| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is hisH [H]
Identifier: 110835141
GI number: 110835141
Start: 2599559
End: 2600200
Strand: Reverse
Name: hisH [H]
Synonym: ABO_2280
Alternate gene names: 110835141
Gene position: 2600200-2599559 (Counterclockwise)
Preceding gene: 110835142
Following gene: 110835140
Centisome position: 83.34
GC content: 57.32
Gene sequence:
>642_bases ATGAGCGAAGTCGTTGCCGTTATTGATTACGGAATGGGTAACCTGCACTCCGCAGGTAAGGCGCTGGAGAAAGTCGCCGA TGGCCAGAAAATCATTATTACCGGCGATCCGGCGCAGGTGCGTGCAGCGGACCGGGTGGTTTTTCCTGGTGTGGGTGCTA TTCGTGACTGCATCGCGGTTCTGAAAGACACCGGCCTGGATCAGGCCATCCGTGATGTGGCGGCGGCGGGCAAACCGCTG TTGGGCATCTGTGTCGGGATGCAGGCAATGATGGCCCGTAGTGAAGAAAATCACGGGGTGGATTGCCTGGGCATCTTCGA CGGCCAGGTGACTTTTTTCGGTGAGCAGTTCAGCGATACCGGTGTTCGCTTGAAAGTGCCGCACATGGGCTGGAACCAGG TACAGCAGTGCATGGCCCATCCTATGTGGGCCGGTATCGACAACCATACCCGGTTTTATTTTGTGCACAGTTACTGCGTT ACCGGCCTGCCCGATGACGCTGTGGCAGGGCGCTGTGATTATGGTTTGAGTTTTGCGGCAGCCGCGGTTCAAGGCAACGT GTTTGCGGTGCAGTTCCACCCGGAAAAAAGCGCGGATGCAGGCCTCGCCCTGTTGGAAAACTTCCTGCGCTGGCAGCCAT AA
Upstream 100 bases:
>100_bases CTCGTATGGATGGTATTACGCCCTCCACGAAGGGCACCCTGAGCGAAAGTGGCGATAGCCAGTAAGCAGCCCAGTAGCAA TTACAAGGACAGCCCCGAGT
Downstream 100 bases:
>100_bases AAGACAGCAGGCTTGCACGCTAGGGTTTCTCTCTACGGTGTTCGTATAACGGGCGCGGCGGGGGAGGGATGCCGATTTCC ATGAATTTAAATGAAGAGAT
Product: glutamine amidotransferase subunit hisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit 1; IGP synthase subunit hisH 1; ImGP synthase subunit hisH 1; IGPS subunit hisH 1 [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSEVVAVIDYGMGNLHSAGKALEKVADGQKIIITGDPAQVRAADRVVFPGVGAIRDCIAVLKDTGLDQAIRDVAAAGKPL LGICVGMQAMMARSEENHGVDCLGIFDGQVTFFGEQFSDTGVRLKVPHMGWNQVQQCMAHPMWAGIDNHTRFYFVHSYCV TGLPDDAVAGRCDYGLSFAAAAVQGNVFAVQFHPEKSADAGLALLENFLRWQP
Sequences:
>Translated_213_residues MSEVVAVIDYGMGNLHSAGKALEKVADGQKIIITGDPAQVRAADRVVFPGVGAIRDCIAVLKDTGLDQAIRDVAAAGKPL LGICVGMQAMMARSEENHGVDCLGIFDGQVTFFGEQFSDTGVRLKVPHMGWNQVQQCMAHPMWAGIDNHTRFYFVHSYCV TGLPDDAVAGRCDYGLSFAAAAVQGNVFAVQFHPEKSADAGLALLENFLRWQP >Mature_212_residues SEVVAVIDYGMGNLHSAGKALEKVADGQKIIITGDPAQVRAADRVVFPGVGAIRDCIAVLKDTGLDQAIRDVAAAGKPLL GICVGMQAMMARSEENHGVDCLGIFDGQVTFFGEQFSDTGVRLKVPHMGWNQVQQCMAHPMWAGIDNHTRFYFVHSYCVT GLPDDAVAGRCDYGLSFAAAAVQGNVFAVQFHPEKSADAGLALLENFLRWQP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=206, Percent_Identity=39.3203883495146, Blast_Score=139, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319725, Length=219, Percent_Identity=34.703196347032, Blast_Score=125, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22868; Mature: 22737
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVAVIDYGMGNLHSAGKALEKVADGQKIIITGDPAQVRAADRVVFPGVGAIRDCIAV CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCEEECCCCHHHHHHHHH LKDTGLDQAIRDVAAAGKPLLGICVGMQAMMARSEENHGVDCLGIFDGQVTFFGEQFSDT HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCC GVRLKVPHMGWNQVQQCMAHPMWAGIDNHTRFYFVHSYCVTGLPDDAVAGRCDYGLSFAA CCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCHHHHH AAVQGNVFAVQFHPEKSADAGLALLENFLRWQP HHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SEVVAVIDYGMGNLHSAGKALEKVADGQKIIITGDPAQVRAADRVVFPGVGAIRDCIAV CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCEEECCCCHHHHHHHHH LKDTGLDQAIRDVAAAGKPLLGICVGMQAMMARSEENHGVDCLGIFDGQVTFFGEQFSDT HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCC GVRLKVPHMGWNQVQQCMAHPMWAGIDNHTRFYFVHSYCVTGLPDDAVAGRCDYGLSFAA CCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCHHHHH AAVQGNVFAVQFHPEKSADAGLALLENFLRWQP HHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]