLKNAVEALKVGEKLKQEGIFAPAIRPPTVNTSRIRISLMSTHETSHLQQLIAALINLSQ >Mature_393_residues MQNNPYSWIESSLSTIHKANWYRSVKTIESIPGAIIKLEGKKLINFASNDYLGLAGDERLIAAAIQATKEFGSGSTGSRL LTGHREIHQELEREIAKLKQTESALVFSSGYLANIGVISSVVSQRDLILSDEYNHSSLKNGAILSGAKIIEYSHNNIEYL KNKLEQKRENYRRSLIITDSVFSMDGDLCKLPLLLDLAEKYNSMLLVDEAHATGVFGINGGGCVEHFNCTGKQLIQIGTL SKALGSLGGYVAGSKNLIEFLRNRTPTWIYTTGLTPADTAAALTAIKIIKKEPERRMKLWQNLEIFINLLETESQLLHKG KKTSNYESPIICFPLKNAVEALKVGEKLKQEGIFAPAIRPPTVNTSRIRISLMSTHETSHLQQLIAALINLSQ
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family
Homologues:
Organism=Homo sapiens, GI7657118, Length=390, Percent_Identity=31.025641025641, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI284448556, Length=416, Percent_Identity=29.0865384615385, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI4758668, Length=397, Percent_Identity=30.9823677581864, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI83977442, Length=354, Percent_Identity=30.5084745762712, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI83977440, Length=354, Percent_Identity=30.5084745762712, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI83977444, Length=381, Percent_Identity=29.9212598425197, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI119220554, Length=364, Percent_Identity=29.9450549450549, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI4502025, Length=356, Percent_Identity=30.3370786516854, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI40316939, Length=356, Percent_Identity=30.3370786516854, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI5454084, Length=265, Percent_Identity=30.188679245283, Blast_Score=125, Evalue=9e-29, Organism=Escherichia coli, GI1790046, Length=398, Percent_Identity=33.1658291457286, Blast_Score=224, Evalue=5e-60, Organism=Escherichia coli, GI1786993, Length=363, Percent_Identity=31.129476584022, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71994529, Length=397, Percent_Identity=33.7531486146096, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI32566772, Length=397, Percent_Identity=28.2115869017632, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17560914, Length=414, Percent_Identity=27.7777777777778, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17560912, Length=414, Percent_Identity=27.7777777777778, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71982617, Length=274, Percent_Identity=28.1021897810219, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982625, Length=274, Percent_Identity=28.1021897810219, Blast_Score=135, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6320438, Length=418, Percent_Identity=31.3397129186603, Blast_Score=159, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6320267, Length=259, Percent_Identity=32.4324324324324, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6323954, Length=254, Percent_Identity=28.3464566929134, Blast_Score=119, Evalue=8e-28, Organism=Drosophila melanogaster, GI24662918, Length=388, Percent_Identity=30.9278350515464, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17137420, Length=354, Percent_Identity=31.0734463276836, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI17136286, Length=319, Percent_Identity=30.7210031347962, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24653280, Length=339, Percent_Identity=27.4336283185841, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24653276, Length=339, Percent_Identity=27.4336283185841, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24653278, Length=339, Percent_Identity=27.4336283185841, Blast_Score=145, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BIKB_TRIEI (Q119K2)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720295.1 - ProteinModelPortal: Q119K2 - SMR: Q119K2 - STRING: Q119K2 - GeneID: 4242528 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0352 - NMPDR: fig|203124.1.peg.2452 - eggNOG: COG0156 - HOGENOM: HBG649839 - OMA: ANWYRSV - PhylomeDB: Q119K2 - ProtClustDB: PRK05958 - BioCyc: TERY203124:TERY_0352-MONOMER - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR00858
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.3.1.29; =2.3.1.47
Molecular weight: Translated: 43484; Mature: 43484
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: BINDING 23-23 BINDING 135-135 BINDING 183-183 BINDING 362-362
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNNPYSWIESSLSTIHKANWYRSVKTIESIPGAIIKLEGKKLINFASNDYLGLAGDERL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEECCCCHHH IAAAIQATKEFGSGSTGSRLLTGHREIHQELEREIAKLKQTESALVFSSGYLANIGVISS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH VVSQRDLILSDEYNHSSLKNGAILSGAKIIEYSHNNIEYLKNKLEQKRENYRRSLIITDS HHHHCCEEEECCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEH VFSMDGDLCKLPLLLDLAEKYNSMLLVDEAHATGVFGINGGGCVEHFNCTGKQLIQIGTL HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHH SKALGSLGGYVAGSKNLIEFLRNRTPTWIYTTGLTPADTAAALTAIKIIKKEPERRMKLW HHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH QNLEIFINLLETESQLLHKGKKTSNYESPIICFPLKNAVEALKVGEKLKQEGIFAPAIRP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC PTVNTSRIRISLMSTHETSHLQQLIAALINLSQ CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MQNNPYSWIESSLSTIHKANWYRSVKTIESIPGAIIKLEGKKLINFASNDYLGLAGDERL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEECCCCHHH IAAAIQATKEFGSGSTGSRLLTGHREIHQELEREIAKLKQTESALVFSSGYLANIGVISS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH VVSQRDLILSDEYNHSSLKNGAILSGAKIIEYSHNNIEYLKNKLEQKRENYRRSLIITDS HHHHCCEEEECCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEH VFSMDGDLCKLPLLLDLAEKYNSMLLVDEAHATGVFGINGGGCVEHFNCTGKQLIQIGTL HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHH SKALGSLGGYVAGSKNLIEFLRNRTPTWIYTTGLTPADTAAALTAIKIIKKEPERRMKLW HHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH QNLEIFINLLETESQLLHKGKKTSNYESPIICFPLKNAVEALKVGEKLKQEGIFAPAIRP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC PTVNTSRIRISLMSTHETSHLQQLIAALINLSQ CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA