Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is parA [C]

Identifier: 110835596

GI number: 110835596

Start: 3091323

End: 3092120

Strand: Reverse

Name: parA [C]

Synonym: ABO_2735

Alternate gene names: 110835596

Gene position: 3092120-3091323 (Counterclockwise)

Preceding gene: 110835597

Following gene: 110835595

Centisome position: 99.1

GC content: 55.14

Gene sequence:

>798_bases
GTGACCACCGTATTTGCCGTAGCCAATCAGAAAGGCGGCGTGGGCAAGACCACCAGCAGTGTGAATCTGGCGGCGTCGCT
GGCGGCCACCCGCAAGAAGGTGATGCTCGTGGACATTGATCCACAGGGCAATGCCACCACCGGGTCAGGCGTAGATAAGT
TTGATACCGATTACACTATTTATGATGTGCTGTGCGATGACGTGGCTATCGAGCAGGCGGTGACGGACACCCCGGAAGAT
TCTGGGTTTGATCTGATCGCCGCCAATGGTGATTTGACCGCGGCTGAGGTTCAGTTGTTGGACATGAGTGCTAAGGAGTT
TCGTTTGCGTAACGCCTTAGCGCGAGTCCGTGATCAGTACGATTACATCCTTATTGATTGCCCGCCGTCCCTGAACATGC
TCACCGTCAATGCGCTGACGGCGGCAGACTCAGTAATAGTGCCCATCCAGTGTGAGTACTACGCCTTGGAAGGCTTGACC
GCACTGATGAACACCATTGAGAAAATTCGCATGGTACTCAACCCGAAGCTGCACATCGGGGGTTTACTGCGCACCATGTA
TGACCCACGCAACAGCCTCTCCAATGATGTGTCCAACCAGTTAATTAGCCATTTCGGTGACAAGGTGTATCGCACCATTA
TTCCCCGTAACGTGCGGTTGGCGGAGGCGCCCAGTCATGGTGCGCCAGTGATTACCTATGATCCAAAATCCCGCGGTGCG
GTTAGCTATTTGGCGTTGGCCGGCGAGATTTTGCGCCGGGAGCAGGCCATCAAGGCCCAGCCTGTCGCAGCGTCATGA

Upstream 100 bases:

>100_bases
TGAGCCTCGCACCTTGGTGGTAGTGAATAAAGCTTGATAGTGAACGGGGGCCGTCAGGCACCCTGTCTCAAGCGTCAGGC
GTAAAATCAAGGAGAACGCA

Downstream 100 bases:

>100_bases
TGGCGGCATCCGGTAATATTTTTTTTGGCGGGCGGAGTGTGTCCGCAGCGTCAGGCGCCGAGCGTCTGGCGTCATGCGTA
TCATCAAGGATTAACCATGG

Product: ParA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPED
SGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLT
ALMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA
VSYLALAGEILRREQAIKAQPVAAS

Sequences:

>Translated_265_residues
MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPED
SGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLT
ALMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA
VSYLALAGEILRREQAIKAQPVAAS
>Mature_264_residues
TTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPEDS
GFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTA
LMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGAV
SYLALAGEILRREQAIKAQPVAAS

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28665; Mature: 28534

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTI
CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
YDVLCDDVAIEQAVTDTPEDSGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQY
EEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
DYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTALMNTIEKIRMVLNPKLHIG
CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHH
GLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCH
VSYLALAGEILRREQAIKAQPVAAS
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTI
CEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE
YDVLCDDVAIEQAVTDTPEDSGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQY
EEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
DYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTALMNTIEKIRMVLNPKLHIG
CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHH
GLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCH
VSYLALAGEILRREQAIKAQPVAAS
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]