| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835477
Identifier: 110835477
GI number: 110835477
Start: 2960237
End: 2961211
Strand: Direct
Name: 110835477
Synonym: ABO_2616
Alternate gene names: NA
Gene position: 2960237-2961211 (Clockwise)
Preceding gene: 110835472
Following gene: 110835478
Centisome position: 94.88
GC content: 60.92
Gene sequence:
>975_bases ATGACTGCACTGGCCCCCTCTCCACCGGATGTTACCGACCGCCTGGCAGCCTTTCTCAAGGCCGCTGGTGACCCGCTGCG CCTGCAGGTGCTGCAAGTATTGGGACAGAACAGCTTCGGCGTGCTGGAGCTCTGCGAGATCATGGCCATGAAGCAGTCCG GTATGAGCCACCATCTAAAGGTGCTCACCAACGGCGGGCTGGTGGAAAAACGCCGCGAAGGCAATTCCATTTTTTACCGT CGTCGCCTGCCTCAGCCAGATAATACGGAAGGCGCTCTTCACGGCGCCCTGCTTGAAGAGCTGGACAATGGAGCACTGGA TTTCCAAGTGGCTGGGCGACTGGAACAGGTGCAAAGCCAACGAGCGGAACAGAGCCGGGCTTTTTTTGCCCGCCACGGGG AAGCCGGGGACGATAAGCAGGAGCTGATTGCCGACTACTCGCAATACGCCGAACAAGCCTTGGAACTATTGGTGCGTGCG TGCCCCCAAGGCGGCTCGGCTCTGGAGATCGGCCCTGGAGACGGGCGCTTTCTGCAGGAGTTGTCACAACGATTTGATAC GGTAACCGGGCTGGACAACGCCGAAGCCATGCTGGCCCGAGCCCGCCAGCAACTGCAGGCGGCAGCACTGAACAATGTGC AACTGATCTGCGGCGAATGGCCTGCCAGCGCGGCAACCTTACCTGCGGCAAACGCGGTGGTACTAAACATGGTGCTGCAC CATCTGCCCGCCCCGGCCAGCGCGATCCGCGCCGCCGCGGCACAATTGCAGGCCGGCGGCACTCTGCTGATCACCGACCT GTGTCGGCATGATCAGCACTGGGCCCACGAGGCTTGCGGTGATTTTTGGCTCGGCTTTGATGAAGCCGATCTAGTGGATT GGGCCGGCCGCGCCGGTCTTGAGTTGCAGGAAAGCCAGTTTCTGGCCCTGCGCAATGGTTTTCAGGTGCAGGTACGCACC TTCAGGAAGAGTTGA
Upstream 100 bases:
>100_bases TACCGCGTATGGGCCTGTTGCACGCAACGGGTTAAGCTGACAGACAGACCTATATCAATTTATTTTGATTTAGTTTTCAG TTGCGCTAAACTGCGCCACC
Downstream 100 bases:
>100_bases GCTTTACACTTTCAACTCATTTTTTTCGCGCCTATTGAAGGCAACGCAACGATCAATGAATCACGGGAGCACTCCAGTAA TGAGTGAATATTCCATCTTT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Methyltransferase Type; ArsR Family Regulatory Protein; SAM-Dependent Methyltransferase; ArsR-Family Transcriptional Regulator; Transcriptional Regulator; Methyltransferase Domain Family; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTALAPSPPDVTDRLAAFLKAAGDPLRLQVLQVLGQNSFGVLELCEIMAMKQSGMSHHLKVLTNGGLVEKRREGNSIFYR RRLPQPDNTEGALHGALLEELDNGALDFQVAGRLEQVQSQRAEQSRAFFARHGEAGDDKQELIADYSQYAEQALELLVRA CPQGGSALEIGPGDGRFLQELSQRFDTVTGLDNAEAMLARARQQLQAAALNNVQLICGEWPASAATLPAANAVVLNMVLH HLPAPASAIRAAAAQLQAGGTLLITDLCRHDQHWAHEACGDFWLGFDEADLVDWAGRAGLELQESQFLALRNGFQVQVRT FRKS
Sequences:
>Translated_324_residues MTALAPSPPDVTDRLAAFLKAAGDPLRLQVLQVLGQNSFGVLELCEIMAMKQSGMSHHLKVLTNGGLVEKRREGNSIFYR RRLPQPDNTEGALHGALLEELDNGALDFQVAGRLEQVQSQRAEQSRAFFARHGEAGDDKQELIADYSQYAEQALELLVRA CPQGGSALEIGPGDGRFLQELSQRFDTVTGLDNAEAMLARARQQLQAAALNNVQLICGEWPASAATLPAANAVVLNMVLH HLPAPASAIRAAAAQLQAGGTLLITDLCRHDQHWAHEACGDFWLGFDEADLVDWAGRAGLELQESQFLALRNGFQVQVRT FRKS >Mature_323_residues TALAPSPPDVTDRLAAFLKAAGDPLRLQVLQVLGQNSFGVLELCEIMAMKQSGMSHHLKVLTNGGLVEKRREGNSIFYRR RLPQPDNTEGALHGALLEELDNGALDFQVAGRLEQVQSQRAEQSRAFFARHGEAGDDKQELIADYSQYAEQALELLVRAC PQGGSALEIGPGDGRFLQELSQRFDTVTGLDNAEAMLARARQQLQAAALNNVQLICGEWPASAATLPAANAVVLNMVLHH LPAPASAIRAAAAQLQAGGTLLITDLCRHDQHWAHEACGDFWLGFDEADLVDWAGRAGLELQESQFLALRNGFQVQVRTF RKS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35252; Mature: 35121
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALAPSPPDVTDRLAAFLKAAGDPLRLQVLQVLGQNSFGVLELCEIMAMKQSGMSHHLK CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH VLTNGGLVEKRREGNSIFYRRRLPQPDNTEGALHGALLEELDNGALDFQVAGRLEQVQSQ EEECCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH RAEQSRAFFARHGEAGDDKQELIADYSQYAEQALELLVRACPQGGSALEIGPGDGRFLQE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH LSQRFDTVTGLDNAEAMLARARQQLQAAALNNVQLICGEWPASAATLPAANAVVLNMVLH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHH HLPAPASAIRAAAAQLQAGGTLLITDLCRHDQHWAHEACGDFWLGFDEADLVDWAGRAGL HCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC ELQESQFLALRNGFQVQVRTFRKS EEHHHHHHHHHCCCEEEEEEECCC >Mature Secondary Structure TALAPSPPDVTDRLAAFLKAAGDPLRLQVLQVLGQNSFGVLELCEIMAMKQSGMSHHLK CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH VLTNGGLVEKRREGNSIFYRRRLPQPDNTEGALHGALLEELDNGALDFQVAGRLEQVQSQ EEECCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH RAEQSRAFFARHGEAGDDKQELIADYSQYAEQALELLVRACPQGGSALEIGPGDGRFLQE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH LSQRFDTVTGLDNAEAMLARARQQLQAAALNNVQLICGEWPASAATLPAANAVVLNMVLH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHH HLPAPASAIRAAAAQLQAGGTLLITDLCRHDQHWAHEACGDFWLGFDEADLVDWAGRAGL HCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC ELQESQFLALRNGFQVQVRTFRKS EEHHHHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA