Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 111022724

GI number:

Start: 6189629

End: 6193276

Strand: Direct

Name: Not Available

Synonym: RHA1_ro05760

Alternate gene names: NA

Gene position: NA

Preceding gene: 111022723

Following gene: 111022725

Centisome position: NA

GC content: NA

Gene sequence:

>3648_bases
TTGTCTTCCCCGCTCATCGCTGCCGAGCCCTCGTCCGACACCCCGCTCGCCGGTCTGGCGAAGATCGCGCTGGGCGACGC
AGTCATCGCGCAGGTGACCGAGGCTCTCGGACGCCATCACCTCGACATCGTCGCGCCCGGACCCGCCCGGCCGTTCGTGG
CCGCGGCCCTCGCCGAGCGCACCCATCTGCTGCTGGTCACCGCGACCGGCCGCGAGGCCGACGACCTCACCGCCGAACTG
CGGGAGATGATCGGCGACGCCGTCGCGCAGTTCCCGTCGTGGGAGACGCTGCCGCACGAACGGCTGTCGCCGAGCGCCGA
CACGGTCGGTCGCCGGGTGGAGGTGCTCCGCAGACTCGCGCGGCCGGACGACCGCTCGTACGGGGCGCCGCTCCAGGTCA
TCGTCACCACCGTCCGGTCGCTGGTGCAGCCCATGGCGCCGGGACTCGGTGAGATCGAACCCGTCACGCTGCGCGTGGGC
GTCGAGCACGACTTCGACGGGCTGATCCAGCGGCTCGTCGAAATGGCGTACACGCGCGTCGACATGGTGGGCAAGCGCGG
CGAGTTCGCCGTCCGCGGCGGCATCCTGGACCTGTTCTCGCCCACCGCGGATCATCCCGTGCGCGTCGAGTTCTGGGGCG
ACGAGGTCACCGAACTGCGCGCGTTCTCCGTCGCGGACCAGAGGTCGCTGCCCGAACTCGACATCGACGCGGTGATCGCC
CCGCCGTGCCGCGAACTGCTCCTCACCGAGGACGTCCGCGACCGGGCCGCGCAGCTCGCGGTCGACAACCAGGCCGACGC
CGCGCTCGTCGAGATGCTCGACAAGATGTCGGCCGGCATCCCGGTGGAAGGCATGGAGGCACTGCTGCCCGTGCTGCGGC
CGGGGCAACTGCAGTTGCTCACCGACGTGCTGCCCGAGAGCGCACACGTGCTGCTGTGCGATCCGGAGAAGATCCGGACG
CGCGCCACCGACCTGGTGCGCACCGGTCAGGAGTTCCTCGAGGCGTCGTGGACGGCGGCCTCGATCGGCGGCGCCGCCCC
GCTCGACACCTCGGTGCTGAGGGGTGACGGAATCGATCTCGGCGCCTCCGCCTACCGCTCGCTCAGCCAGGTCCGTGAAT
CCGCGGAGGCCAGGGGCCTGCCGTGGTGGACGCTGAGCCCGCTCGCGTCGGGCAACGGCGAGGAACTGGAGCTGGCGGTC
ACGCCGGCACCGCAGGTCCGTGGGTCCGACGACCTGCTGTCGGAACTGTTCGTGAGTCTGCGCGCCCACGTCACCACCGG
CGGGCGCGCCGTCATCGTGGTCGCGGGCGCCGGCACCGCGCATCGCGTGCTCGAGCGTCTGCGCGAGGCCGAGGTGCCCG
CGGCTGAACTCGCGCCCGGCACCGAGCCCCCGCGGGGCCAGGTCGGGGTGCTGCGCGGTTCGCTCCACGACGGCCTGGTC
TTCCCCGGCGACGACTCCACTGCCGGACTCGTCATCGTCACGGAGGCCGATCTCACCGGCAACCGGGTGGCCGCGGTCGG
CGACGGCAAGAGGCTGCCGGCGAAGCGCCGCAACCAGGTGGACCCGCTGGCCCTGACCGCCGGGGACATGGTGGTGCACG
ACCAGCACGGCATCGGACGATTCGTCGAGATGGTCGAACGCACCATCGGCGGCGCCCGCCGCGAGTACCTGGTGATCGAG
TACGCCGCCAGCAAGCGCGGACACCCGGGCGACCGTCTGTTCGTTCCGATGGAGTCGCTCGACCAGTTGTCGCGGTACGT
CGGCGGCGAGTTGCCCGCGCTCAGCAAGCTCGGCGGTTCCGACTGGGCCAACACCAAACGCAAGGCGCGCAAGGCGGTTC
GTGAGATCGCCGGTGAGCTCGTCCAGCTGTACGCGGCGCGGCAGGCCGCACCCGGACATGCGTTCGGCCCGGACACCCCG
TGGCAGAAGGAGATGGAGGACGCGTTCGCGTTCACCGAGACCCACGACCAGCTGACGGTCATCAGCGAGGTCAAGGCCGA
CATGGAGAAGGCGGTCCCGATGGACCGCGTCGTCATCGGGGACGTCGGCTACGGCAAGACCGAGATCGCGGTGCGGGCGG
CGTTCAAGGCGGTGCAGGACGGCAAGCAGGTGGCCGTCCTGGTGCCGACGACGCTGCTCGCTCAGCAGCACCTGCAGACG
TTCACCGAGCGCATGGCCGCGTTCCCGGTGACGGTGCGCGGGCTCTCCCGCTTCACGGATGCGGGAGACTCCAAGGAGAC
CATCGCCGGCATGGCCGACGGCGAGATCGACGTCGTGGTCGGCACGCACCGGCTGCTGCAGACCGGGATCCGGTGGAAGG
ACCTGGGCCTCGTCATCGTCGACGAGGAACAGCGCTTCGGTGTGGAACACAAGGAGCACATCAAGGCCCTGCGCACCCAC
GTGGACGTTCTCACGATGTCGGCCACGCCGATCCCGCGAACGCTGGAGATGAGCATGGCGGGCATCCGCGAGATGTCCAC
GATCCTCACGCCGCCGGAGGAACGGCACCCCATCCTCACCTACGTCGGCGCGTACGCCGACAAGCAGGTGGCGGCGGCCA
TCCGACGGGAACTGCTCCGCGACGGGCAGGTGTTCTACGTCCACAACCGGGTCAGCTCGATCGACAAGTCGGCCCAGCGG
ATCCGCGAACTCGTCCCCGAGGCGCGGGTCGTGGTGGCACACGGGCAGATGAACGAGGACACCCTGGAACGGACCGTGCA
GGGCTTCTGGGAACGCGACTACGACGTGCTGGTGTGTACCACCATCATCGAGACGGGTCTCGACATCTCCAACGCCAACA
CGCTCATCGTCGAACGCGCCGATTCCCTCGGCCTGTCGCAGCTGCACCAGTTGCGCGGGCGCGTCGGGCGGAGCCGGGAA
CGCGGCTACGCGTACTTCCTGTACCCGCCGGAGAAGCCGCTCACCGAGACTGCCTACGACCGCCTCGCGACCATCTCACA
GAACTCCGACCTCGGTGCCGGCATGGCGGTCGCGATGAAGGACCTCGAGATCCGCGGCGCCGGAAACGTGCTGGGCGCCG
AGCAGTCCGGTCACGTCGCGGGTGTCGGGTTCGACCTGTACGTGCGGCTGGTAGGGGAGGCGGTCGAGGCGTTCCGGGCG
GCGGCCGACGGCAGGCCGATCACGACGGAGGACGCCCCGAAGGAGGTCCGTATCGACCTGCCCGTCGACGCGCACATCCC
TCCCGACTACGTCACCAGCGACCGCCTCCGGCTCGAGGGCTACCGCAAGCTCGCGGCGGCCACCGAACTCGACGGCATCA
CGGCCGTGGTCGACGAACTCGCCGACCGGTACGGACCGCTGCCCGAAGAGGTCCGCCGACTGGTCTCGGTGGCCAAGCTG
CGCCTGCTGGCCCGCGAGTACGGACTCGAGGAGATCGCCGTGGTCGGGACGCAGCTGAAGATCGCACCGATGGCCCTGCC
CGACTCGAAGCAGTTGCGCCTCAAGCGGATCTACCCGAGCGCCCAGTACCGTGCCACCACCGGAATGGTGCAGCTGCCGC
TGCCCCGGGCGGGGTCGGGCGGAATCGGCGCGGAGCGGGTGCGTGACGTGGAGTTGTTGCAGTACATCGCCGACTTCGTG
GTCGCGCTGGACGGCAAGGCCGCCGGGTCCGTGGTGATGGAGGCCTGA

Upstream 100 bases:

>100_bases
GTGTGCGATATCGACTAGGCTGGCTCAGTCCGCAACTGGCCGCTCGTCCCGGCCCGAGCTGTTCGCCGGCAGTTCGTCAT
CACTGCTCAGGAGTGCGTCG

Downstream 100 bases:

>100_bases
CCCGATGACGGTGGTCCTGCTCGACCCGTTGCGGCCGACGACGATCCCGATGGAGGCCGTCGGGGTGGTCGGTGACGGGG
TGGAGTTCACCGACGAGGTA

Product: transcription repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1215_residues
MSSPLIAAEPSSDTPLAGLAKIALGDAVIAQVTEALGRHHLDIVAPGPARPFVAAALAERTHLLLVTATGREADDLTAEL
REMIGDAVAQFPSWETLPHERLSPSADTVGRRVEVLRRLARPDDRSYGAPLQVIVTTVRSLVQPMAPGLGEIEPVTLRVG
VEHDFDGLIQRLVEMAYTRVDMVGKRGEFAVRGGILDLFSPTADHPVRVEFWGDEVTELRAFSVADQRSLPELDIDAVIA
PPCRELLLTEDVRDRAAQLAVDNQADAALVEMLDKMSAGIPVEGMEALLPVLRPGQLQLLTDVLPESAHVLLCDPEKIRT
RATDLVRTGQEFLEASWTAASIGGAAPLDTSVLRGDGIDLGASAYRSLSQVRESAEARGLPWWTLSPLASGNGEELELAV
TPAPQVRGSDDLLSELFVSLRAHVTTGGRAVIVVAGAGTAHRVLERLREAEVPAAELAPGTEPPRGQVGVLRGSLHDGLV
FPGDDSTAGLVIVTEADLTGNRVAAVGDGKRLPAKRRNQVDPLALTAGDMVVHDQHGIGRFVEMVERTIGGARREYLVIE
YAASKRGHPGDRLFVPMESLDQLSRYVGGELPALSKLGGSDWANTKRKARKAVREIAGELVQLYAARQAAPGHAFGPDTP
WQKEMEDAFAFTETHDQLTVISEVKADMEKAVPMDRVVIGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHLQT
FTERMAAFPVTVRGLSRFTDAGDSKETIAGMADGEIDVVVGTHRLLQTGIRWKDLGLVIVDEEQRFGVEHKEHIKALRTH
VDVLTMSATPIPRTLEMSMAGIREMSTILTPPEERHPILTYVGAYADKQVAAAIRRELLRDGQVFYVHNRVSSIDKSAQR
IRELVPEARVVVAHGQMNEDTLERTVQGFWERDYDVLVCTTIIETGLDISNANTLIVERADSLGLSQLHQLRGRVGRSRE
RGYAYFLYPPEKPLTETAYDRLATISQNSDLGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAFRA
AADGRPITTEDAPKEVRIDLPVDAHIPPDYVTSDRLRLEGYRKLAAATELDGITAVVDELADRYGPLPEEVRRLVSVAKL
RLLAREYGLEEIAVVGTQLKIAPMALPDSKQLRLKRIYPSAQYRATTGMVQLPLPRAGSGGIGAERVRDVELLQYIADFV
VALDGKAAGSVVMEA

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA