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The map label for this gene is nrdR

Identifier: 110835036

GI number: 110835036

Start: 2484144

End: 2484638

Strand: Reverse

Name: nrdR

Synonym: ABO_2175

Alternate gene names: 110835036

Gene position: 2484638-2484144 (Counterclockwise)

Preceding gene: 110835037

Following gene: 110835035

Centisome position: 79.63

GC content: 56.77

Gene sequence:

>495_bases
ATGTACTGCCCGTTTTGCTCTGCTCAGGACACCAAGGTGATCGATTCCCGTCTGGTGGCGGATGGGGTGCAGATTCGTCG
GCGTCGCGAGTGCTTAAGTTGTACGGAGCGCTTCACCACCTTTGAGACAGCGGAATTAGTGATGCCGCGGTTGGTGAAAA
CTGACGGGACCCGTCAGCCGTTCGATGAGGCCAAGCTGCGGGCGGGTATGTTACGGGCGCTGGAAAAGCGGCCGGTGAGT
ATGGAAGATCTGGAAGCAGCGATCAGTCGTATTTGCCATCGTCTACGGGCCACTGGAGAACGGGAGTTGCCCGCTCGGGA
GCTGGGTGAGTTTGTGATGGAAGAGCTGCAGCAGCTGGATGATGTGGCTTATGTGCGCTTCGCCTCGGTGTATCGCAGTT
TTCAGGATATTTCCGAGTTTTCCGCTGAAGTGGATCGCCTGAAAAAGGCGGGCGGCAAACCCGGTGACAAGCTGGGTGAG
CCAAAAGAATCATGA

Upstream 100 bases:

>100_bases
GCGGCTTTCTTGTCTCTGAAATCTCGGTGTTGTGACGCTATCATTGGTAAGGTTTGTGTTTGAAGCTTGTTGCTTTCCGC
TAGGCCGTTAGGAGACGTCC

Downstream 100 bases:

>100_bases
GTTTTTCGGCTGCCGACCACCAGTACATGGCTCGAGCGTTGCAGTTGGCACGTCGTGGGCTGTATACCACGGACCCTAAT
CCGCGGGTAGGGTGCGTGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MYCPFCSAQDTKVIDSRLVADGVQIRRRRECLSCTERFTTFETAELVMPRLVKTDGTRQPFDEAKLRAGMLRALEKRPVS
MEDLEAAISRICHRLRATGERELPARELGEFVMEELQQLDDVAYVRFASVYRSFQDISEFSAEVDRLKKAGGKPGDKLGE
PKES

Sequences:

>Translated_164_residues
MYCPFCSAQDTKVIDSRLVADGVQIRRRRECLSCTERFTTFETAELVMPRLVKTDGTRQPFDEAKLRAGMLRALEKRPVS
MEDLEAAISRICHRLRATGERELPARELGEFVMEELQQLDDVAYVRFASVYRSFQDISEFSAEVDRLKKAGGKPGDKLGE
PKES
>Mature_164_residues
MYCPFCSAQDTKVIDSRLVADGVQIRRRRECLSCTERFTTFETAELVMPRLVKTDGTRQPFDEAKLRAGMLRALEKRPVS
MEDLEAAISRICHRLRATGERELPARELGEFVMEELQQLDDVAYVRFASVYRSFQDISEFSAEVDRLKKAGGKPGDKLGE
PKES

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=148, Percent_Identity=66.8918918918919, Blast_Score=213, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_ALCBS (Q0VMH5)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_693895.1
- STRING:   Q0VMH5
- GeneID:   4212083
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2175
- NMPDR:   fig|393595.12.peg.2175
- eggNOG:   COG1327
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- PhylomeDB:   Q0VMH5
- BioCyc:   ABOR393595:ABO_2175-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 18696; Mature: 18696

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCPFCSAQDTKVIDSRLVADGVQIRRRRECLSCTERFTTFETAELVMPRLVKTDGTRQP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDEAKLRAGMLRALEKRPVSMEDLEAAISRICHRLRATGERELPARELGEFVMEELQQLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DVAYVRFASVYRSFQDISEFSAEVDRLKKAGGKPGDKLGEPKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYCPFCSAQDTKVIDSRLVADGVQIRRRRECLSCTERFTTFETAELVMPRLVKTDGTRQP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDEAKLRAGMLRALEKRPVSMEDLEAAISRICHRLRATGERELPARELGEFVMEELQQLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DVAYVRFASVYRSFQDISEFSAEVDRLKKAGGKPGDKLGEPKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA