Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yeiJ [C]

Identifier: 113474218

GI number: 113474218

Start: 506652

End: 507881

Strand: Reverse

Name: yeiJ [C]

Synonym: Tery_0332

Alternate gene names: 113474218

Gene position: 507881-506652 (Counterclockwise)

Preceding gene: 113474221

Following gene: 113474217

Centisome position: 6.55

GC content: 37.97

Gene sequence:

>1230_bases
GTGGAAAGATTAATATCAGCACTGGGGTTAATAGTTTTTATAGGTTTAGCTATTCTGTTATCGGCAAAAAGAAATGCAAT
TAAGTGGGAAACTGTTTTATGGGGAATAGGTTTGCAACTATTATTTGCACTGCTAATTTTAAAAAGCAAAACAGGTTTAG
CAGTGTTTAAATTTATTGCCGATATAATTAGTCAGTTACTCAAATTTTCTGATGCCGGGGCTAAATTTGTATTTGGAGAA
AACTATCTCGAACACTTTTTTGCCTTCCAGATACTACCAACAATTATATTTTTTTCTTCATTAATTACTATCTTATATCA
TTATGGAATTTTACAACAAGTAGTCAAAGCATTTGCATGGATAATGCTGAAAACTATGAAAACTTCTGGCACAGAGTCTC
TCGCTTGTTCCGCTAATATTTTTGTGGGGTCAACAGAAGCACCGTTGATGATTAAACCTTATGTGAAAACAATGACGAAA
TCAGAATTACACGCAGTGATGACAGGTGGTTTTGCTACAGTCGCTGGAGGAGTATTGGCAGCTTATATTTCTTTTGGAGT
ACCTGCCGAACATTTAATTGCTGCCTCGGTAATGTCAGCACCTGCAGCATTGGCAATATCAAAAATATTGTTGCCAGAAA
CAGAAGAGTCTCCGACGGCAGGAACGGTCAAGGTAGAGGTAGAACAGACTTATGCAAATGTTATTGATGCAGCAACATTA
GGTGCTAAAGAGGGAGCAAAATTGGCTGTCAATGTGGCAGCAATGTTAATTGCTTTTTTAGGGTTGGTAGCAATGGTCAA
TGGACTATTAGCATGGATAGGTAATGGTATTGGGTTGCCTCAGTTATCCTTGGAGTGGGTTTTCTCTTTATTATTTGCTC
CTGTTGCTTGGTTGATGGGAGTGCCTTGGGGAGACTGTCCTCAAGTGGGGATCTTGTTGGGTAAGAAAACAATTTTGAAT
GAATTTATCGCTTATTTAGATTTAAAGACACTCATTGAAAATGCTCAAAAAGGTGAAATGGTAAATGTGATTTCTGAGCG
ATCGCAGATTATTGCTACTTATGCTTTATGTGGGTTTTCTAATATTGGTTCCATTGCTGTACAGATAGGTGGAATTAGTA
CCATTGCACCATCACGACAGGGTGATTTGGCAAAGTTGGGAGTTCGAGCAATGATAGGTGGATCTATTGCTTGTTTTATG
ACTGCTTGTATCGCAGGAATTTTGTTGTAG

Upstream 100 bases:

>100_bases
TTATATAGCAAATATATAGTAAATATTTAATATGATCAGATATTTCGTGATGATTAATTTCAGAAAATAGTATAATAAAT
TAAGGGATATATAATTAATT

Downstream 100 bases:

>100_bases
AAATTTCCCTATTTTTGGCAAATAATTTCTCGAAATAGTGCTTTTTCTACTCAAAGATAGCGTTCCCATTACTTGGGCTA
GAAGTCTGAAATTATTATGC

Product: Na+ dependent nucleoside transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MERLISALGLIVFIGLAILLSAKRNAIKWETVLWGIGLQLLFALLILKSKTGLAVFKFIADIISQLLKFSDAGAKFVFGE
NYLEHFFAFQILPTIIFFSSLITILYHYGILQQVVKAFAWIMLKTMKTSGTESLACSANIFVGSTEAPLMIKPYVKTMTK
SELHAVMTGGFATVAGGVLAAYISFGVPAEHLIAASVMSAPAALAISKILLPETEESPTAGTVKVEVEQTYANVIDAATL
GAKEGAKLAVNVAAMLIAFLGLVAMVNGLLAWIGNGIGLPQLSLEWVFSLLFAPVAWLMGVPWGDCPQVGILLGKKTILN
EFIAYLDLKTLIENAQKGEMVNVISERSQIIATYALCGFSNIGSIAVQIGGISTIAPSRQGDLAKLGVRAMIGGSIACFM
TACIAGILL

Sequences:

>Translated_409_residues
MERLISALGLIVFIGLAILLSAKRNAIKWETVLWGIGLQLLFALLILKSKTGLAVFKFIADIISQLLKFSDAGAKFVFGE
NYLEHFFAFQILPTIIFFSSLITILYHYGILQQVVKAFAWIMLKTMKTSGTESLACSANIFVGSTEAPLMIKPYVKTMTK
SELHAVMTGGFATVAGGVLAAYISFGVPAEHLIAASVMSAPAALAISKILLPETEESPTAGTVKVEVEQTYANVIDAATL
GAKEGAKLAVNVAAMLIAFLGLVAMVNGLLAWIGNGIGLPQLSLEWVFSLLFAPVAWLMGVPWGDCPQVGILLGKKTILN
EFIAYLDLKTLIENAQKGEMVNVISERSQIIATYALCGFSNIGSIAVQIGGISTIAPSRQGDLAKLGVRAMIGGSIACFM
TACIAGILL
>Mature_409_residues
MERLISALGLIVFIGLAILLSAKRNAIKWETVLWGIGLQLLFALLILKSKTGLAVFKFIADIISQLLKFSDAGAKFVFGE
NYLEHFFAFQILPTIIFFSSLITILYHYGILQQVVKAFAWIMLKTMKTSGTESLACSANIFVGSTEAPLMIKPYVKTMTK
SELHAVMTGGFATVAGGVLAAYISFGVPAEHLIAASVMSAPAALAISKILLPETEESPTAGTVKVEVEQTYANVIDAATL
GAKEGAKLAVNVAAMLIAFLGLVAMVNGLLAWIGNGIGLPQLSLEWVFSLLFAPVAWLMGVPWGDCPQVGILLGKKTILN
EFIAYLDLKTLIENAQKGEMVNVISERSQIIATYALCGFSNIGSIAVQIGGISTIAPSRQGDLAKLGVRAMIGGSIACFM
TACIAGILL

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI11545853, Length=414, Percent_Identity=49.2753623188406, Blast_Score=386, Evalue=1e-107,
Organism=Homo sapiens, GI42542381, Length=416, Percent_Identity=44.4711538461538, Blast_Score=365, Evalue=1e-101,
Organism=Homo sapiens, GI227116277, Length=415, Percent_Identity=44.3373493975904, Blast_Score=351, Evalue=5e-97,
Organism=Escherichia coli, GI1788485, Length=419, Percent_Identity=33.1742243436754, Blast_Score=244, Evalue=5e-66,
Organism=Escherichia coli, GI1788488, Length=419, Percent_Identity=33.4128878281623, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1788737, Length=418, Percent_Identity=26.0765550239234, Blast_Score=150, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71991794, Length=419, Percent_Identity=35.799522673031, Blast_Score=234, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17560276, Length=402, Percent_Identity=35.5721393034826, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI25146537, Length=216, Percent_Identity=36.5740740740741, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI45552517, Length=410, Percent_Identity=42.6829268292683, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI19921868, Length=410, Percent_Identity=42.6829268292683, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI45552519, Length=410, Percent_Identity=42.6829268292683, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI281360430, Length=409, Percent_Identity=37.8973105134474, Blast_Score=278, Evalue=4e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43484; Mature: 43484

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLISALGLIVFIGLAILLSAKRNAIKWETVLWGIGLQLLFALLILKSKTGLAVFKFIA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIISQLLKFSDAGAKFVFGENYLEHFFAFQILPTIIFFSSLITILYHYGILQQVVKAFAW
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLKTMKTSGTESLACSANIFVGSTEAPLMIKPYVKTMTKSELHAVMTGGFATVAGGVLA
HHHHHHHCCCCCCEEEECEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AYISFGVPAEHLIAASVMSAPAALAISKILLPETEESPTAGTVKVEVEQTYANVIDAATL
HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHC
GAKEGAKLAVNVAAMLIAFLGLVAMVNGLLAWIGNGIGLPQLSLEWVFSLLFAPVAWLMG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
VPWGDCPQVGILLGKKTILNEFIAYLDLKTLIENAQKGEMVNVISERSQIIATYALCGFS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NIGSIAVQIGGISTIAPSRQGDLAKLGVRAMIGGSIACFMTACIAGILL
CCCCEEEEECCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERLISALGLIVFIGLAILLSAKRNAIKWETVLWGIGLQLLFALLILKSKTGLAVFKFIA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIISQLLKFSDAGAKFVFGENYLEHFFAFQILPTIIFFSSLITILYHYGILQQVVKAFAW
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLKTMKTSGTESLACSANIFVGSTEAPLMIKPYVKTMTKSELHAVMTGGFATVAGGVLA
HHHHHHHCCCCCCEEEECEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AYISFGVPAEHLIAASVMSAPAALAISKILLPETEESPTAGTVKVEVEQTYANVIDAATL
HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHC
GAKEGAKLAVNVAAMLIAFLGLVAMVNGLLAWIGNGIGLPQLSLEWVFSLLFAPVAWLMG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
VPWGDCPQVGILLGKKTILNEFIAYLDLKTLIENAQKGEMVNVISERSQIIATYALCGFS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NIGSIAVQIGGISTIAPSRQGDLAKLGVRAMIGGSIACFMTACIAGILL
CCCCEEEEECCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]