| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ureE
Identifier: 110835579
GI number: 110835579
Start: 3075296
End: 3075826
Strand: Reverse
Name: ureE
Synonym: ABO_2718
Alternate gene names: 110835579
Gene position: 3075826-3075296 (Counterclockwise)
Preceding gene: 110835580
Following gene: 110835578
Centisome position: 98.58
GC content: 56.69
Gene sequence:
>531_bases ATGATCGAACTGACGAAAAAAATTACCGATACCGTCGCGCTGGAAAAAATCGATCCGGCGAGACTAAAAACCCTCAGCCT ACCGCTCGATGCACGGATCAAAAGCCGGCAAAAAGTGCAGCTGACATCCGGCGAAGGCGTGGGCCTATTCCTAGAGCGAG GCACCCTGCTTCGCGGTGGGGATGTGCTTACCAATGCAGACGGAGTGTTGGTCAAGGTGTTGGCCGCCAACGAAACCGTT TCCACCATTGTTTGCAGTGATGCACTGATGCTAACCAAGGTGGCCTATCACCTGGGCAACCGTCACGTTCCGCTGCAGAT CGAAACCGGCTTTGTTCGTTACCAGCACGACCATGTGCTCGACGACATGGTGCGTCAGCTTCCGGGCGCCGACACCTGCG TGGACGTACAGGTTGAGCAGGCCCCCTTCGAACCGGAAGCGGGTGCTTATCAGCAAGGCGGTGGCCATTCCCATGGTCAT GCGCACAGCCATTCCCACGAAAAGCCACACTCGCACACTCACAACCACTGA
Upstream 100 bases:
>100_bases AGTACGTGCCGATGGCCAGCTGCTAACGTGCGAACCGGCGGAAGTGTTGCCAATGGCGCAGCGCTATTTTTTGTTTTAAC GCATTGTTTACGAGACAAGC
Downstream 100 bases:
>100_bases TTTCTCACGGTGCCAAAGGGCACAGGTACGTTAAAGGAGCACAGCATGAACAACACAAAACACAAGCTTACCGCTGCTGT TATTACCTGTGGGCTTGCCA
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH AHSHSHEKPHSHTHNH
Sequences:
>Translated_176_residues MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH AHSHSHEKPHSHTHNH >Mature_176_residues MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH AHSHSHEKPHSHTHNH
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_ALCBS (Q0VKY2)
Other databases:
- EMBL: AM286690 - RefSeq: YP_694438.1 - ProteinModelPortal: Q0VKY2 - SMR: Q0VKY2 - STRING: Q0VKY2 - GeneID: 4211735 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2718 - NMPDR: fig|393595.12.peg.2727 - eggNOG: COG2371 - HOGENOM: HBG635302 - OMA: DARCKSR - ProtClustDB: CLSK2504397 - BioCyc: ABOR393595:ABO_2718-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 19224; Mature: 19224
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGG CCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCEEEECC DVLTNADGVLVKVLAANETVSTIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVL CEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHHH DDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGHAHSHSHEKPHSHTHNH HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGG CCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCEEEECC DVLTNADGVLVKVLAANETVSTIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVL CEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHHH DDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGHAHSHSHEKPHSHTHNH HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA