Click here to switch to the map view.

The map label for this gene is 110835002

Identifier: 110835002

GI number: 110835002

Start: 2446512

End: 2446985

Strand: Reverse

Name: 110835002

Synonym: ABO_2141

Alternate gene names: NA

Gene position: 2446985-2446512 (Counterclockwise)

Preceding gene: 110835003

Following gene: 110834997

Centisome position: 78.43

GC content: 55.7

Gene sequence:

>474_bases
ATGCCACTGTCCAATCCCGAGCAAGACAAGCGTAAAGCGCTGTATGCGGTAGACCCCTTGGTGCCGCTTGATCAGCTGGA
TCCCGCCACCGACCTGATCGACCCTGACACCTTGTCCCTGTTGGTGCTGATGGTGTGTGAGGTCCCAGAGGAAAGTCTCG
CCCTGTTTCGAAAACGCTTGGTCCCTCCGAGCCAGTTACGCCAGCAGGTGGCTGCGCGAGAAGTGGAGTTGCAGCGTCAT
ATGCTGGATATCACACGAAAGCTGGAATCCATGGGCTATGAAGTGGACTCGCGGGTGGCGCGGGGTAGTAAGACCGGTCA
GGTGATTACCGAGGTCGCCGATCGTGAGGCGGTGAATCTGGTCATTCTTCAGCGACGACGACAAAAAAACTGGCAGCGGC
TATTGGTTGGTAGTGTTGCAGATTACGTTGCCCGACACATTCGCCAGCCTCTGTTGATCATGCCTTATTCATAA

Upstream 100 bases:

>100_bases
GCTTGGTTATTCTGAATCCCTGTATGAATTGTTGCCGGCCCTGGTGGTGTCTTTTGGGGTTTATGCCGTGATGCGGCCTT
TCTACCGGAAGGAGGAGTGA

Downstream 100 bases:

>100_bases
TGGGGCAATGATTGTGAGGATGAGCAGATGAGCGAATGGGGCTAAGGCTCCTCTCTCCTAACGTGTAGCGCATGACAAAC
TGTTTTTTTTTGAGCCTTAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPLSNPEQDKRKALYAVDPLVPLDQLDPATDLIDPDTLSLLVLMVCEVPEESLALFRKRLVPPSQLRQQVAAREVELQRH
MLDITRKLESMGYEVDSRVARGSKTGQVITEVADREAVNLVILQRRRQKNWQRLLVGSVADYVARHIRQPLLIMPYS

Sequences:

>Translated_157_residues
MPLSNPEQDKRKALYAVDPLVPLDQLDPATDLIDPDTLSLLVLMVCEVPEESLALFRKRLVPPSQLRQQVAAREVELQRH
MLDITRKLESMGYEVDSRVARGSKTGQVITEVADREAVNLVILQRRRQKNWQRLLVGSVADYVARHIRQPLLIMPYS
>Mature_156_residues
PLSNPEQDKRKALYAVDPLVPLDQLDPATDLIDPDTLSLLVLMVCEVPEESLALFRKRLVPPSQLRQQVAAREVELQRHM
LDITRKLESMGYEVDSRVARGSKTGQVITEVADREAVNLVILQRRRQKNWQRLLVGSVADYVARHIRQPLLIMPYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17949; Mature: 17818

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSNPEQDKRKALYAVDPLVPLDQLDPATDLIDPDTLSLLVLMVCEVPEESLALFRKRL
CCCCCCCHHHHHHHHHHCCCCCCHHCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPPSQLRQQVAAREVELQRHMLDITRKLESMGYEVDSRVARGSKTGQVITEVADREAVNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
VILQRRRQKNWQRLLVGSVADYVARHIRQPLLIMPYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure 
PLSNPEQDKRKALYAVDPLVPLDQLDPATDLIDPDTLSLLVLMVCEVPEESLALFRKRL
CCCCCCHHHHHHHHHHCCCCCCHHCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPPSQLRQQVAAREVELQRHMLDITRKLESMGYEVDSRVARGSKTGQVITEVADREAVNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
VILQRRRQKNWQRLLVGSVADYVARHIRQPLLIMPYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA