Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834259

Identifier: 110834259

GI number: 110834259

Start: 1591019

End: 1593697

Strand: Direct

Name: 110834259

Synonym: ABO_1398

Alternate gene names: NA

Gene position: 1591019-1593697 (Clockwise)

Preceding gene: 110834258

Following gene: 110834261

Centisome position: 50.99

GC content: 56.36

Gene sequence:

>2679_bases
ATGGATTGGCGAACTCTGGGCCGAAAAAGACGCATTATTGGAAAGCAAAACGCCGCACGCTTGAGAAATCTAGCGTCGGG
CATCTGGCGCATTTTGAGACTTTATATGTTTGGCCGATTCCTAAAACCCCGCTGGCAACACGCCAAGCCCGAGATTCGAC
TCAAAGCCATTGAGCAGCTTGACCACAGCAACGATGCCGACCTGCTTCATCAACTGGCACGAGGCGATGCCAGTGCGTTA
GTACGCGCTGCAGCCACCGCTAAGCTCACTGATTTTGCCGCGCTAGACGAAGTCCATCAGCGTGATGAAACACCATCCGT
TCGTGAAGCGGCCTCCATGCGCATTATGTCGTTGCTAGCAGGCACCACGGATGACTCACCCAACAGCGACACTCGCCTTC
GCCTGATTCGCCTTACCGATAATCAGGACGTGCTTGCCCATGTTGCGGCTCATAGCCCGGACATGCACAGCCGCATGGCG
GCCCTTGAACGGCTCAGCGACGAAGCCGTACTCTACCAGTTGGCCCTGGATGCCCCCACGCAAGCCCTGCGTGTTGCTTG
CGTGCAGAACATCAGCTCTCTCTCCCTGCTCAAACGCCTAGCTAAACACGGTCGCGACAAGCGGGTTACTCGTTTGGCTC
GAGATCAAGCCCGTGAGCTCCAACAACAACAGCAACAAACTGAGAGGGAAACCGTTAAGGTCTACCACCTTGCAGACCGC
CTGGAGCAGCATGCCCGACGGCGCGTGGATGCCCTTTACGGACCCCAGCTGGAGCAGCTAGAACAGCAATGGCGACAGCT
TTCACCCCAAGCCTCAGCGGATATTGCCTCACGGATCCAACAAGCGCTGCATCAATGTCGTAACCAGCTGACCGAATCGC
AAGAGCAGACACGCCAACAGGCTCTTGCTGAAACCGCTAAAGCAGAGCGTGAAGCTGCCGCCCATACTCTATTTCAATTA
TTGAGCCAAGCTACGCCGGAAACCTGGGATCATCACTTAGGCGAAATGCGCTCAGCATTGGCGACTCAGCGTCGCCGCTG
GAATAGTGCGGACGAACACGCTCAGGCGCTCGATCAAGACCGCATGGCGTTCAACGATTTGGTGACCGCGTTCGAGCAAC
TGCTCACACTGGCCACCGACATCAATGCCGCAGACTCACAAGAAACATTGACAGAATTAGCAACACGCTGGCCGAAAGAG
TACCAGCCGCCATCCGCATTACTCGCACTGCGCACCCGTAAAAAAGACGATACTGCTGAAACAGCCGAGCCCGAGCGGGC
CAAGCCTGCACAGCCACACAGAGGTCTATTAGTAGCTCTCAAACGAGAGCTTCGCCAGGGTAACCTGCGCCATGCGAACC
GCCTTTGGCATAGGGCTCAGACGATTATCGACACCCACAATGACGATGCTCTTAGTGCCGAATTAAGCAAATTAGCCGCG
CGCCGGGCGGAATTGCAAGACTGGCACCGCTTTGCCGCCGAACCGAAAAAAGTGGCGCTGTGTGAGCAAATGGAAGCCCT
TGATGGCACCACCATGGATGCCCCCGAGCTTGCCACTGCCACTCAGGCTCTCCACGACGAGTGGCGCTCGCTGATGAGTT
CGGACCAAGATGAGGACCAGTCTCTCTGGGCCCGATTCAAAGAAGCATCCGATAAGGCCTACCAGCCTTGTCGTGCACAT
TTTGCTGAGCTGGATGCTATCAAGGCCAGCAATCTGGAAAAGCGTCAGACACTTTGCCAACAACTGGATAACTTTATTAC
CGTGCAGAACTGGGAAAAAGCGGATTGGCACGGCGTCTGGCAAATTCGTCAGCAGGCTCCCAAAGACTGGAAGGCCCTGC
ACCCCATTCGCTTTACCGATGCACGGGATATTCAGAAACGCTTTTCCGCTCTGCTGGCCCAGCTCGACGAACAGTTAAAT
GGCTATATTGAGAAAGCGGAGAACGAACGTAAACAGTTGCTTGATCAGGCTCGTGCTCTAATGGAGCTTGATGATCCCCA
ACAGGCAACCCGCGAAGCACAAGCCATCCAGAAACGCTGGCGACAATCAGCCTGGCTACCTCCCGCACAGCACAGGGCTT
TGCAAAAGCAGTTTCGTAAAACCATGGACGCGCTTTTCGATGCTCGCAATCGGGATATGGCCGCCCACCGAAAACGGCAG
GAACAAGCGGGACAAACACTGGCCACACATATCAGCGCGCTTGAAGACTGCCTGGCTCAACCTTTCACGGACGACAGCGC
AGACAATTTGAGCCGCGCATCGGCCGCAGTGGATGAACATCTTGGTGGCGAGCTCCCGCAACCCTTGGTTCGCAAAGCTC
AACAGCTCAAACGCCGCGCCAGTGAACGCCTCCAGCAACTCAGCCGCTGGCAACAGTGGCAGCAATTGCGCAATGCCGTC
GCGGGCTTGCCGGAAACTGCCGGAAACGAGGAAAGTGACGATGCCCTCACCTTAGCGGTGGCCTTTGAAGCCTTGGCCGG
CGTGCCTAGCCCAGAACTAGAGCGCCAGCGTCGCTTGCAATGGCAACTAGAGCAGCTACCCGGAGCGATGAAACGACAGC
AGTTTGACGCCCGAGAAGAGATGCAGCGATTGCTAGCAGACCACGCGTTGCCGGTGTCTACTGCGATCAAGGCACGGCTA
CATCATGCCATCGCAGTGCTGGAGCCGGGCAATGCGTAA

Upstream 100 bases:

>100_bases
TGGACGAGGTTGAAATCGTTGTGCAGCAACGCGTTATTCCCGCCTGGGCCTCAGAGGGCAACTATGAAGACGACGCGGCA
TTCCGCGCACGTTTTCAACA

Downstream 100 bases:

>100_bases
TCGGTTACCTCGACCTAACCGCCCTTTTAAGGACTGAAAAGACAGCAATGGTTCCGCCCCTAACTCGCAGGCGTTCCCAT
GGGTTGTTTCGCGAATGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 892; Mature: 892

Protein sequence:

>892_residues
MDWRTLGRKRRIIGKQNAARLRNLASGIWRILRLYMFGRFLKPRWQHAKPEIRLKAIEQLDHSNDADLLHQLARGDASAL
VRAAATAKLTDFAALDEVHQRDETPSVREAASMRIMSLLAGTTDDSPNSDTRLRLIRLTDNQDVLAHVAAHSPDMHSRMA
ALERLSDEAVLYQLALDAPTQALRVACVQNISSLSLLKRLAKHGRDKRVTRLARDQARELQQQQQQTERETVKVYHLADR
LEQHARRRVDALYGPQLEQLEQQWRQLSPQASADIASRIQQALHQCRNQLTESQEQTRQQALAETAKAEREAAAHTLFQL
LSQATPETWDHHLGEMRSALATQRRRWNSADEHAQALDQDRMAFNDLVTAFEQLLTLATDINAADSQETLTELATRWPKE
YQPPSALLALRTRKKDDTAETAEPERAKPAQPHRGLLVALKRELRQGNLRHANRLWHRAQTIIDTHNDDALSAELSKLAA
RRAELQDWHRFAAEPKKVALCEQMEALDGTTMDAPELATATQALHDEWRSLMSSDQDEDQSLWARFKEASDKAYQPCRAH
FAELDAIKASNLEKRQTLCQQLDNFITVQNWEKADWHGVWQIRQQAPKDWKALHPIRFTDARDIQKRFSALLAQLDEQLN
GYIEKAENERKQLLDQARALMELDDPQQATREAQAIQKRWRQSAWLPPAQHRALQKQFRKTMDALFDARNRDMAAHRKRQ
EQAGQTLATHISALEDCLAQPFTDDSADNLSRASAAVDEHLGGELPQPLVRKAQQLKRRASERLQQLSRWQQWQQLRNAV
AGLPETAGNEESDDALTLAVAFEALAGVPSPELERQRRLQWQLEQLPGAMKRQQFDAREEMQRLLADHALPVSTAIKARL
HHAIAVLEPGNA

Sequences:

>Translated_892_residues
MDWRTLGRKRRIIGKQNAARLRNLASGIWRILRLYMFGRFLKPRWQHAKPEIRLKAIEQLDHSNDADLLHQLARGDASAL
VRAAATAKLTDFAALDEVHQRDETPSVREAASMRIMSLLAGTTDDSPNSDTRLRLIRLTDNQDVLAHVAAHSPDMHSRMA
ALERLSDEAVLYQLALDAPTQALRVACVQNISSLSLLKRLAKHGRDKRVTRLARDQARELQQQQQQTERETVKVYHLADR
LEQHARRRVDALYGPQLEQLEQQWRQLSPQASADIASRIQQALHQCRNQLTESQEQTRQQALAETAKAEREAAAHTLFQL
