| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474023
Identifier: 113474023
GI number: 113474023
Start: 154460
End: 154756
Strand: Reverse
Name: 113474023
Synonym: Tery_0114
Alternate gene names: NA
Gene position: 154756-154460 (Counterclockwise)
Preceding gene: 113474024
Following gene: 113474022
Centisome position: 2.0
GC content: 32.66
Gene sequence:
>297_bases TTGCCCCAACAAAGGCAAATAGAAATAGATTTGGGACTAAATACGAGCAACTTTGACGAGCTAAAAAAATCCGCACATCA TTCAAAGAGATTAGCAGAATTGGAGGGTTGTTTTGCAGATGAACACTTTACTTTTTTAGACAAAGATGTGGCTTTTCCAC CTTCAAAAAATTTTTATGACGACACAGTTAAAAAAGCAGTGGCAAATTTATATAAAGTTGATTTTGAATCTTATGGTTAC GATAAAAACATGGGGTTAGTAGATATAGACATTTTTTCTGTTGTTTTGACTAATTGA
Upstream 100 bases:
>100_bases GGCATTATTAGTTATCGTAGCCCAAAAAATACACCAGAAGATTACTTTCTAGCAGAACGAAAAATCAGTTCCATAGTTCT ATATTTAATATTATCGTTTT
Downstream 100 bases:
>100_bases GAATCAGCGATCGCAACGGTCGAGTAATTATCGGATATCTAATTGTGTTCTTCATTTTTGGCGGACTTGTCGGGCGCAAA GTTGCCAGAAACTACAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPQQRQIEIDLGLNTSNFDELKKSAHHSKRLAELEGCFADEHFTFLDKDVAFPPSKNFYDDTVKKAVANLYKVDFESYGY DKNMGLVDIDIFSVVLTN
Sequences:
>Translated_98_residues MPQQRQIEIDLGLNTSNFDELKKSAHHSKRLAELEGCFADEHFTFLDKDVAFPPSKNFYDDTVKKAVANLYKVDFESYGY DKNMGLVDIDIFSVVLTN >Mature_97_residues PQQRQIEIDLGLNTSNFDELKKSAHHSKRLAELEGCFADEHFTFLDKDVAFPPSKNFYDDTVKKAVANLYKVDFESYGYD KNMGLVDIDIFSVVLTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11239; Mature: 11107
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQRQIEIDLGLNTSNFDELKKSAHHSKRLAELEGCFADEHFTFLDKDVAFPPSKNFYD CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHH DTVKKAVANLYKVDFESYGYDKNMGLVDIDIFSVVLTN HHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEECC >Mature Secondary Structure PQQRQIEIDLGLNTSNFDELKKSAHHSKRLAELEGCFADEHFTFLDKDVAFPPSKNFYD CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHH DTVKKAVANLYKVDFESYGYDKNMGLVDIDIFSVVLTN HHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA