Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834650

Identifier: 110834650

GI number: 110834650

Start: 2038399

End: 2039433

Strand: Direct

Name: 110834650

Synonym: ABO_1789

Alternate gene names: NA

Gene position: 2038399-2039433 (Clockwise)

Preceding gene: 110834649

Following gene: 110834651

Centisome position: 65.33

GC content: 51.98

Gene sequence:

>1035_bases
ATGAAATCACAACAACCGCCGGCCTTAGTTAATGATCAAGGCCAGGTCGCTTTCGGCGTATTCCCGCACACTGTTGCTAC
CATCAACGGTCGTGAAGCGGATTATCGCACCCCCATGGGCAAGCCGGCGTCGTCTTTTACTCGGCATTTTCATTACAAGC
AGTTCCAGTACTTCGGCATTATCAGCGATGAACTTCTAGCCGGTTGCGCATTTGCCCACACGGCCTACTTGGGCATGGCT
TTTTTCTATCTTTTTGAGCCGCAAACCGGCGTTCTCCACCAGTATACTTGGCGCTCACCATTAGGCAAAGGGTTGCACAT
GTCGCCTTCTCCACGACAAGGAGAAAGCGTATTTCAGCAAAAGAATGTGGTTATCCGCCTCGGTTACCAGCAGGATAGTG
TAGGTGCTCTCAGCAAAAGTCTATCAGTGAAGTTAGACGACCTAACCCTCCATGCCCAGATGGACGAAGGCACAGATTTT
CAACCCATGTCTTTGTGCACCCGCACCGGTATTAATGGTTGGGTGTATGCCAATAAAGTGGCAGGCAAAGCCGTCACCGG
ATCACTGCAGCGCCAAGGCAAGCATACTGACCTGACTGCCTTAGATGCCAGCGGGCACCATGATTTTTCCGCCGGCTATA
TGCGCCGTGAAACCTTTTGGAATTGGGCCTGCCTGTCCACCCGGGTGGGCGACACTCGCGTCGGACTGAACCTATCCTGC
GGTGTCAATGAGACAACCTTTTCCGAAAACTGCTTGTGGATTGATAATGTCATGGTCCCTACCGGCGGGGTGCTATTTGA
TTACAATCGTGATGATCTGATGCAACCTTGGGATATCCATAGCCTCTGCGGGCGTGTAAACCTGCAGTTCACTCCCAACG
GGAACCACAAAGAGCGCCTTAATTTGGGCCTCTTTGCCAGCAACTTTAATCAGCTGTTTGGCCACTTCGATGGCGAACTT
CGCCTGGATGACGGGCGCCGACTTTGCATCAAACGCCACTACGGTTTTGTCGAGGAGCAATACGCAAAATGGTAG

Upstream 100 bases:

>100_bases
TCATTGATTGACTATGTTGGATCAAACTCTCGCCCCTCATGGTCACAAACCCTCTCCATGACCAACCGGGCTTCATTATA
CCTGTCAGCTGGCCGACCCT

Downstream 100 bases:

>100_bases
ATCAAAAACGCGACACCGATGAAAGTACCGACCAACAAACTTCCACACCGGCAACCTTCAATGAAAAAATCCGCCGGGGT
TACTTCTGGATGGTGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKSQQPPALVNDQGQVAFGVFPHTVATINGREADYRTPMGKPASSFTRHFHYKQFQYFGIISDELLAGCAFAHTAYLGMA
FFYLFEPQTGVLHQYTWRSPLGKGLHMSPSPRQGESVFQQKNVVIRLGYQQDSVGALSKSLSVKLDDLTLHAQMDEGTDF
QPMSLCTRTGINGWVYANKVAGKAVTGSLQRQGKHTDLTALDASGHHDFSAGYMRRETFWNWACLSTRVGDTRVGLNLSC
GVNETTFSENCLWIDNVMVPTGGVLFDYNRDDLMQPWDIHSLCGRVNLQFTPNGNHKERLNLGLFASNFNQLFGHFDGEL
RLDDGRRLCIKRHYGFVEEQYAKW

Sequences:

>Translated_344_residues
MKSQQPPALVNDQGQVAFGVFPHTVATINGREADYRTPMGKPASSFTRHFHYKQFQYFGIISDELLAGCAFAHTAYLGMA
FFYLFEPQTGVLHQYTWRSPLGKGLHMSPSPRQGESVFQQKNVVIRLGYQQDSVGALSKSLSVKLDDLTLHAQMDEGTDF
QPMSLCTRTGINGWVYANKVAGKAVTGSLQRQGKHTDLTALDASGHHDFSAGYMRRETFWNWACLSTRVGDTRVGLNLSC
GVNETTFSENCLWIDNVMVPTGGVLFDYNRDDLMQPWDIHSLCGRVNLQFTPNGNHKERLNLGLFASNFNQLFGHFDGEL
RLDDGRRLCIKRHYGFVEEQYAKW
>Mature_344_residues
MKSQQPPALVNDQGQVAFGVFPHTVATINGREADYRTPMGKPASSFTRHFHYKQFQYFGIISDELLAGCAFAHTAYLGMA
FFYLFEPQTGVLHQYTWRSPLGKGLHMSPSPRQGESVFQQKNVVIRLGYQQDSVGALSKSLSVKLDDLTLHAQMDEGTDF
QPMSLCTRTGINGWVYANKVAGKAVTGSLQRQGKHTDLTALDASGHHDFSAGYMRRETFWNWACLSTRVGDTRVGLNLSC
GVNETTFSENCLWIDNVMVPTGGVLFDYNRDDLMQPWDIHSLCGRVNLQFTPNGNHKERLNLGLFASNFNQLFGHFDGEL
RLDDGRRLCIKRHYGFVEEQYAKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38767; Mature: 38767

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQQPPALVNDQGQVAFGVFPHTVATINGREADYRTPMGKPASSFTRHFHYKQFQYFGI
CCCCCCCCEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEE
ISDELLAGCAFAHTAYLGMAFFYLFEPQTGVLHQYTWRSPLGKGLHMSPSPRQGESVFQQ
EHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHC
KNVVIRLGYQQDSVGALSKSLSVKLDDLTLHAQMDEGTDFQPMSLCTRTGINGWVYANKV
CCEEEEECCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECC
AGKAVTGSLQRQGKHTDLTALDASGHHDFSAGYMRRETFWNWACLSTRVGDTRVGLNLSC
CCCHHCCHHHHCCCCCCEEEEECCCCCCCCCCCEEHHHCCCEEEEEECCCCEEECEEEEC
GVNETTFSENCLWIDNVMVPTGGVLFDYNRDDLMQPWDIHSLCGRVNLQFTPNGNHKERL
CCCCCCCCCCEEEEEEEEECCCCEEEECCHHHCCCCCCHHHHHCEEEEEECCCCCCHHEE
NLGLFASNFNQLFGHFDGELRLDDGRRLCIKRHYGFVEEQYAKW
EEEEEEHHHHHHHHCCCCEEEECCCCEEEEEHHCCCHHHHHCCC
>Mature Secondary Structure
MKSQQPPALVNDQGQVAFGVFPHTVATINGREADYRTPMGKPASSFTRHFHYKQFQYFGI
CCCCCCCCEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEE
ISDELLAGCAFAHTAYLGMAFFYLFEPQTGVLHQYTWRSPLGKGLHMSPSPRQGESVFQQ
EHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHC
KNVVIRLGYQQDSVGALSKSLSVKLDDLTLHAQMDEGTDFQPMSLCTRTGINGWVYANKV
CCEEEEECCCCCCHHHHHHCCEEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECC
AGKAVTGSLQRQGKHTDLTALDASGHHDFSAGYMRRETFWNWACLSTRVGDTRVGLNLSC
CCCHHCCHHHHCCCCCCEEEEECCCCCCCCCCCEEHHHCCCEEEEEECCCCEEECEEEEC
GVNETTFSENCLWIDNVMVPTGGVLFDYNRDDLMQPWDIHSLCGRVNLQFTPNGNHKERL
CCCCCCCCCCEEEEEEEEECCCCEEEECCHHHCCCCCCHHHHHCEEEEEECCCCCCHHEE
NLGLFASNFNQLFGHFDGELRLDDGRRLCIKRHYGFVEEQYAKW
EEEEEEHHHHHHHHCCCCEEEECCCCEEEEEHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA