Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is ureE

Identifier: 110835579

GI number: 110835579

Start: 3075296

End: 3075826

Strand: Reverse

Name: ureE

Synonym: ABO_2718

Alternate gene names: 110835579

Gene position: 3075826-3075296 (Counterclockwise)

Preceding gene: 110835580

Following gene: 110835578

Centisome position: 98.58

GC content: 56.69

Gene sequence:

>531_bases
ATGATCGAACTGACGAAAAAAATTACCGATACCGTCGCGCTGGAAAAAATCGATCCGGCGAGACTAAAAACCCTCAGCCT
ACCGCTCGATGCACGGATCAAAAGCCGGCAAAAAGTGCAGCTGACATCCGGCGAAGGCGTGGGCCTATTCCTAGAGCGAG
GCACCCTGCTTCGCGGTGGGGATGTGCTTACCAATGCAGACGGAGTGTTGGTCAAGGTGTTGGCCGCCAACGAAACCGTT
TCCACCATTGTTTGCAGTGATGCACTGATGCTAACCAAGGTGGCCTATCACCTGGGCAACCGTCACGTTCCGCTGCAGAT
CGAAACCGGCTTTGTTCGTTACCAGCACGACCATGTGCTCGACGACATGGTGCGTCAGCTTCCGGGCGCCGACACCTGCG
TGGACGTACAGGTTGAGCAGGCCCCCTTCGAACCGGAAGCGGGTGCTTATCAGCAAGGCGGTGGCCATTCCCATGGTCAT
GCGCACAGCCATTCCCACGAAAAGCCACACTCGCACACTCACAACCACTGA

Upstream 100 bases:

>100_bases
AGTACGTGCCGATGGCCAGCTGCTAACGTGCGAACCGGCGGAAGTGTTGCCAATGGCGCAGCGCTATTTTTTGTTTTAAC
GCATTGTTTACGAGACAAGC

Downstream 100 bases:

>100_bases
TTTCTCACGGTGCCAAAGGGCACAGGTACGTTAAAGGAGCACAGCATGAACAACACAAAACACAAGCTTACCGCTGCTGT
TATTACCTGTGGGCTTGCCA

Product: urease accessory protein UreE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV
STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH
AHSHSHEKPHSHTHNH

Sequences:

>Translated_176_residues
MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV
STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH
AHSHSHEKPHSHTHNH
>Mature_176_residues
MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGGDVLTNADGVLVKVLAANETV
STIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVLDDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGH
AHSHSHEKPHSHTHNH

Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly

COG id: COG2371

COG function: function code O; Urease accessory protein UreE

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREE_ALCBS (Q0VKY2)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694438.1
- ProteinModelPortal:   Q0VKY2
- SMR:   Q0VKY2
- STRING:   Q0VKY2
- GeneID:   4211735
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2718
- NMPDR:   fig|393595.12.peg.2727
- eggNOG:   COG2371
- HOGENOM:   HBG635302
- OMA:   DARCKSR
- ProtClustDB:   CLSK2504397
- BioCyc:   ABOR393595:ABO_2718-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00822
- InterPro:   IPR012406
- InterPro:   IPR007864
- InterPro:   IPR004029
- Gene3D:   G3DSA:3.30.70.790
- PIRSF:   PIRSF036402

Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N

EC number: NA

Molecular weight: Translated: 19224; Mature: 19224

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGG
CCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCEEEECC
DVLTNADGVLVKVLAANETVSTIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVL
CEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHHH
DDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGHAHSHSHEKPHSHTHNH
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIELTKKITDTVALEKIDPARLKTLSLPLDARIKSRQKVQLTSGEGVGLFLERGTLLRGG
CCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCEEEECC
DVLTNADGVLVKVLAANETVSTIVCSDALMLTKVAYHLGNRHVPLQIETGFVRYQHDHVL
CEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHHH
DDMVRQLPGADTCVDVQVEQAPFEPEAGAYQQGGGHSHGHAHSHSHEKPHSHTHNH
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA