Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474054

Identifier: 113474054

GI number: 113474054

Start: 215800

End: 216867

Strand: Direct

Name: 113474054

Synonym: Tery_0147

Alternate gene names: NA

Gene position: 215800-216867 (Clockwise)

Preceding gene: 113474051

Following gene: 113474055

Centisome position: 2.78

GC content: 29.03

Gene sequence:

>1068_bases
ATGAACATTATGTTAATTGGGTATTATGGCTATCATAACATTGGAGATGATTTGTTCGTTAAGCAACTTACTAATTACTT
AGCTAGCAAACAAAAAGTTAAAAATATTTTTATTTTAGGTGCAGAAAACTATTATAAATTTGAGAGTACAAAGGTTTTTT
ATTTTGCTAATAATCAATTATCAAAAATTAAGAGGGCTTTAATACTATTGAAAAGTGATTATATTGCTTGGGGTGGAGGA
AGTTTAGACTTAGAAAGTAAACCAGGTAACTTATTGAAGTTGCAAACATTATCAAAATTAATGGGTAAGCGTTTTGGCTT
TCTTGGAGTTGGATTGGAGTCTGTACTTAAGGAAAATAATAGCAAAAGCAAGATCGTCAATATTTTTGAAAAATCAGACT
ATCTATATCTTAGAGATGACTATTCCTATGAAATGGTATTAAAGCAGCTTAAATTTAAGCAATTACCAAGTCTAGGAGGT
GATTTAGCTTTCTTAGATTTGACTATTTATGAAAAATTTTTAAAGCCATTAAACCAAGAAATTAATATTGCTAATATATC
ATTTTCTGGCAAAAACTGGTGGGGTGAGAGCAGAGCTAAATTTTATTCAAAACAGTTAATGCCTCTAATTAAAAATTATA
ATTGTGTTATTCATTTGCTGCCTGGACATGTAGGAGAATATAGGGAAAGAAATGATAATCGTTTCCATGAATTGCTGAAA
AAATATCTCCCTTCTACTAATTATAAAATTCATTCCTGGAAAGAACCAGAAGATTTTCTAGAAATTCTGAGCTTGATGAA
TTTCCATATAGGAAATCGTCTCCACTCAATTATACTTGCTGATATACTAGGCATTCCAAATATTGGGATTGGTAGTTATA
GATCAAAAATTTTCAATTACATTCATAAGACAGATACTCTAGTTAAAGAAAGATTAGTAGATTTTATGAAACCAATATCT
ATGGAAAGGATAATGACAATTTTTCGTCAATACAAAAAACCAGAAAAGTTTATATTAAAAGAATTTTCTACCGCCAGGTA
TTGCCTGGAAAAAATTTTCTTTTCTTAA

Upstream 100 bases:

>100_bases
GCTAGGAGGATAAGGAAAAGTAGAGGAAAGCATTAAGATTTTCATAAGGATTCAAAATTGTTTAACTCACATATAATGAG
GACGATCAAAAGCTTGTATT

Downstream 100 bases:

>100_bases
TTATTTCTTTATCATTTAAGGATGATTTTAGAGCTAATTTCTCAGTTCAAGCAAAGTCCTTATTTACAAAAGTTTTACCA
ATAAAACCTACCTATAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG
SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG
DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK
KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS
MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS

Sequences:

>Translated_355_residues
MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG
SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG
DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK
KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS
MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS
>Mature_355_residues
MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQLSKIKRALILLKSDYIAWGGG
SLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENNSKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGG
DLAFLDLTIYEKFLKPLNQEINIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK
KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNYIHKTDTLVKERLVDFMKPIS
MERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41607; Mature: 41607

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCEEEEEECCHH
SKIKRALILLKSDYIAWGGGSLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENN
HHHHHHHHHHCCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCCHHCCHHHHHHCCC
SKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGGDLAFLDLTIYEKFLKPLNQE
CHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCC
INIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHH
KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNY
HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IHKTDTLVKERLVDFMKPISMERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIMLIGYYGYHNIGDDLFVKQLTNYLASKQKVKNIFILGAENYYKFESTKVFYFANNQL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEECCEEEEEECCHH
SKIKRALILLKSDYIAWGGGSLDLESKPGNLLKLQTLSKLMGKRFGFLGVGLESVLKENN
HHHHHHHHHHCCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCCHHCCHHHHHHCCC
SKSKIVNIFEKSDYLYLRDDYSYEMVLKQLKFKQLPSLGGDLAFLDLTIYEKFLKPLNQE
CHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCC
INIANISFSGKNWWGESRAKFYSKQLMPLIKNYNCVIHLLPGHVGEYRERNDNRFHELLK
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHHH
KYLPSTNYKIHSWKEPEDFLEILSLMNFHIGNRLHSIILADILGIPNIGIGSYRSKIFNY
HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IHKTDTLVKERLVDFMKPISMERIMTIFRQYKKPEKFILKEFSTARYCLEKIFFS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA