| Definition | Frankia alni ACN14a chromosome, complete genome. |
|---|---|
| Accession | NC_008278 |
| Length | 7,497,934 |
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Identifier: 111222429
GI number:
Start: 3287098
End: 3290703
Strand: Reverse
Name: Not Available
Synonym: FRAAL3011
Alternate gene names: NA
Gene position: NA
Preceding gene: 111222434
Following gene: 111222428
Centisome position: NA
GC content: NA
Gene sequence:
>3606_bases ATGGTCCGGATCCGAGTGCTCGGCCCGCTGGCGGTCGAGGTGGGCGGGCGCGCCGTCACCCTGGGCGGACCACGCCAGCG GGCGGTCCTCGCCCGGCTCGTCGTCGCCCGCGGCGAGCTCGTCTCGGTGGACAGGCTGATCGAGGACCTGTGGCGCGGCG AACCACCGGCCAAGGCCGTGACCTCGCTGCAGTCCTACGTCTCCAATCTGCGCAGGCTGCTGGAGCCGCAACGGCCCCCG CGGACACCTGCGACGGTCCTGCTCAGCGCGAGCCCCGGCTACGCCCTCGCGCTCGGCCCGGAGGCGGTGGACGCCTGGCG GTTCGAGTCGCTGCTGCGCGAGGCCCGCCGGCACTCCTCCGCCGGCACCGCCCGGGCGCTGATCTCCGAGGGCCTGTCAC TGTGGCGCGGCGAGGCCTTCGGCGAGGTCGCCGACGAGTCGTGGGCGACCGCCGACATCGCCCGGTTGGCGGAGCTACGC GCCGAGGCACGGCAGATGCTCGCCGCCGCCGAGCTGCGCGCGGGCAACCTGGCCGCCGCCGTGCGGCTCGCGGACGCGCT CACCCGGCGCGAGCCCCTGCGGGAGGAGGGCTGGCGCCTGCTGGCCCTGTCCCTCTGGGGCGGCAACCGGCAGGCCGACG CCCTCGACGCGCTGCGCCGGGCCCGTCGACAGCTCACCGAGGAGCTCGGCCTGGACCCGGGACCCGAACTCGCCCGGCTG GAGGAGGCGATCCTCCGGCAGAACCGCGAGCTCCTCGACGCGGCGATGCCCCCCTCGGCGCCGACCTCTGCGCCCCCCTC TGCGCCCCCCTCCGAGCCACCCGGATCCTCGCAACCGGACGGCTCGTCTCCACCCCTTCCAGCCGCCGCTTCGGCCGCCG AGCTGTTCGCCGGTCGCGAGCAGGAGCTCGCCGCGCTGGCGGACGTCGCCGCCGAGGTCACAGCCGCCGAGGTCAGAGCC GCCGGCGTCGGCGCAGGCCGGGCGAGGATCGCCCTGATCAGCGGCGAGCCGGGAGCCGGGAAATCGGCGCTGTTGCGGCA GGTGCGCCACCGGCTGGCCACGACCGGATGGCTGGTCGTCACCGGGCAGTGTCCCGAGGCCGAGGGTGCTCCGCCGGCCT GGGCGTGGTTGCAGGCCCTGCGGGTGCTGGCCGACGCCGCTCCCCCGCCGGCGCCGCTGGCCGAGCTCCTTGCACCCCTC CTGTCGGACCAGCGGCCCGACCATCCACCCGGCCCCACGCCCGGCCACGATCTCGGCAGCGATCTCGGCCGCGCAGTCGG CCATCGGCCCGGCCAGAAGTCCACGGACACGGACCGCCTGGACCGCGTCGACGCCTCCGCCGGCCGGTTCCGACTCCACC AGGCCGTCCTCGCCTGGCTGCGCACCGTCGCCGATCGGACGCCGGCGGAACCGCTGGCGATCATCCTGGACGATCTGCAC TGGGCCGACGCGGAGACCCTGGCGCTGCTCGGCGCGGTGGCCGCGCAGGTGACCGACGCGCCGATCCTGCTGCTGGTGGC CTACCGCGACGGGGAGGTCGGCCCGGCCCTGACCGAGGCACTCGCCGGGCTGGCCGCCCGGTCACCACGGCGCCTGGCGT TGGGTGGGCTGTCGCGGGCGGCGATCGCCGACGTCGTCGGCGCGGTCTGCCGGCGGCCCGTCGACGCCGACACCGTGCTC GCCCTCGCCGAACGCACCGGGGGAAACCCGTTCCACGTGCGGGAGAGCGCACGCCTGCTCGCCAGCGAAGGGGCGCTCGT CGCGCTGTCCGAGGTGCCGGACGGCGTGCGTGACGTGCTGCGCCGGCGGCTCGCGCGCCTGCCCGCGGCGTCGGTGGCGG TGCTGCGCCTGGCCGCCGTCGCCGGCCGGGAGGCCGACGTCGAGGTGCTCATCGACGCGGCCAACACCGACGAGGACGGC GTACTCGACGCCCTGGACGCCGGGCTCATCGCCGGCCTGCTCACCGAGCCCGCGCCGGGTCGGGTCCGGTTCACCCACGC CCTCGTCCGGGACACCCTGAGCACCGACCTCAGCCTGCTGCGCCGCACGCGCATGCACGCCAGGCTCGGTGCCACCCTCG AACGGCTGCAGCCCGACAACACCCCCGCGCTGGCCCACCACTACCTGCGGGCCGCCTCGGCGGCGACGGCACGCCGCGCC GTCGACTACGCGGTCCGAGCCGCGCAGGCCGCCGAGCGCCGCTACGCCCACGACACGGCGGCCGACCTGCTCGCGGGCGC GGTCGACGGCTTCGACCGCCTTCCCGTCGGCGACCACGCCTGCGGCGAGACCGATCGCGACGCCGAACGGGTGCTGCTGC TCGGCCGGCTGCTGCGGGCGCAGGTGCGCGCCGGCGCGGTGGCGGCCGCACGCGCCTGCCGGCAACGGGCCGTCGATCAC GCCGAGGCGGCCGGTCGCGAGGACCTGCTGATCGCCGCCTTCACCGCCTGGACGGACCCCACTCCCTGGCAGAGCCGGCC GTACGGGACCGTGGACGCGCCCGTCGTCGCGGTGCTCACCCGCCTGCTCGAGCGGCCCGGTCTCGACGCCACCGTGCGCT GCCGGCTGTTGGACGCCCTGACCACCGAGCTCGCCGGGGAGGACGACGCCCGGCCCCGCCGGGCCGCCGAGGAGGCGGTG GCGCTGTCCGCGACCCAGGACGATCCCGCCCTGCGCGCGCTCGCCCTCACCGCGCTGGCCCGGGTGCGCAACCACGAGCC CGACTGGCCGGAGCGGGACCGGGTCGGCCAGGAGCTGATCGAGATCGGTGTCGCGTACGACCTGCCCGCCTACCGCTCCT TCGGCAACTTCGCCCGGGCCATCGCGGCGGTCGCCGACTCCGACGTCACCGGCGTCCGGCGCTTCGTCGCCGACGGGATG CACCTCGCCCGCCTGTACCGGATGCCGGAGGCCGAGGGCGTCGGGGCCTACGGGCAGGCGATGCTCGCGCACATCGCCGG CGACCTCGACGACGCCGAGCGTCGCTACACCGAGACGAGCGCCCGGATGCTGCGCCACGGGTCGATCCACGCCGCCGGCT TCCAGCTGCTGGCCGTCGCGACGCTGCGCCTGACGCAGGGCCGAATGGCCGAGTTCGCCGCGCACGCCGACGATCTGCTG GCCGCGCACGGACCGGTCATGATCGACCTGCTCACGCTCGCGCTGGCCCGCGACGGACGGCTGGCCGAGGCCACTCGCCT GCACGCCGCAGCCCCGCCCCTGCGGCCCGACTTTCTCTTCTCCACCCTCGCCGTCCTGCGTGCCGAGGCGGCCATCGCCG TCGCGGACCGCCCGCTCGCCCGCGCGATGTACGGCGCGCTGCTGCCGCTGCGCGGGCAGGTGCCCGGCGCCCTGAGCCTG TCGCTGGCGCTGCGGCCGGTCGCCCACACCCTCGGCGCCCTCGCCGCCTTCCTCGGCCGGTACCCCGACGCCGCCGACCA CTTCCGGCAGGCGCGCACGGTCGCCGAACGCTGGGGTGCCACCCACTGGGCCGACGAGGCCCGCCGCGCCCTCGCCGCGA TCACCACCACCGCGATGACCACCACCGCGGGGACCACAACCGCGGGGACCGCCACCGGGGGGACCGGGACCGAGGAGTTC CCGTGA
Upstream 100 bases:
>100_bases GGAGTGCTCGTGGAGCTGAGTTGGAGCCGTCTCGCCCCTTCGCCGGTCCGCCGGTTCACCGGAGGAACCGGACCGGCCGG ATGGCTAGGATCGGTGGGCG
Downstream 100 bases:
>100_bases TCGACACCCAGCGGTTCGCGTCCTTCCTGCTGGTCGTGGCCACGCTGATCGTGCTGCCCGGGCCGAGCGTGCTCTTCGTC GTCAGCCGGGGTGTCTCGCT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1201_residues MVRIRVLGPLAVEVGGRAVTLGGPRQRAVLARLVVARGELVSVDRLIEDLWRGEPPAKAVTSLQSYVSNLRRLLEPQRPP RTPATVLLSASPGYALALGPEAVDAWRFESLLREARRHSSAGTARALISEGLSLWRGEAFGEVADESWATADIARLAELR AEARQMLAAAELRAGNLAAAVRLADALTRREPLREEGWRLLALSLWGGNRQADALDALRRARRQLTEELGLDPGPELARL EEAILRQNRELLDAAMPPSAPTSAPPSAPPSEPPGSSQPDGSSPPLPAAASAAELFAGREQELAALADVAAEVTAAEVRA AGVGAGRARIALISGEPGAGKSALLRQVRHRLATTGWLVVTGQCPEAEGAPPAWAWLQALRVLADAAPPPAPLAELLAPL LSDQRPDHPPGPTPGHDLGSDLGRAVGHRPGQKSTDTDRLDRVDASAGRFRLHQAVLAWLRTVADRTPAEPLAIILDDLH WADAETLALLGAVAAQVTDAPILLLVAYRDGEVGPALTEALAGLAARSPRRLALGGLSRAAIADVVGAVCRRPVDADTVL ALAERTGGNPFHVRESARLLASEGALVALSEVPDGVRDVLRRRLARLPAASVAVLRLAAVAGREADVEVLIDAANTDEDG VLDALDAGLIAGLLTEPAPGRVRFTHALVRDTLSTDLSLLRRTRMHARLGATLERLQPDNTPALAHHYLRAASAATARRA VDYAVRAAQAAERRYAHDTAADLLAGAVDGFDRLPVGDHACGETDRDAERVLLLGRLLRAQVRAGAVAAARACRQRAVDH AEAAGREDLLIAAFTAWTDPTPWQSRPYGTVDAPVVAVLTRLLERPGLDATVRCRLLDALTTELAGEDDARPRRAAEEAV ALSATQDDPALRALALTALARVRNHEPDWPERDRVGQELIEIGVAYDLPAYRSFGNFARAIAAVADSDVTGVRRFVADGM HLARLYRMPEAEGVGAYGQAMLAHIAGDLDDAERRYTETSARMLRHGSIHAAGFQLLAVATLRLTQGRMAEFAAHADDLL AAHGPVMIDLLTLALARDGRLAEATRLHAAAPPLRPDFLFSTLAVLRAEAAIAVADRPLARAMYGALLPLRGQVPGALSL SLALRPVAHTLGALAAFLGRYPDAADHFRQARTVAERWGATHWADEARRALAAITTTAMTTTAGTTTAGTATGGTGTEEF P
Sequences:
NA
Specific function: NA
COG id: COG3629
COG function: function code T; DNA-binding transcriptional activator of the SARP family
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA