| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474054
Identifier: 113474054
GI number: 113474054
Start: 215800
End: 216867
Strand: Direct
Name: 113474054
Synonym: Tery_0147
Alternate gene names: NA
Gene position: 215800-216867 (Clockwise)
Preceding gene: 113474051
Following gene: 113474055
Centisome position: 2.78
GC content: 29.03
Gene sequence:
>1068_bases ATGAACATTATGTTAATTGGGTATTATGGCTATCATAACATTGGAGATGATTTGTTCGTTAAGCAACTTACTAATTACTT AGCTAGCAAACAAAAAGTTAAAAATATTTTTATTTTAGGTGCAGAAAACTATTATAAATTTGAGAGTACAAAGGTTTTTT ATTTTGCTAATAATCAATTATCAAAAATTAAGAGGGCTTTAATACTATTGAAAAGTGATTATATTGCTTGGGGTGGAGGA AGTTTAGACTTAGAAAGTAAACCAGGTAACTTATTGAAGTTGCAAACATTATCAAAATTAATGGGTAAGCGTTTTGGCTT TCTTGGAGTTGGATTGGAGTCTGTACTTAAGGAAAATAATAGCAAAAGCAAGATCGTCAATATTTTTGAAAAATCAGACT ATCTATATCTTAGAGATGACTATTCCTATGAAATGGTATTAAAGCAGCTTAAATTTAAGCAATTACCAAGTCTAGGAGGT GATTTAGCTTTCTTAGATTTGACTATTTATGAAAAATTTTTAAAGCCATTAAACCAAGAAATTAATATTGCTAATATATC ATTTTCTGGCAAAAACTGGTGGGGTGAGAGCAGAGCTAAATTTTATTCAAAACAGTTAATGCCTCTAATTAAAAATTATA ATTGTGTTATTCATTTGCTGCCTGGACATGTAGGAGAATATAGGGAAAGAAATGATAATCGTTTCCATGAATTGCTGAAA AAATATCTCCCTTCTACTAATTATAAAATTCATTCCTGGAAAGAACCAGAAGATTTTCTAGAAATTCTGAGCTTGATGAA TTTCCATATAGGAAATCGTCTCCACTCAATTATACTTGCTGATATACTAGGCATTCCAAATATTGGGATTGGTAGTTATA GATCAAAAATTTTCAATTACATTCATAAGACAGATACTCTAGTTAAAGAAAGATTAGTAGATTTTATGAAACCAATATCT ATGGAAAGGATAATGACAATTTTTCGTCAATACAAAAAACCAGAAAAGTTTATATTAAAAGAATTTTCTACCGCCAGGTA TTGCCTGGAAAAAATTTTCTTTTCTTAA
Upstream 100 bases:
>100_bases GCTAGGAGGATAAGGAAAAGTAGAGGAAAGCATTAAGATTTTCATAAGGATTCAAAATTGTTTAACTCACATATAATGAG GACGATCAAAAGCTTGTATT
Downstream 100 bases:
>100_bases TTATTTCTTTATCATTTAAGGATGATTTTAGAGCTAATTTCTCAGTTCAAGCAAAGTCCTTATTTACAAAAGTTTTACCA ATAAAACCTACCTATAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS
Sequences:
>Translated_355_residues MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS >Mature_355_residues MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41607; Mature: 41607
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQL CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCEEEEEECCHH SKIKRALILLKSDYIAWGGGSLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENN HHHHHHHHHHCCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCCHHCCHHHHHHCCC SKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGGDLAFLDLTIYEKFLKPLNQE CHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCC INIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHH KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNY HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IHKTDTLVKERLVDFMKPISMERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQL CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCEEEEEECCHH SKIKRALILLKSDYIAWGGGSLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENN HHHHHHHHHHCCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCCHHCCHHHHHHCCC SKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGGDLAFLDLTIYEKFLKPLNQE CHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCC INIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHH KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNY HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IHKTDTLVKERLVDFMKPISMERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA