| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is maeB [H]
Identifier: 110835100
GI number: 110835100
Start: 2558154
End: 2559428
Strand: Reverse
Name: maeB [H]
Synonym: ABO_2239
Alternate gene names: 110835100
Gene position: 2559428-2558154 (Counterclockwise)
Preceding gene: 110835101
Following gene: 110835098
Centisome position: 82.03
GC content: 54.98
Gene sequence:
>1275_bases ATGTCCGAGGATTTAAAAACGGCGGCCCTGGAATACCACGCCAAACCGCGGCCGGGGAAAATTAGCGTCGAGGTAACCAA GCCGGCGGCGACCAGTCGAGATCTGAGCCTGGCCTATAGCCCAGGTGTAGCTGAACCGGTGCGAGAAATCGCGCGGGAGC CGGAGCTGGCCTACCGTTTTACTTCCAAGGGCAACCTGGTAGCCGTAATTAGTGATGGCACGGCGATTCTTGGTCTTGGC AATCTGGGCGCGCTAGCCTCCAAGCCGGTGATGGAAGGTAAGGGCATTCTGTTCAAGTTGTTTGCGGGTATCGATGTGTT CGATATCGAAGTGGACTCTGAGGATTCCCAGGCTTTTATTGATACGGTAATGCGTATTCATCGCACCTTCGGTGGCATCA ATCTGGAAGATATCCGTGCGCCGGAGTGTTTCGAGATTGAGCGTATTCTCAAAGAACAGTGCGAAGTTCCCGTATTCCAT GATGACCAGCACGGCACCGCTATTGTGGTGGGGGCAGGTTTGATTAATGCGCTGGAAATTCAAAACAAGCGTATCGAAGA CATCAAGGTAGTGTGTGTCGGGGCTGGTGCGGCGGGTATCGCATCTGTGCGGTTGTTGATCGAGATGGGCGCGCGCAAGG AAAATATTCTGGTGTTGGATCGTAAGGGGGTGATTCATAGCCGCCGTGATGATCTGAACCAGTACAAGGCTGCGCTGGCC AACGATACGGATAAGCGCACATTGAACGATGCTGTGGAAGACGCGGATGTGTTCATCGGCGTTTCCGGGCCGGATATGTT GACCCCAGAAATGGTCAAGAAGATGGCTCCCAAGCCGATCATCTTCGCGTTGGCTAACCCGGATCCGGAAATTCGTCCGG AAGTGGCCAAGGCGGCACGTCCGGATGCGATTGTGGCGACGGGTCGTTCGGATTTCCCGAACCAAGTAAACAATGTGCTG TGTTTCCCGTACATGTTTCGTGGGGCTTTGGATGTGCGCTCCACGTCCATCACTGAAGAAATGAAGATCGCCGCAGTGCA TGCTATTGCCGGGCTGGTGCGAACGGCGCCCCCGCAGGAAGTGCTGGATGCCTACGGTGGTGAGCCGTTGACCTTCGGGC CGGAATATATCATTCCCAAGCCGAATGATCCGCGTTTGTTGGGCAAGGTTTCTGCTGCTGTGGCCCAGGCAGCGGTGGAT TGTGGTGTGGCCCGTAAGGGATACCCATCACACTACCCGCTAAACTCGCTGGACGAGATTTTCCCAGAACTTTAA
Upstream 100 bases:
>100_bases CGTTACAGCGCCTATTGTAAAAAGCACCCAACTGGGTGCTTTTTACGTTAAGTACTTGCGTACACAGTGTATATCCCAAA AAAGGGAAGCGGAGACCAGC
Downstream 100 bases:
>100_bases GGGAGCAGTGCCAGCCATAAAAAAACCGCCTTTCGGCGGTTTTTTTATGGCTGCTCATTTCTGTTTCAGCACAGCACAGC ACAGCAGAGCAGAGTTGTAC
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSEDLKTAALEYHAKPRPGKISVEVTKPAATSRDLSLAYSPGVAEPVREIAREPELAYRFTSKGNLVAVISDGTAILGLG NLGALASKPVMEGKGILFKLFAGIDVFDIEVDSEDSQAFIDTVMRIHRTFGGINLEDIRAPECFEIERILKEQCEVPVFH DDQHGTAIVVGAGLINALEIQNKRIEDIKVVCVGAGAAGIASVRLLIEMGARKENILVLDRKGVIHSRRDDLNQYKAALA NDTDKRTLNDAVEDADVFIGVSGPDMLTPEMVKKMAPKPIIFALANPDPEIRPEVAKAARPDAIVATGRSDFPNQVNNVL CFPYMFRGALDVRSTSITEEMKIAAVHAIAGLVRTAPPQEVLDAYGGEPLTFGPEYIIPKPNDPRLLGKVSAAVAQAAVD CGVARKGYPSHYPLNSLDEIFPEL
Sequences:
>Translated_424_residues MSEDLKTAALEYHAKPRPGKISVEVTKPAATSRDLSLAYSPGVAEPVREIAREPELAYRFTSKGNLVAVISDGTAILGLG NLGALASKPVMEGKGILFKLFAGIDVFDIEVDSEDSQAFIDTVMRIHRTFGGINLEDIRAPECFEIERILKEQCEVPVFH DDQHGTAIVVGAGLINALEIQNKRIEDIKVVCVGAGAAGIASVRLLIEMGARKENILVLDRKGVIHSRRDDLNQYKAALA NDTDKRTLNDAVEDADVFIGVSGPDMLTPEMVKKMAPKPIIFALANPDPEIRPEVAKAARPDAIVATGRSDFPNQVNNVL CFPYMFRGALDVRSTSITEEMKIAAVHAIAGLVRTAPPQEVLDAYGGEPLTFGPEYIIPKPNDPRLLGKVSAAVAQAAVD CGVARKGYPSHYPLNSLDEIFPEL >Mature_423_residues SEDLKTAALEYHAKPRPGKISVEVTKPAATSRDLSLAYSPGVAEPVREIAREPELAYRFTSKGNLVAVISDGTAILGLGN LGALASKPVMEGKGILFKLFAGIDVFDIEVDSEDSQAFIDTVMRIHRTFGGINLEDIRAPECFEIERILKEQCEVPVFHD DQHGTAIVVGAGLINALEIQNKRIEDIKVVCVGAGAAGIASVRLLIEMGARKENILVLDRKGVIHSRRDDLNQYKAALAN DTDKRTLNDAVEDADVFIGVSGPDMLTPEMVKKMAPKPIIFALANPDPEIRPEVAKAARPDAIVATGRSDFPNQVNNVLC FPYMFRGALDVRSTSITEEMKIAAVHAIAGLVRTAPPQEVLDAYGGEPLTFGPEYIIPKPNDPRLLGKVSAAVAQAAVDC GVARKGYPSHYPLNSLDEIFPEL
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=346, Percent_Identity=26.5895953757225, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI62420882, Length=343, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI62420880, Length=343, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI239049447, Length=343, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4505145, Length=346, Percent_Identity=26.878612716763, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788806, Length=408, Percent_Identity=61.0294117647059, Blast_Score=499, Evalue=1e-142, Organism=Escherichia coli, GI87081919, Length=291, Percent_Identity=26.4604810996564, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17537199, Length=343, Percent_Identity=28.8629737609329, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=33.0543933054393, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI78707242, Length=341, Percent_Identity=26.9794721407625, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI78707238, Length=341, Percent_Identity=26.9794721407625, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI78707240, Length=341, Percent_Identity=26.9794721407625, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24646388, Length=346, Percent_Identity=28.9017341040462, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646386, Length=346, Percent_Identity=28.9017341040462, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281362674, Length=349, Percent_Identity=27.2206303724928, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356279, Length=349, Percent_Identity=27.2206303724928, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281362672, Length=349, Percent_Identity=27.2206303724928, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 45799; Mature: 45668
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDLKTAALEYHAKPRPGKISVEVTKPAATSRDLSLAYSPGVAEPVREIAREPELAYRF CCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEE TSKGNLVAVISDGTAILGLGNLGALASKPVMEGKGILFKLFAGIDVFDIEVDSEDSQAFI ECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCEEEHCCCCEEEEEEECCCCHHHHH DTVMRIHRTFGGINLEDIRAPECFEIERILKEQCEVPVFHDDQHGTAIVVGAGLINALEI HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEEEECCHHHHHHH QNKRIEDIKVVCVGAGAAGIASVRLLIEMGARKENILVLDRKGVIHSRRDDLNQYKAALA CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC NDTDKRTLNDAVEDADVFIGVSGPDMLTPEMVKKMAPKPIIFALANPDPEIRPEVAKAAR CCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCC PDAIVATGRSDFPNQVNNVLCFPYMFRGALDVRSTSITEEMKIAAVHAIAGLVRTAPPQE CCEEEECCCCCCCHHHHCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH VLDAYGGEPLTFGPEYIIPKPNDPRLLGKVSAAVAQAAVDCGVARKGYPSHYPLNSLDEI HHHHHCCCCEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FPEL HCCC >Mature Secondary Structure SEDLKTAALEYHAKPRPGKISVEVTKPAATSRDLSLAYSPGVAEPVREIAREPELAYRF CCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEE TSKGNLVAVISDGTAILGLGNLGALASKPVMEGKGILFKLFAGIDVFDIEVDSEDSQAFI ECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCEEEHCCCCEEEEEEECCCCHHHHH DTVMRIHRTFGGINLEDIRAPECFEIERILKEQCEVPVFHDDQHGTAIVVGAGLINALEI HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEEEECCHHHHHHH QNKRIEDIKVVCVGAGAAGIASVRLLIEMGARKENILVLDRKGVIHSRRDDLNQYKAALA CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC NDTDKRTLNDAVEDADVFIGVSGPDMLTPEMVKKMAPKPIIFALANPDPEIRPEVAKAAR CCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCC PDAIVATGRSDFPNQVNNVLCFPYMFRGALDVRSTSITEEMKIAAVHAIAGLVRTAPPQE CCEEEECCCCCCCHHHHCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH VLDAYGGEPLTFGPEYIIPKPNDPRLLGKVSAAVAQAAVDCGVARKGYPSHYPLNSLDEI HHHHHCCCCEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FPEL HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]