| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is msrA [H]
Identifier: 110834391
GI number: 110834391
Start: 1751583
End: 1752209
Strand: Direct
Name: msrA [H]
Synonym: ABO_1530
Alternate gene names: 110834391
Gene position: 1751583-1752209 (Clockwise)
Preceding gene: 110834390
Following gene: 110834392
Centisome position: 56.14
GC content: 52.79
Gene sequence:
>627_bases ATGAACGCAGTAATTCCCGGCACATCCCTGGCCATTCGCCCTGAAAACTTCCCTGACCCTATCGAAGATCTGCCCGTCAA TGGCACCGCCAAAGCGGTATTCGCTGGCGGCTGCTTCTGGTGTGTTGAAGCGGTCTATCTAAATCTGGAAGGAGTCAATG CGGTGGTATCTGGTTATGCAGGAGGCCATGCGGCTCAGGCCAATTACGAAGCCGTTTGCACCGGTACCACCGGCCATGCG GAAGTCATTGAAGTGGAATACAACAGCGCCGTCATAAGCTTTGGCGAGTTACTGAAAGTGTTTTTTTCTGTGGCCCACGA TCCTACCCACAAAGACCGCCAGGGCAACGATCGAGGCACCCAGTATCGCTCCGCGGTTTTTTATCATGATAACGCCGAGA AAACCGTAGCCACGGCCTATATCGAACAGCTAAACAATGCCGGCGCTTTTATTGCGCCCATCGCCACCACCGTGGAGCCT CTGGAAACATTCTTTCCCGCCGAGGACTACCATCAGAATTTCGCCCGCCGAAACCCAACCCAAGGCTACGTTACGCATGT AGCCAAACCCAAAGTAGAAAAGCTGATTCATGCTTTCCCCGACAAACTGAAAACACGAACACCTTAA
Upstream 100 bases:
>100_bases ATCCCTGTCGCCGCTCCTCTAGTTGCACTGATAGTCGCACTGATAGCATGCCAGCCGGTCCACAAGCCCGGCTGGCGTGA CACTCCCTACTGGAGGGACC
Downstream 100 bases:
>100_bases CGAGACCAATCTAAGGGAGTGCCTGATGACCCAAGCACTGTCCGCCAGCGGCTTTGATCTGACGCCCCTGAGCGAAGAAG AGAAGCAGGCCCGCGCACAA
Product: methionine sulfoxide peptide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNAVIPGTSLAIRPENFPDPIEDLPVNGTAKAVFAGGCFWCVEAVYLNLEGVNAVVSGYAGGHAAQANYEAVCTGTTGHA EVIEVEYNSAVISFGELLKVFFSVAHDPTHKDRQGNDRGTQYRSAVFYHDNAEKTVATAYIEQLNNAGAFIAPIATTVEP LETFFPAEDYHQNFARRNPTQGYVTHVAKPKVEKLIHAFPDKLKTRTP
Sequences:
>Translated_208_residues MNAVIPGTSLAIRPENFPDPIEDLPVNGTAKAVFAGGCFWCVEAVYLNLEGVNAVVSGYAGGHAAQANYEAVCTGTTGHA EVIEVEYNSAVISFGELLKVFFSVAHDPTHKDRQGNDRGTQYRSAVFYHDNAEKTVATAYIEQLNNAGAFIAPIATTVEP LETFFPAEDYHQNFARRNPTQGYVTHVAKPKVEKLIHAFPDKLKTRTP >Mature_208_residues MNAVIPGTSLAIRPENFPDPIEDLPVNGTAKAVFAGGCFWCVEAVYLNLEGVNAVVSGYAGGHAAQANYEAVCTGTTGHA EVIEVEYNSAVISFGELLKVFFSVAHDPTHKDRQGNDRGTQYRSAVFYHDNAEKTVATAYIEQLNNAGAFIAPIATTVEP LETFFPAEDYHQNFARRNPTQGYVTHVAKPKVEKLIHAFPDKLKTRTP
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=192, Percent_Identity=40.625, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI208609995, Length=163, Percent_Identity=43.558282208589, Blast_Score=127, Evalue=7e-30, Organism=Homo sapiens, GI208609993, Length=111, Percent_Identity=45.945945945946, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1790665, Length=158, Percent_Identity=40.5063291139241, Blast_Score=122, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17533973, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320881, Length=161, Percent_Identity=42.2360248447205, Blast_Score=110, Evalue=1e-25, Organism=Drosophila melanogaster, GI24664627, Length=156, Percent_Identity=35.8974358974359, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24664631, Length=156, Percent_Identity=35.8974358974359, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI45553131, Length=139, Percent_Identity=35.9712230215827, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 22643; Mature: 22643
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVIPGTSLAIRPENFPDPIEDLPVNGTAKAVFAGGCFWCVEAVYLNLEGVNAVVSGYA CCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCC GGHAAQANYEAVCTGTTGHAEVIEVEYNSAVISFGELLKVFFSVAHDPTHKDRQGNDRGT CCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QYRSAVFYHDNAEKTVATAYIEQLNNAGAFIAPIATTVEPLETFFPAEDYHQNFARRNPT CEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCC QGYVTHVAKPKVEKLIHAFPDKLKTRTP CCHHHHCCCHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MNAVIPGTSLAIRPENFPDPIEDLPVNGTAKAVFAGGCFWCVEAVYLNLEGVNAVVSGYA CCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCC GGHAAQANYEAVCTGTTGHAEVIEVEYNSAVISFGELLKVFFSVAHDPTHKDRQGNDRGT CCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QYRSAVFYHDNAEKTVATAYIEQLNNAGAFIAPIATTVEPLETFFPAEDYHQNFARRNPT CEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCC QGYVTHVAKPKVEKLIHAFPDKLKTRTP CCHHHHCCCHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]