Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834376

Identifier: 110834376

GI number: 110834376

Start: 1731143

End: 1731586

Strand: Direct

Name: 110834376

Synonym: ABO_1515

Alternate gene names: NA

Gene position: 1731143-1731586 (Clockwise)

Preceding gene: 110834375

Following gene: 110834384

Centisome position: 55.48

GC content: 56.08

Gene sequence:

>444_bases
TTGAACTGGCTGAACCGATTGTTTCGCCCTGAAAGCGACACACCAAAGTATTCCGAACACGACTTGCACCGCGCTGCTGC
CGCCTTGCTATTGGAGGTAGCGCGCACCGATGGCACCGTGGACCAGGCAGAAACCCAACGTCTGGTCAGCGCGGTCAAAC
AACGCTGGCAGCTGGATAGCCAAGAAATGCAGGATATCGTCTCTGAGCTGGAAAACCGGGTAGATCAAGCCACCGATCTA
TTTGAGTTCACTCTGCCGCTACGTGAACACTGGGGGCCAGAACAACGAGTAGCGCTGATCGATGAAATGTGGGCCATGGC
CGCTGCCGACGGCAAGGCCGATGTTCACGAGGAGCACTTGATCCGCCGGGTTAGCGATCTGCTCTATGTCTCCCACGGAG
ATTATATTCGCGCAAAACTCAAAGCCACCCGCATCGAGGCTTGA

Upstream 100 bases:

>100_bases
ACGACGATGCCATGGCCAGCGACTTGCTCGCCGACGGAATCCGCCGTTTTGCTAAAGACCAGCACGCGCTGGAAACCTTA
CTCATTGAAGAGGGGGTCAT

Downstream 100 bases:

>100_bases
TCTACCACATGCGGCTGGCAAGCCTCTACCAGCCGTCCTCCTCATACTCATCATTGAGTTCTGAATCTCGGGTCTCAATC
TCAGGGAATCGTAATGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNWLNRLFRPESDTPKYSEHDLHRAAAALLLEVARTDGTVDQAETQRLVSAVKQRWQLDSQEMQDIVSELENRVDQATDL
FEFTLPLREHWGPEQRVALIDEMWAMAAADGKADVHEEHLIRRVSDLLYVSHGDYIRAKLKATRIEA

Sequences:

>Translated_147_residues
MNWLNRLFRPESDTPKYSEHDLHRAAAALLLEVARTDGTVDQAETQRLVSAVKQRWQLDSQEMQDIVSELENRVDQATDL
FEFTLPLREHWGPEQRVALIDEMWAMAAADGKADVHEEHLIRRVSDLLYVSHGDYIRAKLKATRIEA
>Mature_147_residues
MNWLNRLFRPESDTPKYSEHDLHRAAAALLLEVARTDGTVDQAETQRLVSAVKQRWQLDSQEMQDIVSELENRVDQATDL
FEFTLPLREHWGPEQRVALIDEMWAMAAADGKADVHEEHLIRRVSDLLYVSHGDYIRAKLKATRIEA

Specific function: Unknown

COG id: COG4103

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17007; Mature: 17007

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLNRLFRPESDTPKYSEHDLHRAAAALLLEVARTDGTVDQAETQRLVSAVKQRWQLDS
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH
QEMQDIVSELENRVDQATDLFEFTLPLREHWGPEQRVALIDEMWAMAAADGKADVHEEHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IRRVSDLLYVSHGDYIRAKLKATRIEA
HHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNWLNRLFRPESDTPKYSEHDLHRAAAALLLEVARTDGTVDQAETQRLVSAVKQRWQLDS
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH
QEMQDIVSELENRVDQATDLFEFTLPLREHWGPEQRVALIDEMWAMAAADGKADVHEEHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IRRVSDLLYVSHGDYIRAKLKATRIEA
HHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA