| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474048
Identifier: 113474048
GI number: 113474048
Start: 207239
End: 207502
Strand: Direct
Name: 113474048
Synonym: Tery_0141
Alternate gene names: NA
Gene position: 207239-207502 (Clockwise)
Preceding gene: 113474046
Following gene: 113474049
Centisome position: 2.67
GC content: 34.09
Gene sequence:
>264_bases ATGGCTAATAACTTACTGATTTCTGAGAGCTCATCTAGTTTTTCTAAAGCTGATTCTTCTTTAGATGCTGCTAGAAAAGT ACATGAAGAAGGAAAATCAACTAATCAAACCCGTACCTTAAAACAGATGAAGTCCTTATATCAAACAGATCAACAAGTTA AGTTGCTTCACCTTGAGGCAGAAATAGAAACTCTCTTATTAGAATTACGAACCATTAGAGAACGCAATTTAGTCTCACTG ATTGAAAAAGAAGTCAGCCTATAA
Upstream 100 bases:
>100_bases AAGATCTAATTTTGGAGGTTAAATTTTGATTTAATCAAGGTTAAATAGCTTAACTTGCTGTAATCTATTCTTAGATAAAA ACAATTTTAAGTGGGTATAA
Downstream 100 bases:
>100_bases AAATTCTGAAGGCTATTATAGCTAAACTTGAGCAAAAAAAAAGAAGTAGCAAAAGCAACAAAATTAATTAATCTGGTTAG TAAAAAGATTATGATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MANNLLISESSSSFSKADSSLDAARKVHEEGKSTNQTRTLKQMKSLYQTDQQVKLLHLEAEIETLLLELRTIRERNLVSL IEKEVSL
Sequences:
>Translated_87_residues MANNLLISESSSSFSKADSSLDAARKVHEEGKSTNQTRTLKQMKSLYQTDQQVKLLHLEAEIETLLLELRTIRERNLVSL IEKEVSL >Mature_86_residues ANNLLISESSSSFSKADSSLDAARKVHEEGKSTNQTRTLKQMKSLYQTDQQVKLLHLEAEIETLLLELRTIRERNLVSLI EKEVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9887; Mature: 9756
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNLLISESSSSFSKADSSLDAARKVHEEGKSTNQTRTLKQMKSLYQTDQQVKLLHLEA CCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH EIETLLLELRTIRERNLVSLIEKEVSL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ANNLLISESSSSFSKADSSLDAARKVHEEGKSTNQTRTLKQMKSLYQTDQQVKLLHLEA CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH EIETLLLELRTIRERNLVSLIEKEVSL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA