Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113473975

Identifier: 113473975

GI number: 113473975

Start: 71367

End: 72836

Strand: Direct

Name: 113473975

Synonym: Tery_0047

Alternate gene names: NA

Gene position: 71367-72836 (Clockwise)

Preceding gene: 113473974

Following gene: 113473977

Centisome position: 0.92

GC content: 36.94

Gene sequence:

>1470_bases
ATGCAAATTCTACACCTGAATCTTAAGCTAAAAGGAGATGATTCTGTTGAATTCCGTTTCTATTGGGATAACCTCCTCGA
GTTTCAACCTGTTTCGCGCAGTCTAGGAGAAATCTCAGACTTAATTAAAAAGTCAGAAGCTGAGTATTATACTTACCTTC
CAGTAGACTATACCCAAACAGGTCAAAATCTCTACAAATGGCTAAATGGAGATAAACGGGATCTAGACAGAGTAATTCAT
GATGGTTCATCAGGCGAAGGAATTGTTCTAGCAATTGCAACATTCGAAGGGCTATCACATCTACCTTGGGAACTGCTGCA
TAATGATGAAGATTTCTTAGTTAATTCTACACCTGCAATTGTTCCCGTTCGTTGGGTGCCTAATTCAGGAAGCATGAAAG
TACTTACTATGGATGATAAACCCAAGAATGAAGCATTGAGTGTGGCATTTATGCCAGCTTCTCCTCACAATAAACCAAAA
TTAGACCTTGTAGAAGAGGAAATAAGTATTTTAAAAGCAAGCCAAGAGTCCCCTTTCTCTCTAGAAATAGAATATAGTGG
TTGCTTGAATAAGCTGAAGGGTTTGATAAATAAACATGATAAAGGCTTTTTTGATGTGCTTCATCTAGCAGGTCATGCAG
AAAACTCTTATTTGATTACAGAAACAGAATCTGGAGAGGCTAAATATAGTAGTGCTGAAGATATTGCTGATGCACTACTA
TTTAAAAATCCTCAACTGATTTTCTTGTCGGCTTGTCGGACTGCTTATTCACGGGAGTCATCTATTCCTTCGATGGCTGA
AAGTTTAGTAAAAAATGGTTTTAAAGCAGTTTTGGGCTGGGGCGATCGGGTATTAGATACTAGCGCAATAGCGGCTGCAG
AAATATTTTATCAGAATTTGTCATCAGGTTCTACAGTAACCCAAGCTTTGGCTCAAACTTATCGGAAACTAATTGAAACA
GAGAAAGGTTGGCACTTGTTGCGATTATATGTCAAAGAAAGTTTACCGGGAGCATTAGTAACAGCATCGGCAACACTTGG
ACGAATACCACCGCATCGGAAAATAACGACTCTACCTGTAAAAAATTGTTACTATCAGCTGAAACAATGTGTATCTATCC
TAAAACAAGATAGTAAAAAAGGTGTCTTGATTTTAGGAAAAAGTAATATTACTTCCTTATTTACTGATGGACTATGTGAA
CGTTTACCCAAGTCTAAGATTGTTAAATTGGATCAACAAATTGATGAATACGAATTCGTTAATAAACTAGCGAGTGAATT
GGAAAATTCAGAGCAGCGTAATGCACTTCGTAATGCATTTCAACGCGGTGATAAACTTAAATATCCACTAAGAGATTTAT
TTAAAAAACGGAATGAAACTGGACTAGAACCTTTAGACATCTCCAAAAATACTCAAACATTTATCCTAACTATCTTTAGT
GGTGCGATCGCTACTTATGAAGATAGTTAA

Upstream 100 bases:

>100_bases
GTTGTTGCTCCCAATAGTGGAAAACGACTGTTACTTAAAGATGCAACTATAGAGGACATCAAAAAGATTATTGAAGATTA
ACTAAGGCAATAGTACAGTT

Downstream 100 bases:

>100_bases
TTTGTACAGTTTTATGGGCATCAGAGATACTTCGTGTTACTAATTAAAATATTTATTGTACTTTGATTTATTATTTTTAT
CTCGGCTTTTGATGGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: GUN4 Domain-Containing Protein; Heterocyst Differentiation Protein HetF; Heterocyst Differentiation Protein; GUN4-Like Protein; GUN4-Like; AAA ATPase; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MQILHLNLKLKGDDSVEFRFYWDNLLEFQPVSRSLGEISDLIKKSEAEYYTYLPVDYTQTGQNLYKWLNGDKRDLDRVIH
DGSSGEGIVLAIATFEGLSHLPWELLHNDEDFLVNSTPAIVPVRWVPNSGSMKVLTMDDKPKNEALSVAFMPASPHNKPK
LDLVEEEISILKASQESPFSLEIEYSGCLNKLKGLINKHDKGFFDVLHLAGHAENSYLITETESGEAKYSSAEDIADALL
FKNPQLIFLSACRTAYSRESSIPSMAESLVKNGFKAVLGWGDRVLDTSAIAAAEIFYQNLSSGSTVTQALAQTYRKLIET
EKGWHLLRLYVKESLPGALVTASATLGRIPPHRKITTLPVKNCYYQLKQCVSILKQDSKKGVLILGKSNITSLFTDGLCE
RLPKSKIVKLDQQIDEYEFVNKLASELENSEQRNALRNAFQRGDKLKYPLRDLFKKRNETGLEPLDISKNTQTFILTIFS
GAIATYEDS

Sequences:

>Translated_489_residues
MQILHLNLKLKGDDSVEFRFYWDNLLEFQPVSRSLGEISDLIKKSEAEYYTYLPVDYTQTGQNLYKWLNGDKRDLDRVIH
DGSSGEGIVLAIATFEGLSHLPWELLHNDEDFLVNSTPAIVPVRWVPNSGSMKVLTMDDKPKNEALSVAFMPASPHNKPK
LDLVEEEISILKASQESPFSLEIEYSGCLNKLKGLINKHDKGFFDVLHLAGHAENSYLITETESGEAKYSSAEDIADALL
FKNPQLIFLSACRTAYSRESSIPSMAESLVKNGFKAVLGWGDRVLDTSAIAAAEIFYQNLSSGSTVTQALAQTYRKLIET
EKGWHLLRLYVKESLPGALVTASATLGRIPPHRKITTLPVKNCYYQLKQCVSILKQDSKKGVLILGKSNITSLFTDGLCE
RLPKSKIVKLDQQIDEYEFVNKLASELENSEQRNALRNAFQRGDKLKYPLRDLFKKRNETGLEPLDISKNTQTFILTIFS
GAIATYEDS
>Mature_489_residues
MQILHLNLKLKGDDSVEFRFYWDNLLEFQPVSRSLGEISDLIKKSEAEYYTYLPVDYTQTGQNLYKWLNGDKRDLDRVIH
DGSSGEGIVLAIATFEGLSHLPWELLHNDEDFLVNSTPAIVPVRWVPNSGSMKVLTMDDKPKNEALSVAFMPASPHNKPK
LDLVEEEISILKASQESPFSLEIEYSGCLNKLKGLINKHDKGFFDVLHLAGHAENSYLITETESGEAKYSSAEDIADALL
FKNPQLIFLSACRTAYSRESSIPSMAESLVKNGFKAVLGWGDRVLDTSAIAAAEIFYQNLSSGSTVTQALAQTYRKLIET
EKGWHLLRLYVKESLPGALVTASATLGRIPPHRKITTLPVKNCYYQLKQCVSILKQDSKKGVLILGKSNITSLFTDGLCE
RLPKSKIVKLDQQIDEYEFVNKLASELENSEQRNALRNAFQRGDKLKYPLRDLFKKRNETGLEPLDISKNTQTFILTIFS
GAIATYEDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54915; Mature: 54915

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILHLNLKLKGDDSVEFRFYWDNLLEFQPVSRSLGEISDLIKKSEAEYYTYLPVDYTQT
CEEEEEEEEECCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
GQNLYKWLNGDKRDLDRVIHDGSSGEGIVLAIATFEGLSHLPWELLHNDEDFLVNSTPAI
HHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCEEEECCCCE
VPVRWVPNSGSMKVLTMDDKPKNEALSVAFMPASPHNKPKLDLVEEEISILKASQESPFS
EEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEE
LEIEYSGCLNKLKGLINKHDKGFFDVLHLAGHAENSYLITETESGEAKYSSAEDIADALL
EEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
FKNPQLIFLSACRTAYSRESSIPSMAESLVKNGFKAVLGWGDRVLDTSAIAAAEIFYQNL
HCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHC
SSGSTVTQALAQTYRKLIETEKGWHLLRLYVKESLPGALVTASATLGRIPPHRKITTLPV
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCEEECCH
KNCYYQLKQCVSILKQDSKKGVLILGKSNITSLFTDGLCERLPKSKIVKLDQQIDEYEFV
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NKLASELENSEQRNALRNAFQRGDKLKYPLRDLFKKRNETGLEPLDISKNTQTFILTIFS
HHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
GAIATYEDS
CCEEECCCC
>Mature Secondary Structure
MQILHLNLKLKGDDSVEFRFYWDNLLEFQPVSRSLGEISDLIKKSEAEYYTYLPVDYTQT
CEEEEEEEEECCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
GQNLYKWLNGDKRDLDRVIHDGSSGEGIVLAIATFEGLSHLPWELLHNDEDFLVNSTPAI
HHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCEEEECCCCE
VPVRWVPNSGSMKVLTMDDKPKNEALSVAFMPASPHNKPKLDLVEEEISILKASQESPFS
EEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEE
LEIEYSGCLNKLKGLINKHDKGFFDVLHLAGHAENSYLITETESGEAKYSSAEDIADALL
EEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
FKNPQLIFLSACRTAYSRESSIPSMAESLVKNGFKAVLGWGDRVLDTSAIAAAEIFYQNL
HCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHC
SSGSTVTQALAQTYRKLIETEKGWHLLRLYVKESLPGALVTASATLGRIPPHRKITTLPV
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCEEECCH
KNCYYQLKQCVSILKQDSKKGVLILGKSNITSLFTDGLCERLPKSKIVKLDQQIDEYEFV
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NKLASELENSEQRNALRNAFQRGDKLKYPLRDLFKKRNETGLEPLDISKNTQTFILTIFS
HHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
GAIATYEDS
CCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA