| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113473988
Identifier: 113473988
GI number: 113473988
Start: 92879
End: 93088
Strand: Reverse
Name: 113473988
Synonym: Tery_0066
Alternate gene names: NA
Gene position: 93088-92879 (Counterclockwise)
Preceding gene: 113473991
Following gene: 113473987
Centisome position: 1.2
GC content: 27.14
Gene sequence:
>210_bases ATGTCTTTAAGCGAAGAAATAAAAGTCAAAAATATCCACCACTTAGGAATACTAGCAGGACTAATTGATGAGATGGGAAT AGTAGAAATAATTAACCAAAAATTAGGAATTGATAGTAAAAAAAAAATTATATCAGGACAAGTAATTGTTACCATCAAGT TTCCTAGAATAGGTAAAAAAAACTCAAGTGACAAAGAAATTATTAAGTAA
Upstream 100 bases:
>100_bases ATCCTGTTTTAAGGCCCGTTTAAGATTTAGCATTCTTCGTCAATTTCTTCTTAACTTAACTTATTTTCACTTATTTACCA ACAACTCTAATATAAAAAGA
Downstream 100 bases:
>100_bases ATTTTAACAGCATATTGAGTTAATCATAGATAGCTATGAACAGGGTATAGAAAGGCTATAAAAATCTGAAAAACAAAAAG AATATTACTCAGGAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSLSEEIKVKNIHHLGILAGLIDEMGIVEIINQKLGIDSKKKIISGQVIVTIKFPRIGKKNSSDKEIIK
Sequences:
>Translated_69_residues MSLSEEIKVKNIHHLGILAGLIDEMGIVEIINQKLGIDSKKKIISGQVIVTIKFPRIGKKNSSDKEIIK >Mature_68_residues SLSEEIKVKNIHHLGILAGLIDEMGIVEIINQKLGIDSKKKIISGQVIVTIKFPRIGKKNSSDKEIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7651; Mature: 7520
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSEEIKVKNIHHLGILAGLIDEMGIVEIINQKLGIDSKKKIISGQVIVTIKFPRIGKK CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCC NSSDKEIIK CCCCCCCCC >Mature Secondary Structure SLSEEIKVKNIHHLGILAGLIDEMGIVEIINQKLGIDSKKKIISGQVIVTIKFPRIGKK CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCC NSSDKEIIK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA