| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ahcy [H]
Identifier: 110835479
GI number: 110835479
Start: 2962561
End: 2963949
Strand: Direct
Name: ahcy [H]
Synonym: ABO_2618
Alternate gene names: 110835479
Gene position: 2962561-2963949 (Clockwise)
Preceding gene: 110835478
Following gene: 110835480
Centisome position: 94.95
GC content: 53.71
Gene sequence:
>1389_bases ATGAACGCGAAAGTAGGCACCTTTACTGATTATAAAGTCGCGGATATTTCCCTAGCGAATTATGGCCGCTCAGAAATCCA TATTGCCGAAACCGAAATGCCGGCACTCATCGCTATTCGTGAAAAATACCGTGCCGAGCAGCCGCTGAAAGGCGCCAAAA TTATTGGCTGCATTCACATGACCATTCAGACCGCCGTACTGATCGAAACCCTGATTGCCCTGGGCGCAGAAGTACGCTGG TCCAGCTGTAATATCTTCTCCACCCAGGACCACGCCGCTGCCGCTATCGCTGCTGCCGGTGTTCCCGTGTTTGCCTGGAA AGGCGAAACCGAAGAAGAGTACATGTGGTGCATCGAGCAGACCTGTCGCGACGGCAACGGTGAACTGTGGGAAGCTAACA TGATTCTCGATGATGGCGGCGACCTGACCGGCTACATCCACGAAACCTACCCGGCCATGCTCGACAACATTCACGGCATT ACCGAAGAAACCACCACCGGTGTACACCGTCTCTACGAGATGCTGAACAAAGGCACATTGAAAGTGCCCGCAGTGAACGT GAATGATTCTGTCACCAAGAGCAAAAACGACAACAAATATGGTTGCCGTCATTCCCTGAACGATGCCATCAAGCGCGGTA CCGACCACCTGTTGTCTGGCAAGAAAGCCCTGGTTATCGGTTACGGTGACGTGGGCAAGGGCTCCGCCCAGTCCCTGCGT CAGGAAGGCATGATTGTGAAAGTCACCGAAGCCGATCCAATCTGCGCTATGCAGGCCTGCATGGACGGCTTTGAAGTGGT CAGCCAATACAAAGGTGGCATTAACGATGGCAGCGAAGCCTCCATCAACACCGATCTGCTAGGCAACACGGATCTGCTGG TTACCACCACCGGCAATTTCAATGTGTGCGACGCCAACATGCTCAAGGCGATCAAGAAAGGCGCCGTGGTCTGTAACATC GGTCACTTCGACAACGAAGTGGATACCGCCTTCATGCGCGAAACCTGGGAATGGGAAGAAGTAAAACCCCAAGTCCACAA AGTATGGCGCAATAAAGCTGAAGGCGATTTCCTGCTGCTGCTTTCCGAAGGCCGCCTGGTCAACCTGGGCAACGCCACCG GGCACCCCAGCCGCATCATGGATGGCTCCTTCGCCAACCAGGTACTGGCGCAGATGTATCTGTTCGACCAGGGCTACGCC AACCACTCTGATGCCGTGAAAGAAAAAATGCTCAAGGTAGAAGTGCTGCCCAAAAAGCTGGATGAAGAAGTGGCCCGCTA CATGGTGGAAGGCTTTGGTGGTGTGATCACCAAGCTCAGCAAAGAGCAAGCCGACTACATCGGCGTAGACGTGAACGGCC CCTACAAGCCCGAACATTATAAGTACTAA
Upstream 100 bases:
>100_bases CCGCAGGCAGGCATACCTAACACCTTGGGGCTCGCCACACAGCGAGCCGACTAGCACCACGTAATGCGTTTAGCATGTTA CGTGCAAGCGGAGAAACAGA
Downstream 100 bases:
>100_bases ACACTGGTACGCCCCACGCATCATGCAACACGCGTGGGGCGTGAGGTGTGCAGCATGAAGCGAGTTCCCAATGAAACGAA TCAGTTTTGAATTCTTTCCG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNAKVGTFTDYKVADISLANYGRSEIHIAETEMPALIAIREKYRAEQPLKGAKIIGCIHMTIQTAVLIETLIALGAEVRW SSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYMWCIEQTCRDGNGELWEANMILDDGGDLTGYIHETYPAMLDNIHGI TEETTTGVHRLYEMLNKGTLKVPAVNVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKKALVIGYGDVGKGSAQSLR QEGMIVKVTEADPICAMQACMDGFEVVSQYKGGINDGSEASINTDLLGNTDLLVTTTGNFNVCDANMLKAIKKGAVVCNI GHFDNEVDTAFMRETWEWEEVKPQVHKVWRNKAEGDFLLLLSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFDQGYA NHSDAVKEKMLKVEVLPKKLDEEVARYMVEGFGGVITKLSKEQADYIGVDVNGPYKPEHYKY
Sequences:
>Translated_462_residues MNAKVGTFTDYKVADISLANYGRSEIHIAETEMPALIAIREKYRAEQPLKGAKIIGCIHMTIQTAVLIETLIALGAEVRW SSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYMWCIEQTCRDGNGELWEANMILDDGGDLTGYIHETYPAMLDNIHGI TEETTTGVHRLYEMLNKGTLKVPAVNVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKKALVIGYGDVGKGSAQSLR QEGMIVKVTEADPICAMQACMDGFEVVSQYKGGINDGSEASINTDLLGNTDLLVTTTGNFNVCDANMLKAIKKGAVVCNI GHFDNEVDTAFMRETWEWEEVKPQVHKVWRNKAEGDFLLLLSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFDQGYA NHSDAVKEKMLKVEVLPKKLDEEVARYMVEGFGGVITKLSKEQADYIGVDVNGPYKPEHYKY >Mature_462_residues MNAKVGTFTDYKVADISLANYGRSEIHIAETEMPALIAIREKYRAEQPLKGAKIIGCIHMTIQTAVLIETLIALGAEVRW SSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYMWCIEQTCRDGNGELWEANMILDDGGDLTGYIHETYPAMLDNIHGI TEETTTGVHRLYEMLNKGTLKVPAVNVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKKALVIGYGDVGKGSAQSLR QEGMIVKVTEADPICAMQACMDGFEVVSQYKGGINDGSEASINTDLLGNTDLLVTTTGNFNVCDANMLKAIKKGAVVCNI GHFDNEVDTAFMRETWEWEEVKPQVHKVWRNKAEGDFLLLLSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFDQGYA NHSDAVKEKMLKVEVLPKKLDEEVARYMVEGFGGVITKLSKEQADYIGVDVNGPYKPEHYKY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=453, Percent_Identity=56.0706401766004, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI239937451, Length=431, Percent_Identity=54.7563805104408, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI298286489, Length=456, Percent_Identity=47.1491228070175, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI24308043, Length=456, Percent_Identity=47.1491228070175, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI195539337, Length=456, Percent_Identity=47.1491228070175, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI195539349, Length=456, Percent_Identity=47.1491228070175, Blast_Score=421, Evalue=1e-118, Organism=Homo sapiens, GI21361647, Length=456, Percent_Identity=46.4912280701754, Blast_Score=400, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17506425, Length=453, Percent_Identity=56.953642384106, Blast_Score=484, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6320882, Length=466, Percent_Identity=54.7210300429184, Blast_Score=466, Evalue=1e-132, Organism=Drosophila melanogaster, GI24642172, Length=453, Percent_Identity=56.5121412803532, Blast_Score=465, Evalue=1e-131, Organism=Drosophila melanogaster, GI24656245, Length=457, Percent_Identity=47.0459518599562, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI45553387, Length=457, Percent_Identity=45.7330415754923, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI45553385, Length=456, Percent_Identity=45.6140350877193, Blast_Score=384, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50892; Mature: 50892
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKVGTFTDYKVADISLANYGRSEIHIAETEMPALIAIREKYRAEQPLKGAKIIGCIHM CCCCCCCCCCCEEEEEEHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEHHH TIQTAVLIETLIALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYMWCIEQ HHHHHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH TCRDGNGELWEANMILDDGGDLTGYIHETYPAMLDNIHGITEETTTGVHRLYEMLNKGTL HHCCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE KVPAVNVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKKALVIGYGDVGKGSAQSLR EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCHHHHHH QEGMIVKVTEADPICAMQACMDGFEVVSQYKGGINDGSEASINTDLLGNTDLLVTTTGNF HCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCC NVCDANMLKAIKKGAVVCNIGHFDNEVDTAFMRETWEWEEVKPQVHKVWRNKAEGDFLLL CCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHCHHHHHHHHCCCCCCEEEE LSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFDQGYANHSDAVKEKMLKVEVLPKKL EECCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH DEEVARYMVEGFGGVITKLSKEQADYIGVDVNGPYKPEHYKY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MNAKVGTFTDYKVADISLANYGRSEIHIAETEMPALIAIREKYRAEQPLKGAKIIGCIHM CCCCCCCCCCCEEEEEEHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEHHH TIQTAVLIETLIALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYMWCIEQ HHHHHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH TCRDGNGELWEANMILDDGGDLTGYIHETYPAMLDNIHGITEETTTGVHRLYEMLNKGTL HHCCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE KVPAVNVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKKALVIGYGDVGKGSAQSLR EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCHHHHHH QEGMIVKVTEADPICAMQACMDGFEVVSQYKGGINDGSEASINTDLLGNTDLLVTTTGNF HCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCC NVCDANMLKAIKKGAVVCNIGHFDNEVDTAFMRETWEWEEVKPQVHKVWRNKAEGDFLLL CCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHCHHHHHHHHCCCCCCEEEE LSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFDQGYANHSDAVKEKMLKVEVLPKKL EECCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH DEEVARYMVEGFGGVITKLSKEQADYIGVDVNGPYKPEHYKY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA