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The map label for this gene is bkdR [H]

Identifier: 110835299

GI number: 110835299

Start: 2760484

End: 2760978

Strand: Direct

Name: bkdR [H]

Synonym: ABO_2438

Alternate gene names: 110835299

Gene position: 2760484-2760978 (Clockwise)

Preceding gene: 110835297

Following gene: 110835300

Centisome position: 88.47

GC content: 54.75

Gene sequence:

>495_bases
ATGAACAAGCAGGCGCTAGCAAAACTGGATCGCACCGACCTGCGTATTCTCGATGCACTGCAGCATAATGGTGGTCTCAG
TAACCAGCAGCTGGCGGAAACCGTAGGGCTCTCGCCCTCACCTTGCTCCCGGCGGGTACAAAAGCTGGAAGCCGCCGGCA
TCATTGTCAAACGGGAAACCGTACTGGACGCCCGAAAATTGGGGCTCGACCTGACAGTAATGATCCAAATCAGCATGGAT
CGCCACACCCCGGAGCGCTTCGCCAACTTCGAGGAAAAGGTGGCCAGTTTTGTAGAGGTGCAGCAGTGCTACCTGGTCAC
CGGTCAAGACGCGGATTACTTGCTCAAAGTGGTGGTGCCAGATATTGATGCTTACCAGAGTTTTTTGCTTAACCGTATTA
CCCGGATCGAAGGGGTGAGCGGCGTGCACTCCAGCTTTGTAATGCGCCGGGTAGTCGATACCGCAGCCTTGCCGTTGAAT
TATGTGAATGCGTGA

Upstream 100 bases:

>100_bases
TTTACGGTAGCCGACCCGCAATTTGGTTGCTTTTTTAATCCAATTACCGCCATATACGCAATAATATTGCTCAAAAAGCC
AAGATAGTGAGAAATTTATT

Downstream 100 bases:

>100_bases
AAAACCGTTGAACGTACAAAACTAAAGCGCGGAGAGGTGTGGCGAAAAAAGCCCGCGATATACCATCGTGCGTGGAGGGT
TCTTCAGAACTCATCGGCCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNKQALAKLDRTDLRILDALQHNGGLSNQQLAETVGLSPSPCSRRVQKLEAAGIIVKRETVLDARKLGLDLTVMIQISMD
RHTPERFANFEEKVASFVEVQQCYLVTGQDADYLLKVVVPDIDAYQSFLLNRITRIEGVSGVHSSFVMRRVVDTAALPLN
YVNA

Sequences:

>Translated_164_residues
MNKQALAKLDRTDLRILDALQHNGGLSNQQLAETVGLSPSPCSRRVQKLEAAGIIVKRETVLDARKLGLDLTVMIQISMD
RHTPERFANFEEKVASFVEVQQCYLVTGQDADYLLKVVVPDIDAYQSFLLNRITRIEGVSGVHSSFVMRRVVDTAALPLN
YVNA
>Mature_164_residues
MNKQALAKLDRTDLRILDALQHNGGLSNQQLAETVGLSPSPCSRRVQKLEAAGIIVKRETVLDARKLGLDLTVMIQISMD
RHTPERFANFEEKVASFVEVQQCYLVTGQDADYLLKVVVPDIDAYQSFLLNRITRIEGVSGVHSSFVMRRVVDTAALPLN
YVNA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=40.2684563758389, Blast_Score=113, Evalue=6e-27,
Organism=Escherichia coli, GI87081742, Length=152, Percent_Identity=35.5263157894737, Blast_Score=101, Evalue=2e-23,
Organism=Escherichia coli, GI1790182, Length=143, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18269; Mature: 18269

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQALAKLDRTDLRILDALQHNGGLSNQQLAETVGLSPSPCSRRVQKLEAAGIIVKRET
CCHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEHHH
VLDARKLGLDLTVMIQISMDRHTPERFANFEEKVASFVEVQQCYLVTGQDADYLLKVVVP
HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHEEHHHCC
DIDAYQSFLLNRITRIEGVSGVHSSFVMRRVVDTAALPLNYVNA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNKQALAKLDRTDLRILDALQHNGGLSNQQLAETVGLSPSPCSRRVQKLEAAGIIVKRET
CCHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEHHH
VLDARKLGLDLTVMIQISMDRHTPERFANFEEKVASFVEVQQCYLVTGQDADYLLKVVVP
HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHEEHHHCC
DIDAYQSFLLNRITRIEGVSGVHSSFVMRRVVDTAALPLNYVNA
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]