Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834336

Identifier: 110834336

GI number: 110834336

Start: 1683334

End: 1683813

Strand: Direct

Name: 110834336

Synonym: ABO_1475

Alternate gene names: NA

Gene position: 1683334-1683813 (Clockwise)

Preceding gene: 110834332

Following gene: 110834337

Centisome position: 53.95

GC content: 56.88

Gene sequence:

>480_bases
GTGAGCCCCATCTGGCTATTAAAAACAGAACCTGACGCGTTCAGCATCGATGATCTGCGCGACAGCAAAAACGCCACTAG
CGGCTGGGACGGGGTACGCAACTATCAGGCCCGTAACCGCCTACGCGATGAGATGAAGGCCGGCGATACCGTGCTGATCT
ATCACTCCAGTTGCGCAGTCCCGGCCATTGTTGGTGAAGCCGTCGTTACCAGCGACCCTTACCCAGATCCAACCCAATTT
GACCCTGCTAGCGATGGCTATGATGCACGTAGCCGCCAGGATCATCCCCGCTGGTACCAGGCTGACGTACAGTATGTCTG
CCACTACCCGCACCCCCTGACACTCAAACAGATACAGCACCATCCAGAGTTTGCGGACATGGAACTGGTTGTGCGGCCTC
GCCTATCGGTGCAAAAAGTCTCCGAACGCCAGCTCCAGTTGATTCGACAGATGTGCCAGCTCGTTAGCGCCACCGCATAG

Upstream 100 bases:

>100_bases
CAATATGGCTACTAAAGCTTAACAAACCGACCTTCTCGGTTTACATTTGCGACACCATAGCCCAGGCCAAGGAGTGCCTG
CTTAAACAGCACCTACAGGA

Downstream 100 bases:

>100_bases
AACGCGGAGCGCACCACCTCCATTTGCGCGCACCAAAATGGCGCACAAACTAATGATAAAGAAGTAGAAGAGCCACCCCC
AACCGCCCGACATTCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSPIWLLKTEPDAFSIDDLRDSKNATSGWDGVRNYQARNRLRDEMKAGDTVLIYHSSCAVPAIVGEAVVTSDPYPDPTQF
DPASDGYDARSRQDHPRWYQADVQYVCHYPHPLTLKQIQHHPEFADMELVVRPRLSVQKVSERQLQLIRQMCQLVSATA

Sequences:

>Translated_159_residues
MSPIWLLKTEPDAFSIDDLRDSKNATSGWDGVRNYQARNRLRDEMKAGDTVLIYHSSCAVPAIVGEAVVTSDPYPDPTQF
DPASDGYDARSRQDHPRWYQADVQYVCHYPHPLTLKQIQHHPEFADMELVVRPRLSVQKVSERQLQLIRQMCQLVSATA
>Mature_158_residues
SPIWLLKTEPDAFSIDDLRDSKNATSGWDGVRNYQARNRLRDEMKAGDTVLIYHSSCAVPAIVGEAVVTSDPYPDPTQFD
PASDGYDARSRQDHPRWYQADVQYVCHYPHPLTLKQIQHHPEFADMELVVRPRLSVQKVSERQLQLIRQMCQLVSATA

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=35.7575757575758, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=35.7575757575758, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=35.7575757575758, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI83267859, Length=107, Percent_Identity=43.9252336448598, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI40806219, Length=107, Percent_Identity=43.9252336448598, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18167; Mature: 18035

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIWLLKTEPDAFSIDDLRDSKNATSGWDGVRNYQARNRLRDEMKAGDTVLIYHSSCAV
CCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
PAIVGEAVVTSDPYPDPTQFDPASDGYDARSRQDHPRWYQADVQYVCHYPHPLTLKQIQH
HHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHC
HPEFADMELVVRPRLSVQKVSERQLQLIRQMCQLVSATA
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPIWLLKTEPDAFSIDDLRDSKNATSGWDGVRNYQARNRLRDEMKAGDTVLIYHSSCAV
CCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
PAIVGEAVVTSDPYPDPTQFDPASDGYDARSRQDHPRWYQADVQYVCHYPHPLTLKQIQH
HHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHC
HPEFADMELVVRPRLSVQKVSERQLQLIRQMCQLVSATA
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA