| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473986
Identifier: 113473986
GI number: 113473986
Start: 90562
End: 90864
Strand: Reverse
Name: 113473986
Synonym: Tery_0064
Alternate gene names: NA
Gene position: 90864-90562 (Counterclockwise)
Preceding gene: 113473987
Following gene: 113473984
Centisome position: 1.17
GC content: 24.09
Gene sequence:
>303_bases TTGAAGCATGTATTACCCAAAATTTTGAAGGCAAAAACATATAATTTACTCGTGTATAAAAAACAGAAATATTGTCAAAA ATATGTTCTAGATAAATGGTATATTCTCTCCAATTTATCATCTCCTGAAAAGATTAAAAAAATATATAGTCAGAGAATGG GAAATGAAGCAATTTTTAAAGAATATAAAACTTGTGGTTACAATCTAAAATCAGCTAAGGCTAATGAAACGAGATTAAGT AATTTAATTTTATTAATAGCTATTTTATACACAATTAGTTCATTTCAAGTCCAAAAAAATTAA
Upstream 100 bases:
>100_bases ATTTTGTTTTCTAAAAACAAAATCGACGATAATTAAACGAAGTAAAAAATATTGTAAAACCTCAGAATTAAAAGTAAATT TCGGTGAGACTAAACTATTA
Downstream 100 bases:
>100_bases AAATAAAGTGGTTAAAAATATATATCAATAACTAATGAAAAAGTGAGAATAAAAAAAGAAGAAACAGTATTTTTCTTGTA GAATTATCTATGATTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; IS4 Family Transposase
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKHVLPKILKAKTYNLLVYKKQKYCQKYVLDKWYILSNLSSPEKIKKIYSQRMGNEAIFKEYKTCGYNLKSAKANETRLS NLILLIAILYTISSFQVQKN
Sequences:
>Translated_100_residues MKHVLPKILKAKTYNLLVYKKQKYCQKYVLDKWYILSNLSSPEKIKKIYSQRMGNEAIFKEYKTCGYNLKSAKANETRLS NLILLIAILYTISSFQVQKN >Mature_100_residues MKHVLPKILKAKTYNLLVYKKQKYCQKYVLDKWYILSNLSSPEKIKKIYSQRMGNEAIFKEYKTCGYNLKSAKANETRLS NLILLIAILYTISSFQVQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11786; Mature: 11786
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVLPKILKAKTYNLLVYKKQKYCQKYVLDKWYILSNLSSPEKIKKIYSQRMGNEAIFK CCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH EYKTCGYNLKSAKANETRLSNLILLIAILYTISSFQVQKN HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKHVLPKILKAKTYNLLVYKKQKYCQKYVLDKWYILSNLSSPEKIKKIYSQRMGNEAIFK CCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH EYKTCGYNLKSAKANETRLSNLILLIAILYTISSFQVQKN HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA