Click here to switch to the map view.

The map label for this gene is gidA

Identifier: 110835598

GI number: 110835598

Start: 3092795

End: 3094690

Strand: Reverse

Name: gidA

Synonym: ABO_2737

Alternate gene names: 110835598

Gene position: 3094690-3092795 (Counterclockwise)

Preceding gene: 110835602

Following gene: 110835597

Centisome position: 99.18

GC content: 57.28

Gene sequence:

>1896_bases
ATGGATTTTTCCCAGCGATTTGGCGTGATTGTGATTGGCGGCGGCCATGCCGGAACCGAAGCGGCACTGGCATCCGCACG
TATGGGCGTTTCCACGCTGTTGCTTACTCACAACATTGAAACCCTGGGTCAGATGAGCTGTAACCCAGCCATCGGCGGCA
TCGGCAAGAGTCATCTAGTCCGTGAAATTGATGCTTTGGGCGGGGCCATGGGCCGTGCCACTGATAAAGGCGGTATCCAG
TTTCGCGTCCTCAATGCCCGTAAAGGCCCAGCAGTGCGCGCCACTCGTGCCCAAGCCGATCGGGAACTCTATAAGGCCGC
CATCCGCGGCACCCTGGAAAACCAGCCCAACCTGACCCTGTTTCAGCAAGCGGTGGACGACCTGGTGGTGGAAAACGGTC
GCTGTGTGGGTGTGGTCACTAACATGGGCCTGCGTTTCATGGCCGACGCGGTGGTACTCACCGCTGGCACCTTCCTGGGC
GGTGTGATCCATATTGGCCTGGATAACCATCAGGGCGGGCGCGCCGGTGACCAGCCGTCTAATGCACTGGCATGCCGTTT
ACGTGAACTGCCGTTTCGGGTTGATCGTCTAAAAACGGGTACGCCGCCGCGGATTGACGGCAAGAGCGTGGATTTTTCGG
TGATGGAAGAGCAGTGGGGGGATAACCCGCTGCCAGTGATGAGCTACTTGGGTAAGGTGGAGGAGCATCCGCAGCAAGTG
TGCTGCTACATCACCCATACCAATGCGCAGACCCACGACATTATCCGCAGTGGTTTTGATCGCAGCCCCATGTTCACCGG
AGTTATCGATGGGGTGGGGCCGCGTTATTGTCCGTCCATCGAAGACAAGGTAAACCGCTATCCGGACAAAGACAGCCATC
AGATTTTCGTGGAACCGGAAGGGCTCAATACCCACGAGTTATATCCTAACGGCATTTCCACCAGCCTGCCGTTTGATGTG
CAGCTGCAGGCGGTGCGCTCCATCCGCGGCTTTGAAAACGCCCATATCACCCGCCCTGGTTATGCCATCGAATACGATTA
TTTTAATCCCCAGGACCTCAAGCACAGCCTGGAAACTCAGCATATGCCGGGGCTATTCTTTGCCGGCCAGATCAATGGCA
CGACCGGTTACGAAGAAGCGGGCGCCCAGGGATTGCTGGCGGGCCTGAACGCGGCCCGGCTGAGTCAGGGTAAAGACGCC
TGGACCCCCCGCCGCGATGAAGCCTATATAGGCGTACTGGTGGATGACCTGATTACCATGGGGACTCAAGAGCCCTACCG
CATGTTCACTAGCCGCGCCGAATACCGGTTGTTGCTGCGTGAAGACAACGCGGATCTGCGCCTCACAGAGAAGGGCCGTG
AGCTGGGATTGGTGGGTGACGAACGTTGGGCGGCCTTCAACGCCAAACGTGACGGCATGGCCAGCGAAGAGCAGCGTCTT
AAAACCACCTGGGTGCGGCCAAAAACGCCAGAAGCCGAGGCGGTGAATGCGTTAATCGAAAAGCCGTTGACTCATGAATA
CAATTTGCTCGACCTGCTCAAGCGCCCTGAGCTGACCTACGCCAATTTAGCGGAAGCGGTGGCGCTGGCGGACCGCCCGG
ATAGTGCAGTCATTGAGCAGATGGAAATTCTTGCCAAGTACGCAGGCTATATTGATCGTCAGGCAGACGAAATCGAAAAA
CTGCGGGCCGCAGAAACCACCGCCCTGCCGGTGGAATTTGATTATGGCCAGGTAAAAGGCCTATCCAATGAGGTGAAGCA
AAAGCTCAGCGAGATTCGTCCGCAGACCTTGGGCCAGGCGGGCCGCATTCCCGGCGTCACCCCGGCGGCTATTTCCTTAC
TGATGATTTACCTGAAAAAACATCACCATCAAAAGAAGGCCGCCCAACAAGCATGA

Upstream 100 bases:

>100_bases
CTATTGCGAGAGGCTTGCAGCGTGAAGCGTACTCTCTATACTAGCGCGCCCGGTTGACTATATTTTGAGCAGCAGGCCAG
CCCTGCAAGGTAAGTGCAGC

Downstream 100 bases:

>100_bases
GTCTTTCCAGCACTCTGACCCAGGGAATTGATGCCCTTGGCCTTTCCTTGAGCGACGATCAGCAGCGCTTGTTACTCGCG
TATGTGGATCTGTTGGTTAA

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MDFSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVREIDALGGAMGRATDKGGIQ
FRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTLFQQAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLG
GVIHIGLDNHQGGRAGDQPSNALACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQV
CCYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGLNTHELYPNGISTSLPFDV
QLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHMPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDA
WTPRRDEAYIGVLVDDLITMGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRL
KTTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQMEILAKYAGYIDRQADEIEK
LRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQAGRIPGVTPAAISLLMIYLKKHHHQKKAAQQA

Sequences:

>Translated_631_residues
MDFSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVREIDALGGAMGRATDKGGIQ
FRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTLFQQAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLG
GVIHIGLDNHQGGRAGDQPSNALACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQV
CCYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGLNTHELYPNGISTSLPFDV
QLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHMPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDA
WTPRRDEAYIGVLVDDLITMGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRL
KTTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQMEILAKYAGYIDRQADEIEK
LRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQAGRIPGVTPAAISLLMIYLKKHHHQKKAAQQA
>Mature_631_residues
MDFSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLVREIDALGGAMGRATDKGGIQ
FRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTLFQQAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLG
GVIHIGLDNHQGGRAGDQPSNALACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQV
CCYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPEGLNTHELYPNGISTSLPFDV
QLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQHMPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDA
WTPRRDEAYIGVLVDDLITMGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRL
KTTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQMEILAKYAGYIDRQADEIEK
LRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQAGRIPGVTPAAISLLMIYLKKHHHQKKAAQQA

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=641, Percent_Identity=44.9297971918877, Blast_Score=501, Evalue=1e-141,
Organism=Homo sapiens, GI19882217, Length=666, Percent_Identity=43.2432432432432, Blast_Score=487, Evalue=1e-137,
Organism=Homo sapiens, GI183227703, Length=681, Percent_Identity=42.2907488986784, Blast_Score=481, Evalue=1e-136,
Organism=Escherichia coli, GI2367273, Length=629, Percent_Identity=67.4085850556439, Blast_Score=874, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17534255, Length=626, Percent_Identity=41.0543130990415, Blast_Score=453, Evalue=1e-127,
Organism=Saccharomyces cerevisiae, GI6321202, Length=621, Percent_Identity=45.0885668276973, Blast_Score=499, Evalue=1e-142,
Organism=Drosophila melanogaster, GI24658174, Length=633, Percent_Identity=46.4454976303318, Blast_Score=512, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_ALCBS (Q0VKW3)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694457.1
- ProteinModelPortal:   Q0VKW3
- SMR:   Q0VKW3
- STRING:   Q0VKW3
- GeneID:   4211697
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2737
- NMPDR:   fig|393595.12.peg.2746
- eggNOG:   COG0445
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- PhylomeDB:   Q0VKW3
- ProtClustDB:   PRK05192
- BioCyc:   ABOR393595:ABO_2737-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 69449; Mature: 69449

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: BINDING 125-125 BINDING 180-180 BINDING 370-370

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLV
CCCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHH
REIDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTL
HHHHHHCCHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQQAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGLDNHQGGRAGDQPS
HHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
NALACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQV
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCE
CCYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPE
EEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
GLNTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHC
HMPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDAWTPRRDEAYIGVLVDDLITM
CCCCEEEEEEECCCCCCHHHCCHHHHHCCCHHHHCCCCCCCCCCCCCCEEHHHHHHHHHC
GTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRL
CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHHH
KTTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQ
HHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
MEILAKYAGYIDRQADEIEKLRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHCCHHHHCCC
GRIPGVTPAAISLLMIYLKKHHHQKKAAQQA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFSQRFGVIVIGGGHAGTEAALASARMGVSTLLLTHNIETLGQMSCNPAIGGIGKSHLV
CCCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHH
REIDALGGAMGRATDKGGIQFRVLNARKGPAVRATRAQADRELYKAAIRGTLENQPNLTL
HHHHHHCCHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQQAVDDLVVENGRCVGVVTNMGLRFMADAVVLTAGTFLGGVIHIGLDNHQGGRAGDQPS
HHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
NALACRLRELPFRVDRLKTGTPPRIDGKSVDFSVMEEQWGDNPLPVMSYLGKVEEHPQQV
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCE
CCYITHTNAQTHDIIRSGFDRSPMFTGVIDGVGPRYCPSIEDKVNRYPDKDSHQIFVEPE
EEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
GLNTHELYPNGISTSLPFDVQLQAVRSIRGFENAHITRPGYAIEYDYFNPQDLKHSLETQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHC
HMPGLFFAGQINGTTGYEEAGAQGLLAGLNAARLSQGKDAWTPRRDEAYIGVLVDDLITM
CCCCEEEEEEECCCCCCHHHCCHHHHHCCCHHHHCCCCCCCCCCCCCCEEHHHHHHHHHC
GTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRELGLVGDERWAAFNAKRDGMASEEQRL
CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHHH
KTTWVRPKTPEAEAVNALIEKPLTHEYNLLDLLKRPELTYANLAEAVALADRPDSAVIEQ
HHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHH
MEILAKYAGYIDRQADEIEKLRAAETTALPVEFDYGQVKGLSNEVKQKLSEIRPQTLGQA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHCCHHHHCCC
GRIPGVTPAAISLLMIYLKKHHHQKKAAQQA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA