| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834587
Identifier: 110834587
GI number: 110834587
Start: 1965558
End: 1965953
Strand: Direct
Name: 110834587
Synonym: ABO_1726
Alternate gene names: NA
Gene position: 1965558-1965953 (Clockwise)
Preceding gene: 110834586
Following gene: 110834588
Centisome position: 63.0
GC content: 53.03
Gene sequence:
>396_bases ATGACCCCATCCAAACGCGTTACCGGAATGCTTAGTGCCTTTGTTTTGCTATTTATGCAGGTGCTCATTGTACCCGCCTC GCAGGCCGCCATGATTGGTAATGACACTGTAATCCAGCAACAGGATCGCGCCGCCATGAAGCAGCAGGTCATGCGGTTAA TGGATCATAAAGTGGCCGCCCAGGCGTTGAGCGAATACGGCGTCAACCAAGAACAAGTGAGCCAGCGACTGGATCGCCTC ACCCATACTGAACTGCAACAGCTAGCCCAGAAATCCGAAGCGTTACCCGCCGGCCAAGGCGTATTCGGCGTCGTGCTTGC TATCATTCTAGTGCTGGTGATTTTGGATTTGCTCGGCGCTACCGATGTCTTCCCTGTAATCGACCCGGTTAATTAA
Upstream 100 bases:
>100_bases GTAAAGTTCTTGTAAAAAAAACTTCTAATGATGCCGCCATTCTTTTGAATAGCGGCCACACTGGTAAAGTATAGCCATCA ACCATTGAGGAGATTGCTTC
Downstream 100 bases:
>100_bases GCGACCGGCAAGCTGATGATAACTACAGCGCTGCCCAGATCTCTCGCCATTCTATTGACAGCCGCCCTGCTCGCTTTGGG TGGCTGTCAGAGTGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTPSKRVTGMLSAFVLLFMQVLIVPASQAAMIGNDTVIQQQDRAAMKQQVMRLMDHKVAAQALSEYGVNQEQVSQRLDRL THTELQQLAQKSEALPAGQGVFGVVLAIILVLVILDLLGATDVFPVIDPVN
Sequences:
>Translated_131_residues MTPSKRVTGMLSAFVLLFMQVLIVPASQAAMIGNDTVIQQQDRAAMKQQVMRLMDHKVAAQALSEYGVNQEQVSQRLDRL THTELQQLAQKSEALPAGQGVFGVVLAIILVLVILDLLGATDVFPVIDPVN >Mature_130_residues TPSKRVTGMLSAFVLLFMQVLIVPASQAAMIGNDTVIQQQDRAAMKQQVMRLMDHKVAAQALSEYGVNQEQVSQRLDRLT HTELQQLAQKSEALPAGQGVFGVVLAIILVLVILDLLGATDVFPVIDPVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14253; Mature: 14122
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSKRVTGMLSAFVLLFMQVLIVPASQAAMIGNDTVIQQQDRAAMKQQVMRLMDHKVAA CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QALSEYGVNQEQVSQRLDRLTHTELQQLAQKSEALPAGQGVFGVVLAIILVLVILDLLGA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC TDVFPVIDPVN CCCCCCCCCCC >Mature Secondary Structure TPSKRVTGMLSAFVLLFMQVLIVPASQAAMIGNDTVIQQQDRAAMKQQVMRLMDHKVAA CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QALSEYGVNQEQVSQRLDRLTHTELQQLAQKSEALPAGQGVFGVVLAIILVLVILDLLGA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC TDVFPVIDPVN CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA