Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474230

Identifier: 113474230

GI number: 113474230

Start: 536956

End: 538086

Strand: Reverse

Name: 113474230

Synonym: Tery_0347

Alternate gene names: NA

Gene position: 538086-536956 (Counterclockwise)

Preceding gene: 113474231

Following gene: 113474229

Centisome position: 6.94

GC content: 34.31

Gene sequence:

>1131_bases
ATGACAAACACTATTTTAAAATCTTCTACTCATCCACTTTCAGCTTATATAAACCGCTTAAAATCTGGTCAAGCTCTGCT
CAAGGATAGCCCAGAAAATGTCTTAGAAGTTGTCGGAATTTTAAAAAGTTACGGCATTGTATTAGATGCTTATTCCCAAA
ATCTTAATTACATTGCCGAACATCAATTTTTAGAAATGTTTCCCTTTTTCAAATACTTTAATGGTAAAATTTCATTAGGT
AAATTACTCAAGTTTTGGTCTCATGACAGAATTAATTATGAATATGCAGAATATTGCATGAGGGGAATGTTATGGCATGG
AGGGGGAGGTCTGGATACATATTTAGATTCAGCTGAGTTTAAACAATTAGCAAAAGCAGCAATAGATGCTAAAATTTCCG
GGAATTTGATGTTAATGCCACTCAATCAATTATTTCCAGAATTTTTACCAGATATGGTACGTCAACAAGCTTATTACAGT
GCCTTAGGTCAATTTTGGCGGGTAATGAGTGATATCTTTATCACCTTATCTGATCAATATGACCAAGGTCAAATAAAATC
TATTCCTGAAGTAGTCAATCATATTTTATCAGGGTTAGTCGCAGAAGCAAATTTACCAATTACTTTTGCTGTAAATATTA
AAGGTAAACCTCATGATATAATTCCTAAGTCAGTAGGTTTAACGTTTTTAACAGATACAGCGGTTCCTTATGTGGAAGCA
ATTTTCTTCCGAGGAACACCATTTTCAGGAACAGTTTCATATAACGCTCAAGCTCAACAAATTGACCCTGATCAAAGTCA
ATTTACTTATGGTGCCTTGTATGCAGATCCTTTACCTATTGGTGGTGCAGGAATTCCACCCACATTATTAATGCAAGATA
TGCGACATTTTATACCAGATTATCTTCTTGAATTTTATCAAAAAACTAACCGGGGTACAGATAATTTACGAGTGAAAATT
TGTGCCACTTTTCAAAAGTCAATGTTTTGTGTAACAACGGCAGCAGTTTTGGGTTTAACACCTCATCCTTTAGATACAGA
AAACCTAGAGGAACAAGCAGAAAATCAAGCCTATTTCGAAGGTTGGATGGATAGATTTTTAACATCAAGACTAGAGTTTG
TTAATAGTTAG

Upstream 100 bases:

>100_bases
AAAGCGCTTAACACTGATGCTAAAGAATCCCTTGCTGTCTCAAGTACAGCAGCGCCGGGAGGATGTCAATTAAGAATTGA
ATTTAGGAAACACTAAGCTT

Downstream 100 bases:

>100_bases
TATTGTCTCTTATAGCAGCTATGATAAATATTTTCTACAAATATTTACATTATTGTTGGAAGTCATTAGTTAGGACTTAA
TTAGGAGAAATATTATCATT

Product: CO2 hydration protein

Products: NA

Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTNTILKSSTHPLSAYINRLKSGQALLKDSPENVLEVVGILKSYGIVLDAYSQNLNYIAEHQFLEMFPFFKYFNGKISLG
KLLKFWSHDRINYEYAEYCMRGMLWHGGGGLDTYLDSAEFKQLAKAAIDAKISGNLMLMPLNQLFPEFLPDMVRQQAYYS
ALGQFWRVMSDIFITLSDQYDQGQIKSIPEVVNHILSGLVAEANLPITFAVNIKGKPHDIIPKSVGLTFLTDTAVPYVEA
IFFRGTPFSGTVSYNAQAQQIDPDQSQFTYGALYADPLPIGGAGIPPTLLMQDMRHFIPDYLLEFYQKTNRGTDNLRVKI
CATFQKSMFCVTTAAVLGLTPHPLDTENLEEQAENQAYFEGWMDRFLTSRLEFVNS

Sequences:

>Translated_376_residues
MTNTILKSSTHPLSAYINRLKSGQALLKDSPENVLEVVGILKSYGIVLDAYSQNLNYIAEHQFLEMFPFFKYFNGKISLG
KLLKFWSHDRINYEYAEYCMRGMLWHGGGGLDTYLDSAEFKQLAKAAIDAKISGNLMLMPLNQLFPEFLPDMVRQQAYYS
ALGQFWRVMSDIFITLSDQYDQGQIKSIPEVVNHILSGLVAEANLPITFAVNIKGKPHDIIPKSVGLTFLTDTAVPYVEA
IFFRGTPFSGTVSYNAQAQQIDPDQSQFTYGALYADPLPIGGAGIPPTLLMQDMRHFIPDYLLEFYQKTNRGTDNLRVKI
CATFQKSMFCVTTAAVLGLTPHPLDTENLEEQAENQAYFEGWMDRFLTSRLEFVNS
>Mature_375_residues
TNTILKSSTHPLSAYINRLKSGQALLKDSPENVLEVVGILKSYGIVLDAYSQNLNYIAEHQFLEMFPFFKYFNGKISLGK
LLKFWSHDRINYEYAEYCMRGMLWHGGGGLDTYLDSAEFKQLAKAAIDAKISGNLMLMPLNQLFPEFLPDMVRQQAYYSA
LGQFWRVMSDIFITLSDQYDQGQIKSIPEVVNHILSGLVAEANLPITFAVNIKGKPHDIIPKSVGLTFLTDTAVPYVEAI
FFRGTPFSGTVSYNAQAQQIDPDQSQFTYGALYADPLPIGGAGIPPTLLMQDMRHFIPDYLLEFYQKTNRGTDNLRVKIC
ATFQKSMFCVTTAAVLGLTPHPLDTENLEEQAENQAYFEGWMDRFLTSRLEFVNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42439; Mature: 42308

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTILKSSTHPLSAYINRLKSGQALLKDSPENVLEVVGILKSYGIVLDAYSQNLNYIAE
CCCCCCCCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCEEEEEHHCCCHHHHH
HQFLEMFPFFKYFNGKISLGKLLKFWSHDRINYEYAEYCMRGMLWHGGGGLDTYLDSAEF
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCHHHHHCHHHH
KQLAKAAIDAKISGNLMLMPLNQLFPEFLPDMVRQQAYYSALGQFWRVMSDIFITLSDQY
HHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
DQGQIKSIPEVVNHILSGLVAEANLPITFAVNIKGKPHDIIPKSVGLTFLTDTAVPYVEA
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHH
IFFRGTPFSGTVSYNAQAQQIDPDQSQFTYGALYADPLPIGGAGIPPTLLMQDMRHFIPD
HHCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YLLEFYQKTNRGTDNLRVKICATFQKSMFCVTTAAVLGLTPHPLDTENLEEQAENQAYFE
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GWMDRFLTSRLEFVNS
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNTILKSSTHPLSAYINRLKSGQALLKDSPENVLEVVGILKSYGIVLDAYSQNLNYIAE
CCCCCCCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCEEEEEHHCCCHHHHH
HQFLEMFPFFKYFNGKISLGKLLKFWSHDRINYEYAEYCMRGMLWHGGGGLDTYLDSAEF
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCHHHHHCHHHH
KQLAKAAIDAKISGNLMLMPLNQLFPEFLPDMVRQQAYYSALGQFWRVMSDIFITLSDQY
HHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
DQGQIKSIPEVVNHILSGLVAEANLPITFAVNIKGKPHDIIPKSVGLTFLTDTAVPYVEA
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHH
IFFRGTPFSGTVSYNAQAQQIDPDQSQFTYGALYADPLPIGGAGIPPTLLMQDMRHFIPD
HHCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YLLEFYQKTNRGTDNLRVKICATFQKSMFCVTTAAVLGLTPHPLDTENLEEQAENQAYFE
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GWMDRFLTSRLEFVNS
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA