| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is mnhF [H]
Identifier: 110835515
GI number: 110835515
Start: 2999392
End: 2999661
Strand: Reverse
Name: mnhF [H]
Synonym: ABO_2654
Alternate gene names: 110835515
Gene position: 2999661-2999392 (Counterclockwise)
Preceding gene: 110835516
Following gene: 110835514
Centisome position: 96.14
GC content: 50.74
Gene sequence:
>270_bases ATGTTAGAGACGGCGATTTCTATTGCCCTGGCGCTGATTACCTTGGCCTGGGTGCTGAACTTGTACCGCCTGATAATCGG GCCCTCACTGCCAGATCGAGTGTTGGCGTTGGATACCATGTACATCAACAGTATTGCGCTGATCGTAGTGTACGGTATCC AGGTGGACAGCAAGCTTTACTTTGAAGCGGCTATGCTGATCGCGCTGATCGGCTTTGTTAGTACCATTGCGGTGGCTAAA TACGTTACCCGCGGGGATATTATTGAGTGA
Upstream 100 bases:
>100_bases GGAAAACATTGTTGGTGCATGCGCTGGATGTGGATGACGTGGCGGCACTGGTGGCGGAGATCAAGCAGCGCTATGAGCAG CCGCTGAAGGAGATTTTCGA
Downstream 100 bases:
>100_bases GCGCCAGGTGCCGGGCGCCTTACGCCGAACGCAGTGTGTTTGCCCCGTGTATTGAGCATTCGGGGCCAGGAAAGCGGAGC GATTTATGGATTTTTTAATT
Product: multisubunit Na+/H+ antiporter, MnhF subunit
Products: NA
Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MLETAISIALALITLAWVLNLYRLIIGPSLPDRVLALDTMYINSIALIVVYGIQVDSKLYFEAAMLIALIGFVSTIAVAK YVTRGDIIE
Sequences:
>Translated_89_residues MLETAISIALALITLAWVLNLYRLIIGPSLPDRVLALDTMYINSIALIVVYGIQVDSKLYFEAAMLIALIGFVSTIAVAK YVTRGDIIE >Mature_89_residues MLETAISIALALITLAWVLNLYRLIIGPSLPDRVLALDTMYINSIALIVVYGIQVDSKLYFEAAMLIALIGFVSTIAVAK YVTRGDIIE
Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]
COG id: COG2212
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007208 [H]
Pfam domain/function: PF04066 MrpF_PhaF [H]
EC number: NA
Molecular weight: Translated: 9744; Mature: 9744
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETAISIALALITLAWVLNLYRLIIGPSLPDRVLALDTMYINSIALIVVYGIQVDSKLY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FEAAMLIALIGFVSTIAVAKYVTRGDIIE HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLETAISIALALITLAWVLNLYRLIIGPSLPDRVLALDTMYINSIALIVVYGIQVDSKLY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FEAAMLIALIGFVSTIAVAKYVTRGDIIE HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9680201; 11481430 [H]