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The map label for this gene is nusG [H]

Identifier: 113474161

GI number: 113474161

Start: 411099

End: 411773

Strand: Reverse

Name: nusG [H]

Synonym: Tery_0266

Alternate gene names: 113474161

Gene position: 411773-411099 (Counterclockwise)

Preceding gene: 113474162

Following gene: 113474160

Centisome position: 5.31

GC content: 38.52

Gene sequence:

>675_bases
ATGAATTTATCTTTAGAAGAAACACAACAGACAACACAATTAGACCAAGGAGAAGAAAAAACTACAGAGTTTGCTAAAGG
AGAATTGCGATGGTACGCAGTACAAGTCGCTTCTGGTTGTGAGAAGCGGGTTAAGACTAATTTAAGCCAGCGTATTCAAA
CCCTTGATATTACAGATAAAATATTTAAAGTAGAAATACCTCACATAGCTGCAATTAAGCTTCGTAAAGACGGTAGTCGC
CAACATAGTGAAGAAAAAGTTTTTCCTGGGTATGTATTGGTACAAATGAAGCTAAATTGGCATGAGGAACAGAAAGAATG
GAGAATTGATGATGAGGCATGGCAAATAGTCAAAAGTACTCCAAATGTGATTAACTTTGTAGGAGCTGAACAAAAGCGTC
GCTATGGAAGAGGTCGTGGTCATGTTAAGCCATTACCTCTAAGTTCTTCAGAGGTGGAGAGGATCTTTAGGCGAGCTCAA
GAACAAGAGCCATATTTAAAAGTAACAGTGGCAGAAGGAGACCATATTACAGTTCTTTCAGGGCCATTTAAAGACTTTGA
AGGTGATGTGATTGAGGTCAGCCCAGAAAGAAATAAATTGAAGGCGCTACTATCCATTTTTGGACGTGATACGCCAGTAG
AATTAGAGTTTAATCAGGTAGAAAAGCATAAGTAA

Upstream 100 bases:

>100_bases
TCAGTGAATCTGTAGCTGTACTATTAATGGTTATTCTATCAGCAACAATCATTTACCTAGTAGATGAGTTTTTTAGTTGG
GGAGCCCAGGTGGTGTTTGG

Downstream 100 bases:

>100_bases
TGGCAAAAAAAGTCGTGGCAGTTATAAAGTTGGCTATTACGGCAGGAAAGGCTAACCCTTCTCCGCCCATTGGTCCAGCT
TTAGGTCAACATGGTGTAAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNLSLEETQQTTQLDQGEEKTTEFAKGELRWYAVQVASGCEKRVKTNLSQRIQTLDITDKIFKVEIPHIAAIKLRKDGSR
QHSEEKVFPGYVLVQMKLNWHEEQKEWRIDDEAWQIVKSTPNVINFVGAEQKRRYGRGRGHVKPLPLSSSEVERIFRRAQ
EQEPYLKVTVAEGDHITVLSGPFKDFEGDVIEVSPERNKLKALLSIFGRDTPVELEFNQVEKHK

Sequences:

>Translated_224_residues
MNLSLEETQQTTQLDQGEEKTTEFAKGELRWYAVQVASGCEKRVKTNLSQRIQTLDITDKIFKVEIPHIAAIKLRKDGSR
QHSEEKVFPGYVLVQMKLNWHEEQKEWRIDDEAWQIVKSTPNVINFVGAEQKRRYGRGRGHVKPLPLSSSEVERIFRRAQ
EQEPYLKVTVAEGDHITVLSGPFKDFEGDVIEVSPERNKLKALLSIFGRDTPVELEFNQVEKHK
>Mature_224_residues
MNLSLEETQQTTQLDQGEEKTTEFAKGELRWYAVQVASGCEKRVKTNLSQRIQTLDITDKIFKVEIPHIAAIKLRKDGSR
QHSEEKVFPGYVLVQMKLNWHEEQKEWRIDDEAWQIVKSTPNVINFVGAEQKRRYGRGRGHVKPLPLSSSEVERIFRRAQ
EQEPYLKVTVAEGDHITVLSGPFKDFEGDVIEVSPERNKLKALLSIFGRDTPVELEFNQVEKHK

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=195, Percent_Identity=41.025641025641, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 25927; Mature: 25927

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLEETQQTTQLDQGEEKTTEFAKGELRWYAVQVASGCEKRVKTNLSQRIQTLDITDK
CCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE
IFKVEIPHIAAIKLRKDGSRQHSEEKVFPGYVLVQMKLNWHEEQKEWRIDDEAWQIVKST
EEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHCC
PNVINFVGAEQKRRYGRGRGHVKPLPLSSSEVERIFRRAQEQEPYLKVTVAEGDHITVLS
CCCEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEE
GPFKDFEGDVIEVSPERNKLKALLSIFGRDTPVELEFNQVEKHK
CCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHCCCC
>Mature Secondary Structure
MNLSLEETQQTTQLDQGEEKTTEFAKGELRWYAVQVASGCEKRVKTNLSQRIQTLDITDK
CCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE
IFKVEIPHIAAIKLRKDGSRQHSEEKVFPGYVLVQMKLNWHEEQKEWRIDDEAWQIVKST
EEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHCC
PNVINFVGAEQKRRYGRGRGHVKPLPLSSSEVERIFRRAQEQEPYLKVTVAEGDHITVLS
CCCEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEE
GPFKDFEGDVIEVSPERNKLKALLSIFGRDTPVELEFNQVEKHK
CCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]