Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835122

Identifier: 110835122

GI number: 110835122

Start: 2580670

End: 2581446

Strand: Reverse

Name: 110835122

Synonym: ABO_2261

Alternate gene names: NA

Gene position: 2581446-2580670 (Counterclockwise)

Preceding gene: 110835123

Following gene: 110835121

Centisome position: 82.73

GC content: 56.89

Gene sequence:

>777_bases
ATGGAGATAATAATGAAAAAGTCGTTAATTTCGTTTGTTGTGCTGGCCTTGGTGTCTGGGGTGAGCTTGGCCTCCATGGC
GGAAAACGCAGGGAGTGTCAGCGAGGGGAAGGAGCCTGATGCGCCTGCGTCGAAGATTTATCGAACCACCGACGAAAAAG
GTAATGTGGTGTTCTCCGACCAGCCGGCGCAGAACCGCCACTCAGAAGAAGTGAAGCTGAAAACCACTAATACGGTGCCG
ATTAAGACGGTGGAAATGCCGCAAGCCGTTGCTCAGCCTGAAGAGGCTAAAACAGGAGGCCAGGCCGGGGAGGGTTATAG
CTCGCTGGCCATTACCGCGCCGGAAAGTGGTTCTACTCTGCGTAACCCTGCAGATGCGGTATATGTGTCTGTGAGTTTAC
AGCCCGGTCTAAAGACGGGAGATAGATTAGTGCTGATCGACAACGGTATCGAGCAGCCGGCCATGCAGCTCGATGCTCCG
GATCGCGGTGAGCACACCCTTATCGTTAAGGTGGTCGGGGAAGATGGAGAGCCCCGGATTACTTCCGAGCCGGTGAAGCT
TTACATACACCGCAGCACGGTCGGCGATTTCCGTAACTCTGCAGGTGGCGGCAGTAACGGTGGTGCTGCGCAAGCGGGTG
GTGCAGCCGATCGTGGCGGCGCGGCGAATGTGGGGGGTAGTGCCTCAACTGGGGGCGCTGCCAATGTGGGCAGTGGAGCA
GATCGGAGCAGTGCTGCTCGGCCCGCTAAACCGAATCGGAGCATTCTCAGTAACTAA

Upstream 100 bases:

>100_bases
CCGCTTGTCGGGGGCTTTTTTTTGCCTGGAATAAAGGCGGCGGTTTTGTGCACTCCCCCCTTTTCTGAGCGGTCGAGTCA
GGCCAGAATCAAGGGCAGAT

Downstream 100 bases:

>100_bases
ATATGCACCCATATGGTGCAATGCGGCCTGTCATCCCTTTAAACTCATCAACGACAAGCGCTTGCGCTTGCGCCATAGGC
TGCTGGCTGACGTTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MEIIMKKSLISFVVLALVSGVSLASMAENAGSVSEGKEPDAPASKIYRTTDEKGNVVFSDQPAQNRHSEEVKLKTTNTVP
IKTVEMPQAVAQPEEAKTGGQAGEGYSSLAITAPESGSTLRNPADAVYVSVSLQPGLKTGDRLVLIDNGIEQPAMQLDAP
DRGEHTLIVKVVGEDGEPRITSEPVKLYIHRSTVGDFRNSAGGGSNGGAAQAGGAADRGGAANVGGSASTGGAANVGSGA
DRSSAARPAKPNRSILSN

Sequences:

>Translated_258_residues
MEIIMKKSLISFVVLALVSGVSLASMAENAGSVSEGKEPDAPASKIYRTTDEKGNVVFSDQPAQNRHSEEVKLKTTNTVP
IKTVEMPQAVAQPEEAKTGGQAGEGYSSLAITAPESGSTLRNPADAVYVSVSLQPGLKTGDRLVLIDNGIEQPAMQLDAP
DRGEHTLIVKVVGEDGEPRITSEPVKLYIHRSTVGDFRNSAGGGSNGGAAQAGGAADRGGAANVGGSASTGGAANVGSGA
DRSSAARPAKPNRSILSN
>Mature_258_residues
MEIIMKKSLISFVVLALVSGVSLASMAENAGSVSEGKEPDAPASKIYRTTDEKGNVVFSDQPAQNRHSEEVKLKTTNTVP
IKTVEMPQAVAQPEEAKTGGQAGEGYSSLAITAPESGSTLRNPADAVYVSVSLQPGLKTGDRLVLIDNGIEQPAMQLDAP
DRGEHTLIVKVVGEDGEPRITSEPVKLYIHRSTVGDFRNSAGGGSNGGAAQAGGAADRGGAANVGGSASTGGAANVGSGA
DRSSAARPAKPNRSILSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26322; Mature: 26322

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIMKKSLISFVVLALVSGVSLASMAENAGSVSEGKEPDAPASKIYRTTDEKGNVVFSD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHEECCCCCCCEEECC
QPAQNRHSEEVKLKTTNTVPIKTVEMPQAVAQPEEAKTGGQAGEGYSSLAITAPESGSTL
CCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCC
RNPADAVYVSVSLQPGLKTGDRLVLIDNGIEQPAMQLDAPDRGEHTLIVKVVGEDGEPRI
CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCC
TSEPVKLYIHRSTVGDFRNSAGGGSNGGAAQAGGAADRGGAANVGGSASTGGAANVGSGA
CCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRSSAARPAKPNRSILSN
CCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MEIIMKKSLISFVVLALVSGVSLASMAENAGSVSEGKEPDAPASKIYRTTDEKGNVVFSD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHEECCCCCCCEEECC
QPAQNRHSEEVKLKTTNTVPIKTVEMPQAVAQPEEAKTGGQAGEGYSSLAITAPESGSTL
CCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCHHHCCCCCCCCCCCEEEEECCCCCCCC
RNPADAVYVSVSLQPGLKTGDRLVLIDNGIEQPAMQLDAPDRGEHTLIVKVVGEDGEPRI
CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCC
TSEPVKLYIHRSTVGDFRNSAGGGSNGGAAQAGGAADRGGAANVGGSASTGGAANVGSGA
CCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRSSAARPAKPNRSILSN
CCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA