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The map label for this gene is 110834740

Identifier: 110834740

GI number: 110834740

Start: 2155011

End: 2155673

Strand: Reverse

Name: 110834740

Synonym: ABO_1879

Alternate gene names: NA

Gene position: 2155673-2155011 (Counterclockwise)

Preceding gene: 110834741

Following gene: 110834739

Centisome position: 69.09

GC content: 47.51

Gene sequence:

>663_bases
ATGACGATACGAATAAATGCAGACTTTTCACAACGCATCGTGATTCAACCGGATGACTATCACTGGGTGGAATCGCCGAT
GCCGGGTGTGCAACGAATGATGCTCGATAGGGTGGGGGGTGAAACTGCACGTGCCACCTCGCTTGTTCGCTATGAGCCTT
TTAGTGAGTTCTCGCCACATATTCATTCCGGTGGAGAAGAGTTTTTTGTGCTTGAAGGCGTGTTTTCTGATGAGTATCAA
CGCTATGGCAAAGGCAGTTATGTACGCAACCCTATTGGTACATCACACACACCTAAAATCGGTAAGGAGGGGGCGACTAT
TTTCGTTAAATTACAGCAGTTCGACGAAAAAGATACAGAGCAAAAGGTCATCGATACCCAAGCACAACCATGGCGTCAGG
GGCTAGTCGGTGGCCTAAAAGTGATGCCACTGCATGAGTTTGAAAGTGAACACGTAGCTCTGGTGAAGTGGGCGCCAAAC
ACTCAATTTACTGCTCATCAGCATTGGGGTGGAGAAGAAATTTTTGTATTAGGGGGTACCTTCCATGATGAGTATGGTAG
CTACGCTAAAGGCTCATGGCTACGTAGCCCTCATCAAAGTCGGCACAGCCCCTTCACCAAAGAAGATGGTGCATTGATTT
ACGTAAAGACAGGGCACTTGTAA

Upstream 100 bases:

>100_bases
TTCTCTTAACTCCTGGATCCAGCGGGCTCACTGGTGCTATTGGGGAGTGTAGATGGGGCGTAATGGCAGGTAGGGACTAA
ATTTTTGTTAGGCGCTTAAC

Downstream 100 bases:

>100_bases
ATATAAATGCCGCCAACTTTTCGACCCAGCGAGGCGGTGCGTATTTTTCTCGTGTAGAACCGTGACGCTTTACTAATCCC
TCGAGTAGCCAATAGAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Negative Regulator; Anti-Sigm Factor ChrR; Anti-Sigma Factor ChrR; Anti-Sigma Factor; Transcriptional Regulator; Anti-ECFsigma Factor Like; Transcription Negative Regulator ChrR; Transcriptional Activator Anti-ECFsigma Factor; Transcriptional Regulator Protein; Anti-ECF Sigma Factor ChrR

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTIRINADFSQRIVIQPDDYHWVESPMPGVQRMMLDRVGGETARATSLVRYEPFSEFSPHIHSGGEEFFVLEGVFSDEYQ
RYGKGSYVRNPIGTSHTPKIGKEGATIFVKLQQFDEKDTEQKVIDTQAQPWRQGLVGGLKVMPLHEFESEHVALVKWAPN
TQFTAHQHWGGEEIFVLGGTFHDEYGSYAKGSWLRSPHQSRHSPFTKEDGALIYVKTGHL

Sequences:

>Translated_220_residues
MTIRINADFSQRIVIQPDDYHWVESPMPGVQRMMLDRVGGETARATSLVRYEPFSEFSPHIHSGGEEFFVLEGVFSDEYQ
RYGKGSYVRNPIGTSHTPKIGKEGATIFVKLQQFDEKDTEQKVIDTQAQPWRQGLVGGLKVMPLHEFESEHVALVKWAPN
TQFTAHQHWGGEEIFVLGGTFHDEYGSYAKGSWLRSPHQSRHSPFTKEDGALIYVKTGHL
>Mature_219_residues
TIRINADFSQRIVIQPDDYHWVESPMPGVQRMMLDRVGGETARATSLVRYEPFSEFSPHIHSGGEEFFVLEGVFSDEYQR
YGKGSYVRNPIGTSHTPKIGKEGATIFVKLQQFDEKDTEQKVIDTQAQPWRQGLVGGLKVMPLHEFESEHVALVKWAPNT
QFTAHQHWGGEEIFVLGGTFHDEYGSYAKGSWLRSPHQSRHSPFTKEDGALIYVKTGHL

Specific function: Unknown

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25021; Mature: 24890

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRINADFSQRIVIQPDDYHWVESPMPGVQRMMLDRVGGETARATSLVRYEPFSEFSPH
CEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEECCHHHCCCC
IHSGGEEFFVLEGVFSDEYQRYGKGSYVRNPIGTSHTPKIGKEGATIFVKLQQFDEKDTE
CCCCCCEEEEEECCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
QKVIDTQAQPWRQGLVGGLKVMPLHEFESEHVALVKWAPNTQFTAHQHWGGEEIFVLGGT
HHHHCCCCCHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECCE
FHDEYGSYAKGSWLRSPHQSRHSPFTKEDGALIYVKTGHL
ECHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TIRINADFSQRIVIQPDDYHWVESPMPGVQRMMLDRVGGETARATSLVRYEPFSEFSPH
EEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEECCHHHCCCC
IHSGGEEFFVLEGVFSDEYQRYGKGSYVRNPIGTSHTPKIGKEGATIFVKLQQFDEKDTE
CCCCCCEEEEEECCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
QKVIDTQAQPWRQGLVGGLKVMPLHEFESEHVALVKWAPNTQFTAHQHWGGEEIFVLGGT
HHHHCCCCCHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECCE
FHDEYGSYAKGSWLRSPHQSRHSPFTKEDGALIYVKTGHL
ECHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA