Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110834416

Identifier: 110834416

GI number: 110834416

Start: 1777671

End: 1777961

Strand: Direct

Name: 110834416

Synonym: ABO_1555

Alternate gene names: NA

Gene position: 1777671-1777961 (Clockwise)

Preceding gene: 110834415

Following gene: 110834417

Centisome position: 56.97

GC content: 53.26

Gene sequence:

>291_bases
TTGTTGGCTTGTTTCTACATACTTATGACACCTTTCTCAATTACTTCACGCATTCTGGCTGCAGCTTTGGGTGGTTATGG
CCTTGCGTCCCTGGCAGCCATGGCGCTGGCCGTGATATTACCAATGGCCCGCGATCAGGCCGTGATTATTGGCATCATGC
TATCGCTCCTACTTTACTCTGCAGCAGCTATTTGGGCGTTTTGCGCACGTTCCAGCTGGCTGGCATGGGCCGGCATTCTC
CTTCCTGGCCTGCTCTTTGGCGCCTTGTATTTATGGGGCACTGCCGTATGA

Upstream 100 bases:

>100_bases
AAAGTTCGCTGTTCTTACAGTCTTTACACTCGAATGTCGCTGCGGCGCCACATTTACATTTCCTTTGCAGTTTGTTTGTA
GATAATAACAATTCTCATTA

Downstream 100 bases:

>100_bases
ATAAGTCATTCCGACAATCCATGGCCTGGCTACACACCTGGGCCGGCTTGTTACTTGGCTGGTTACTGGTGGCCATTTTT
ATTACTGGCACCAGCGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLACFYILMTPFSITSRILAAALGGYGLASLAAMALAVILPMARDQAVIIGIMLSLLLYSAAAIWAFCARSSWLAWAGIL
LPGLLFGALYLWGTAV

Sequences:

>Translated_96_residues
MLACFYILMTPFSITSRILAAALGGYGLASLAAMALAVILPMARDQAVIIGIMLSLLLYSAAAIWAFCARSSWLAWAGIL
LPGLLFGALYLWGTAV
>Mature_96_residues
MLACFYILMTPFSITSRILAAALGGYGLASLAAMALAVILPMARDQAVIIGIMLSLLLYSAAAIWAFCARSSWLAWAGIL
LPGLLFGALYLWGTAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10126; Mature: 10126

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACFYILMTPFSITSRILAAALGGYGLASLAAMALAVILPMARDQAVIIGIMLSLLLYS
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AAAIWAFCARSSWLAWAGILLPGLLFGALYLWGTAV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLACFYILMTPFSITSRILAAALGGYGLASLAAMALAVILPMARDQAVIIGIMLSLLLYS
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AAAIWAFCARSSWLAWAGILLPGLLFGALYLWGTAV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA