| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is waaG [H]
Identifier: 110835158
GI number: 110835158
Start: 2619307
End: 2620401
Strand: Reverse
Name: waaG [H]
Synonym: ABO_2297
Alternate gene names: 110835158
Gene position: 2620401-2619307 (Counterclockwise)
Preceding gene: 110835159
Following gene: 110835157
Centisome position: 83.98
GC content: 56.89
Gene sequence:
>1095_bases ATGAAGCTGGCGTTTGTGCTGTTCGAGTATTTCCCGTTCGGCGGGTTGCAACGGGATATGTTGGCTATTGCCCAAGCCTC TGTGGCACGGGGTCATCAGGTCACCATTTTTACCCGAGACTGGGACGGTGAAAAACCAACGGATATTACTGTGCATTTGT TGCCGGTGACGGCCGGCAGCAATCACCGGCGTGACGTGCAGTTTGCAGGCCAGGTGAGTGAGTTGTGGGCGGATTTTGAC CTGAGAGTAGGGTTTAACAAAATGCCTGGGCTGGATTGGTATTATGCTGCGGATGGCTGTCTTTCCGAGCGTTACTCTTG GCCGCGTTCCTGGTTACCGCGTTATCGCAGCAAACTGGATATGGAGCATGCGGTTTTTGCACAGGATAGCACTACTCGTA TTTTGTCCATTTCTCCGCCCCAGAAATCCCTGTTTCAGGATCACTACGGTACCGCCGAACAACGATTTGTCGATTTGCCA CCAGGCATTCGCCGTGACCGGGTGCTGCCTGAGTGTTATGAGTCGGTGCGTATGGCGCATCGGGAAAAATTGGATCTGGC TGATCAGGAATCGATGCTGTTGTTTGTGGGTTCCGGTTTTCGTACCAAGGGCCTGGATCGTGCCATTCATGTGCTGGCGG CGCTGCCAGGGGCGCAACTGTTTGTAGTGGGCGATGACCGCCCTGAGCGTTTTGCCGCGCTGGCGCGCCGGCTGGGTGTA ATGTCGCGCCTGCATTTCATGGGTGGGCAGGACAATGTGCCGGAGTGGCTCTGGTCTGCGGATTTGCTGCTGCATCTCGC CTATGCGGAAAACACCGGGACGGTATTACTTGAGGCTGCCATTGCCGGGTTGCCGGTTTTGACCACGCAGGCATGCGGCT ATTCACCGTACATCGAGCAGGCGGCCATGGGCCAGGTAATGAATGACAATGCGTCGCTTGCCATGATGGCCTTGGCAGCC AAGGGGCTTCTGATGCAGGGGCGTGATGACTGGCGGCAACGGGGACGGGCATTTGCGGCCAGTGCAGATATTTATGACCT GGTGGAGCATGCGGTGTCCGCAGTGGAAGCGGGCGACGGCGGGGAGCAGGAATGA
Upstream 100 bases:
>100_bases AATGCACCTATCGGGGAGAGTTAGGCAAGGGGGTAGAACCTCCTTGCTTTAGCAGTCTCAAGCCAAAACAGGTCTGGCAG CAACTGTTACGGGTGGCCTC
Downstream 100 bases:
>100_bases GCAAGATGCTGCGTGAGGATCTGGCGGCGGCCTGGGCCGGTAAGGACCCGTTTGAGCAGGCAGCCCGACAACAAGGGGAT ATTTTCCGGGAACGTGAAGG
Product: UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase
Products: NA
Alternate protein names: Glucosyltransferase I [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKLAFVLFEYFPFGGLQRDMLAIAQASVARGHQVTIFTRDWDGEKPTDITVHLLPVTAGSNHRRDVQFAGQVSELWADFD LRVGFNKMPGLDWYYAADGCLSERYSWPRSWLPRYRSKLDMEHAVFAQDSTTRILSISPPQKSLFQDHYGTAEQRFVDLP PGIRRDRVLPECYESVRMAHREKLDLADQESMLLFVGSGFRTKGLDRAIHVLAALPGAQLFVVGDDRPERFAALARRLGV MSRLHFMGGQDNVPEWLWSADLLLHLAYAENTGTVLLEAAIAGLPVLTTQACGYSPYIEQAAMGQVMNDNASLAMMALAA KGLLMQGRDDWRQRGRAFAASADIYDLVEHAVSAVEAGDGGEQE
Sequences:
>Translated_364_residues MKLAFVLFEYFPFGGLQRDMLAIAQASVARGHQVTIFTRDWDGEKPTDITVHLLPVTAGSNHRRDVQFAGQVSELWADFD LRVGFNKMPGLDWYYAADGCLSERYSWPRSWLPRYRSKLDMEHAVFAQDSTTRILSISPPQKSLFQDHYGTAEQRFVDLP PGIRRDRVLPECYESVRMAHREKLDLADQESMLLFVGSGFRTKGLDRAIHVLAALPGAQLFVVGDDRPERFAALARRLGV MSRLHFMGGQDNVPEWLWSADLLLHLAYAENTGTVLLEAAIAGLPVLTTQACGYSPYIEQAAMGQVMNDNASLAMMALAA KGLLMQGRDDWRQRGRAFAASADIYDLVEHAVSAVEAGDGGEQE >Mature_364_residues MKLAFVLFEYFPFGGLQRDMLAIAQASVARGHQVTIFTRDWDGEKPTDITVHLLPVTAGSNHRRDVQFAGQVSELWADFD LRVGFNKMPGLDWYYAADGCLSERYSWPRSWLPRYRSKLDMEHAVFAQDSTTRILSISPPQKSLFQDHYGTAEQRFVDLP PGIRRDRVLPECYESVRMAHREKLDLADQESMLLFVGSGFRTKGLDRAIHVLAALPGAQLFVVGDDRPERFAALARRLGV MSRLHFMGGQDNVPEWLWSADLLLHLAYAENTGTVLLEAAIAGLPVLTTQACGYSPYIEQAAMGQVMNDNASLAMMALAA KGLLMQGRDDWRQRGRAFAASADIYDLVEHAVSAVEAGDGGEQE
Specific function: Involved in the addition of the first glucose residue to the lipopolysaccharide core [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=374, Percent_Identity=41.9786096256684, Blast_Score=286, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.-
Molecular weight: Translated: 40613; Mature: 40613
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAFVLFEYFPFGGLQRDMLAIAQASVARGHQVTIFTRDWDGEKPTDITVHLLPVTAGS CCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCC NHRRDVQFAGQVSELWADFDLRVGFNKMPGLDWYYAADGCLSERYSWPRSWLPRYRSKLD CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHCC MEHAVFAQDSTTRILSISPPQKSLFQDHYGTAEQRFVDLPPGIRRDRVLPECYESVRMAH CHHHEEECCCCCEEEEECCCHHHHHHHHCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHH REKLDLADQESMLLFVGSGFRTKGLDRAIHVLAALPGAQLFVVGDDRPERFAALARRLGV HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH MSRLHFMGGQDNVPEWLWSADLLLHLAYAENTGTVLLEAAIAGLPVLTTQACGYSPYIEQ HHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEHHHCCCCEEEHHCCCCCHHHHH AAMGQVMNDNASLAMMALAAKGLLMQGRDDWRQRGRAFAASADIYDLVEHAVSAVEAGDG HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCC GEQE CCCC >Mature Secondary Structure MKLAFVLFEYFPFGGLQRDMLAIAQASVARGHQVTIFTRDWDGEKPTDITVHLLPVTAGS CCCEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCC NHRRDVQFAGQVSELWADFDLRVGFNKMPGLDWYYAADGCLSERYSWPRSWLPRYRSKLD CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHCC MEHAVFAQDSTTRILSISPPQKSLFQDHYGTAEQRFVDLPPGIRRDRVLPECYESVRMAH CHHHEEECCCCCEEEEECCCHHHHHHHHCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHH REKLDLADQESMLLFVGSGFRTKGLDRAIHVLAALPGAQLFVVGDDRPERFAALARRLGV HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH MSRLHFMGGQDNVPEWLWSADLLLHLAYAENTGTVLLEAAIAGLPVLTTQACGYSPYIEQ HHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEHHHCCCCEEEHHCCCCCHHHHH AAMGQVMNDNASLAMMALAAKGLLMQGRDDWRQRGRAFAASADIYDLVEHAVSAVEAGDG HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCC GEQE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732225; 8041620; 9278503; 1447141; 7988890 [H]