| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is parA [C]
Identifier: 110835596
GI number: 110835596
Start: 3091323
End: 3092120
Strand: Reverse
Name: parA [C]
Synonym: ABO_2735
Alternate gene names: 110835596
Gene position: 3092120-3091323 (Counterclockwise)
Preceding gene: 110835597
Following gene: 110835595
Centisome position: 99.1
GC content: 55.14
Gene sequence:
>798_bases GTGACCACCGTATTTGCCGTAGCCAATCAGAAAGGCGGCGTGGGCAAGACCACCAGCAGTGTGAATCTGGCGGCGTCGCT GGCGGCCACCCGCAAGAAGGTGATGCTCGTGGACATTGATCCACAGGGCAATGCCACCACCGGGTCAGGCGTAGATAAGT TTGATACCGATTACACTATTTATGATGTGCTGTGCGATGACGTGGCTATCGAGCAGGCGGTGACGGACACCCCGGAAGAT TCTGGGTTTGATCTGATCGCCGCCAATGGTGATTTGACCGCGGCTGAGGTTCAGTTGTTGGACATGAGTGCTAAGGAGTT TCGTTTGCGTAACGCCTTAGCGCGAGTCCGTGATCAGTACGATTACATCCTTATTGATTGCCCGCCGTCCCTGAACATGC TCACCGTCAATGCGCTGACGGCGGCAGACTCAGTAATAGTGCCCATCCAGTGTGAGTACTACGCCTTGGAAGGCTTGACC GCACTGATGAACACCATTGAGAAAATTCGCATGGTACTCAACCCGAAGCTGCACATCGGGGGTTTACTGCGCACCATGTA TGACCCACGCAACAGCCTCTCCAATGATGTGTCCAACCAGTTAATTAGCCATTTCGGTGACAAGGTGTATCGCACCATTA TTCCCCGTAACGTGCGGTTGGCGGAGGCGCCCAGTCATGGTGCGCCAGTGATTACCTATGATCCAAAATCCCGCGGTGCG GTTAGCTATTTGGCGTTGGCCGGCGAGATTTTGCGCCGGGAGCAGGCCATCAAGGCCCAGCCTGTCGCAGCGTCATGA
Upstream 100 bases:
>100_bases TGAGCCTCGCACCTTGGTGGTAGTGAATAAAGCTTGATAGTGAACGGGGGCCGTCAGGCACCCTGTCTCAAGCGTCAGGC GTAAAATCAAGGAGAACGCA
Downstream 100 bases:
>100_bases TGGCGGCATCCGGTAATATTTTTTTTGGCGGGCGGAGTGTGTCCGCAGCGTCAGGCGCCGAGCGTCTGGCGTCATGCGTA TCATCAAGGATTAACCATGG
Product: ParA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPED SGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLT ALMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA VSYLALAGEILRREQAIKAQPVAAS
Sequences:
>Translated_265_residues MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPED SGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLT ALMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA VSYLALAGEILRREQAIKAQPVAAS >Mature_264_residues TTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTIYDVLCDDVAIEQAVTDTPEDS GFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQYDYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTA LMNTIEKIRMVLNPKLHIGGLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGAV SYLALAGEILRREQAIKAQPVAAS
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis soj [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28665; Mature: 28534
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTI CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE YDVLCDDVAIEQAVTDTPEDSGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQY EEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC DYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTALMNTIEKIRMVLNPKLHIG CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHH GLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCH VSYLALAGEILRREQAIKAQPVAAS HHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTVFAVANQKGGVGKTTSSVNLAASLAATRKKVMLVDIDPQGNATTGSGVDKFDTDYTI CEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE YDVLCDDVAIEQAVTDTPEDSGFDLIAANGDLTAAEVQLLDMSAKEFRLRNALARVRDQY EEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC DYILIDCPPSLNMLTVNALTAADSVIVPIQCEYYALEGLTALMNTIEKIRMVLNPKLHIG CEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHH GLLRTMYDPRNSLSNDVSNQLISHFGDKVYRTIIPRNVRLAEAPSHGAPVITYDPKSRGA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCH VSYLALAGEILRREQAIKAQPVAAS HHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]