| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473970
Identifier: 113473970
GI number: 113473970
Start: 63117
End: 63416
Strand: Reverse
Name: 113473970
Synonym: Tery_0040
Alternate gene names: NA
Gene position: 63416-63117 (Counterclockwise)
Preceding gene: 113473972
Following gene: 113473969
Centisome position: 0.82
GC content: 35.0
Gene sequence:
>300_bases ATGAGAAAATCATCTAAATCTAAAGGTCGTCTGGTTTGGAATCATTCAACCCATATTGAAGGCTTAATACGAATTTTAGA TAAATTAACCCAACATAAGGGTATTGAAACTGTTACTCCAGGGGTTATCGGCAGATCCAAAAGTCATATTCCCCACATAA AGCTAAAAATATCAGTGCCTATTCGTGGTGGTTTTAAACTTATTGCCAGACAAGGAAAGACAGTTCAAGAAGTATTTATT TTAACGAGCTTAACTCAAGAAGACTTAGAAAAGTTAATCACTCAAGTCTTGGCCAAGTAA
Upstream 100 bases:
>100_bases AGTTAATCTGCTGCAACTATTGCCCATTTTCTGCCCTCACTCTTCAGCTTTTTCAGCAAACCCTAGATTAAACTAGGTAT GTAGAGAAGGAGAAAATCCG
Downstream 100 bases:
>100_bases ATATACTCCATTGTCCTATTAAGAAGTATTTATTTTAACGAGCTTAACTCAAGAAAACTTAGAGAAGGTAATCACTCAAG TCTTGGCCAAGTAAATATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MRKSSKSKGRLVWNHSTHIEGLIRILDKLTQHKGIETVTPGVIGRSKSHIPHIKLKISVPIRGGFKLIARQGKTVQEVFI LTSLTQEDLEKLITQVLAK
Sequences:
>Translated_99_residues MRKSSKSKGRLVWNHSTHIEGLIRILDKLTQHKGIETVTPGVIGRSKSHIPHIKLKISVPIRGGFKLIARQGKTVQEVFI LTSLTQEDLEKLITQVLAK >Mature_99_residues MRKSSKSKGRLVWNHSTHIEGLIRILDKLTQHKGIETVTPGVIGRSKSHIPHIKLKISVPIRGGFKLIARQGKTVQEVFI LTSLTQEDLEKLITQVLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11113; Mature: 11113
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSSKSKGRLVWNHSTHIEGLIRILDKLTQHKGIETVTPGVIGRSKSHIPHIKLKISVP CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC IRGGFKLIARQGKTVQEVFILTSLTQEDLEKLITQVLAK CCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MRKSSKSKGRLVWNHSTHIEGLIRILDKLTQHKGIETVTPGVIGRSKSHIPHIKLKISVP CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC IRGGFKLIARQGKTVQEVFILTSLTQEDLEKLITQVLAK CCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA