Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834554

Identifier: 110834554

GI number: 110834554

Start: 1928265

End: 1928756

Strand: Direct

Name: 110834554

Synonym: ABO_1693

Alternate gene names: NA

Gene position: 1928265-1928756 (Clockwise)

Preceding gene: 110834553

Following gene: 110834555

Centisome position: 61.8

GC content: 58.13

Gene sequence:

>492_bases
ATGCGCTTGCGTTATCTCGCTCTGCTTCCCCTGCTAACCAGCCAGGCCATGGCTGATACCTTTTCTGTAGAGGTGGAAGT
GCCGCGTTTGAGTGTGGCCGAATATCATGCTCCCTATGTGGCCTTCTGGGTGGAAAATGCCGACCGTAGCACCCTAAAAC
CACTGGGCCTGTGGTACGACGACCAGGAAAAATGGCTCAAAGATATTCGCCAGTGGTGGCGCAGAACCGGCCGCAGCCAG
TCGGCGCCCTACGACGGTCTCACTGGCGCCACCCGCTCTCCTGGCACTCACACTGTGGACTTTAGTGATGTGGACGCACT
TAAATCCCTGCCCGCCGGCGAATACACCTTGGTGGTAGAAGCAGCCCGAGAAGTCGGTGGCCGCGAAGTGCTGAAATTAC
CGTTCCTGTGGCCGGCCGGGGAACGCCCTCAACAGCAGCAAGTAATAGGCACCGACGAACTGGGCACTGTCACCCTCACC
GTCTCTCAATAA

Upstream 100 bases:

>100_bases
CCACCTGGCCGGTCACTTTGGCGGGGTTAGTTCTCCCCTGGCTATTGATCATTTTTTTCATGCATTAAGACCCGACATTC
AGATAAGGAAGGACATTTTC

Downstream 100 bases:

>100_bases
CACCGACTACTCAAGGAGCGCCACCATGACCCGAGTCCGTTTCCCTAAAGTTGCACTGGCCGCATTGGTGCTGGCCACAG
CCCTACCCGCCCATGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRLRYLALLPLLTSQAMADTFSVEVEVPRLSVAEYHAPYVAFWVENADRSTLKPLGLWYDDQEKWLKDIRQWWRRTGRSQ
SAPYDGLTGATRSPGTHTVDFSDVDALKSLPAGEYTLVVEAAREVGGREVLKLPFLWPAGERPQQQQVIGTDELGTVTLT
VSQ

Sequences:

>Translated_163_residues
MRLRYLALLPLLTSQAMADTFSVEVEVPRLSVAEYHAPYVAFWVENADRSTLKPLGLWYDDQEKWLKDIRQWWRRTGRSQ
SAPYDGLTGATRSPGTHTVDFSDVDALKSLPAGEYTLVVEAAREVGGREVLKLPFLWPAGERPQQQQVIGTDELGTVTLT
VSQ
>Mature_163_residues
MRLRYLALLPLLTSQAMADTFSVEVEVPRLSVAEYHAPYVAFWVENADRSTLKPLGLWYDDQEKWLKDIRQWWRRTGRSQ
SAPYDGLTGATRSPGTHTVDFSDVDALKSLPAGEYTLVVEAAREVGGREVLKLPFLWPAGERPQQQQVIGTDELGTVTLT
VSQ

Specific function: Unknown

COG id: COG3656

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18349; Mature: 18349

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRYLALLPLLTSQAMADTFSVEVEVPRLSVAEYHAPYVAFWVENADRSTLKPLGLWYD
CCCHHHHHHHHHHHHHHHCEEEEEEECCCEEHHHHCCCEEEEEEECCCCCCCCCCCCCCC
DQEKWLKDIRQWWRRTGRSQSAPYDGLTGATRSPGTHTVDFSDVDALKSLPAGEYTLVVE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEE
AAREVGGREVLKLPFLWPAGERPQQQQVIGTDELGTVTLTVSQ
EHHHCCCCEEEEECEECCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRLRYLALLPLLTSQAMADTFSVEVEVPRLSVAEYHAPYVAFWVENADRSTLKPLGLWYD
CCCHHHHHHHHHHHHHHHCEEEEEEECCCEEHHHHCCCEEEEEEECCCCCCCCCCCCCCC
DQEKWLKDIRQWWRRTGRSQSAPYDGLTGATRSPGTHTVDFSDVDALKSLPAGEYTLVVE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEE
AAREVGGREVLKLPFLWPAGERPQQQQVIGTDELGTVTLTVSQ
EHHHCCCCEEEEECEECCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA