| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is caiE [C]
Identifier: 110834543
GI number: 110834543
Start: 1917672
End: 1918232
Strand: Direct
Name: caiE [C]
Synonym: ABO_1682
Alternate gene names: 110834543
Gene position: 1917672-1918232 (Clockwise)
Preceding gene: 110834542
Following gene: 110834544
Centisome position: 61.46
GC content: 51.52
Gene sequence:
>561_bases ATGATTCGTAAAAACCCTAATGGTGACTTGCCGGATATTCATCCGGACGCCTTCGTCGACCCTACCGCTATCATCTGTGG CAAAGTCATCGTAAGTCGCCATGTCTTTATCGGCCCCTACGCCGTCATTCGAGCGGACGAAACGGATGATCAAGGCAATC TTCACCCCATTCTCATTGGCGAAGGAACCAACATTCAGGATGGCGTCGTCATGCACTCCAAGGATGGAGGCCCCATCACG ATTGGTAAGCACAGCTCTATTGCCCATCGAGCCATCGTGCATGGCCCCTGTGAGGTGGGAGACAGCGTTTTTGTAGGCTT CAACAGCGTGCTTTTCAACTGCACTATCGGCGACGGCTGCGCCATTCGTCATAATGCGGTTATCGACGGCATGACGCTTC CCGCAAATTTTTATATCCCATCCACCAGCCGTATTGGACCCGACACGGATCTCAGCCTCATTCCCCGTGTGAGCCAAGAC ATCACCGCGTTTTCAGAAAGTGTATCCGATACCAATCAGCAACTCGTTCAGGGCTATAAAAGGATTCAAAATGAACTGTG A
Upstream 100 bases:
>100_bases ACCACATGACCCGCAAGTTCATTGAGCTTTACGGCCGCGAGCACTGGAAACAGACGAAAACCTGGTTTAACCAGGCACTG AAAGACGAAGGAAGAAACAA
Downstream 100 bases:
>100_bases AAACAGCTCTAGCCTATTAATCAAAGGTGCCACGGTCCTGTTGCCTGGTGGCCCTGAAGAAACCGATGTGGCCTGTCGTG ATGGCCGCATTGTGGCTATT
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIRKNPNGDLPDIHPDAFVDPTAIICGKVIVSRHVFIGPYAVIRADETDDQGNLHPILIGEGTNIQDGVVMHSKDGGPIT IGKHSSIAHRAIVHGPCEVGDSVFVGFNSVLFNCTIGDGCAIRHNAVIDGMTLPANFYIPSTSRIGPDTDLSLIPRVSQD ITAFSESVSDTNQQLVQGYKRIQNEL
Sequences:
>Translated_186_residues MIRKNPNGDLPDIHPDAFVDPTAIICGKVIVSRHVFIGPYAVIRADETDDQGNLHPILIGEGTNIQDGVVMHSKDGGPIT IGKHSSIAHRAIVHGPCEVGDSVFVGFNSVLFNCTIGDGCAIRHNAVIDGMTLPANFYIPSTSRIGPDTDLSLIPRVSQD ITAFSESVSDTNQQLVQGYKRIQNEL >Mature_186_residues MIRKNPNGDLPDIHPDAFVDPTAIICGKVIVSRHVFIGPYAVIRADETDDQGNLHPILIGEGTNIQDGVVMHSKDGGPIT IGKHSSIAHRAIVHGPCEVGDSVFVGFNSVLFNCTIGDGCAIRHNAVIDGMTLPANFYIPSTSRIGPDTDLSLIPRVSQD ITAFSESVSDTNQQLVQGYKRIQNEL
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI87081681, Length=170, Percent_Identity=32.3529411764706, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1787667, Length=135, Percent_Identity=32.5925925925926, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI87082240, Length=145, Percent_Identity=33.1034482758621, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19997; Mature: 19997
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNPNGDLPDIHPDAFVDPTAIICGKVIVSRHVFIGPYAVIRADETDDQGNLHPILIG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCEEEEEECCCCCCCCEEEEEEE EGTNIQDGVVMHSKDGGPITIGKHSSIAHRAIVHGPCEVGDSVFVGFNSVLFNCTIGDGC CCCCCCCCEEEECCCCCEEEECCCCCHHHHHEECCCHHCCCEEEEEECEEEEEEECCCCC AIRHNAVIDGMTLPANFYIPSTSRIGPDTDLSLIPRVSQDITAFSESVSDTNQQLVQGYK EEECCEEECCEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIQNEL HHHHCC >Mature Secondary Structure MIRKNPNGDLPDIHPDAFVDPTAIICGKVIVSRHVFIGPYAVIRADETDDQGNLHPILIG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCEEEEEECCCCCCCCEEEEEEE EGTNIQDGVVMHSKDGGPITIGKHSSIAHRAIVHGPCEVGDSVFVGFNSVLFNCTIGDGC CCCCCCCCEEEECCCCCEEEECCCCCHHHHHEECCCHHCCCEEEEEECEEEEEEECCCCC AIRHNAVIDGMTLPANFYIPSTSRIGPDTDLSLIPRVSQDITAFSESVSDTNQQLVQGYK EEECCEEECCEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIQNEL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]