LSQATPETWDHHLGEMRSALATQRRRWNSADEHAQALDQDRMAFNDLVTAFEQLLTLATDINAADSQETLTELATRWPKE
YQPPSALLALRTRKKDDTAETAEPERAKPAQPHRGLLVALKRELRQGNLRHANRLWHRAQTIIDTHNDDALSAELSKLAA
RRAELQDWHRFAAEPKKVALCEQMEALDGTTMDAPELATATQALHDEWRSLMSSDQDEDQSLWARFKEASDKAYQPCRAH
FAELDAIKASNLEKRQTLCQQLDNFITVQNWEKADWHGVWQIRQQAPKDWKALHPIRFTDARDIQKRFSALLAQLDEQLN
GYIEKAENERKQLLDQARALMELDDPQQATREAQAIQKRWRQSAWLPPAQHRALQKQFRKTMDALFDARNRDMAAHRKRQ
EQAGQTLATHISALEDCLAQPFTDDSADNLSRASAAVDEHLGGELPQPLVRKAQQLKRRASERLQQLSRWQQWQQLRNAV
AGLPETAGNEESDDALTLAVAFEALAGVPSPELERQRRLQWQLEQLPGAMKRQQFDAREEMQRLLADHALPVSTAIKARL
HHAIAVLEPGNA
>Mature_892_residues
MDWRTLGRKRRIIGKQNAARLRNLASGIWRILRLYMFGRFLKPRWQHAKPEIRLKAIEQLDHSNDADLLHQLARGDASAL
VRAAATAKLTDFAALDEVHQRDETPSVREAASMRIMSLLAGTTDDSPNSDTRLRLIRLTDNQDVLAHVAAHSPDMHSRMA
ALERLSDEAVLYQLALDAPTQALRVACVQNISSLSLLKRLAKHGRDKRVTRLARDQARELQQQQQQTERETVKVYHLADR
LEQHARRRVDALYGPQLEQLEQQWRQLSPQASADIASRIQQALHQCRNQLTESQEQTRQQALAETAKAEREAAAHTLFQL
LSQATPETWDHHLGEMRSALATQRRRWNSADEHAQALDQDRMAFNDLVTAFEQLLTLATDINAADSQETLTELATRWPKE
YQPPSALLALRTRKKDDTAETAEPERAKPAQPHRGLLVALKRELRQGNLRHANRLWHRAQTIIDTHNDDALSAELSKLAA
RRAELQDWHRFAAEPKKVALCEQMEALDGTTMDAPELATATQALHDEWRSLMSSDQDEDQSLWARFKEASDKAYQPCRAH
FAELDAIKASNLEKRQTLCQQLDNFITVQNWEKADWHGVWQIRQQAPKDWKALHPIRFTDARDIQKRFSALLAQLDEQLN
GYIEKAENERKQLLDQARALMELDDPQQATREAQAIQKRWRQSAWLPPAQHRALQKQFRKTMDALFDARNRDMAAHRKRQ
EQAGQTLATHISALEDCLAQPFTDDSADNLSRASAAVDEHLGGELPQPLVRKAQQLKRRASERLQQLSRWQQWQQLRNAV
AGLPETAGNEESDDALTLAVAFEALAGVPSPELERQRRLQWQLEQLPGAMKRQQFDAREEMQRLLADHALPVSTAIKARL
HHAIAVLEPGNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101877; Mature: 101877

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRTLGRKRRIIGKQNAARLRNLASGIWRILRLYMFGRFLKPRWQHAKPEIRLKAIEQL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
DHSNDADLLHQLARGDASALVRAAATAKLTDFAALDEVHQRDETPSVREAASMRIMSLLA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GTTDDSPNSDTRLRLIRLTDNQDVLAHVAAHSPDMHSRMAALERLSDEAVLYQLALDAPT
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCHH
QALRVACVQNISSLSLLKRLAKHGRDKRVTRLARDQARELQQQQQQTERETVKVYHLADR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQHARRRVDALYGPQLEQLEQQWRQLSPQASADIASRIQQALHQCRNQLTESQEQTRQQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAETAKAEREAAAHTLFQLLSQATPETWDHHLGEMRSALATQRRRWNSADEHAQALDQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RMAFNDLVTAFEQLLTLATDINAADSQETLTELATRWPKEYQPPSALLALRTRKKDDTAE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
TAEPERAKPAQPHRGLLVALKRELRQGNLRHANRLWHRAQTIIDTHNDDALSAELSKLAA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RRAELQDWHRFAAEPKKVALCEQMEALDGTTMDAPELATATQALHDEWRSLMSSDQDEDQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
SLWARFKEASDKAYQPCRAHFAELDAIKASNLEKRQTLCQQLDNFITVQNWEKADWHGVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCCCCCHHHHH
QIRQQAPKDWKALHPIRFTDARDIQKRFSALLAQLDEQLNGYIEKAENERKQLLDQARAL
HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MELDDPQQATREAQAIQKRWRQSAWLPPAQHRALQKQFRKTMDALFDARNRDMAAHRKRQ
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQAGQTLATHISALEDCLAQPFTDDSADNLSRASAAVDEHLGGELPQPLVRKAQQLKRRA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SERLQQLSRWQQWQQLRNAVAGLPETAGNEESDDALTLAVAFEALAGVPSPELERQRRLQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
WQLEQLPGAMKRQQFDAREEMQRLLADHALPVSTAIKARLHHAIAVLEPGNA
HHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MDWRTLGRKRRIIGKQNAARLRNLASGIWRILRLYMFGRFLKPRWQHAKPEIRLKAIEQL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
DHSNDADLLHQLARGDASALVRAAATAKLTDFAALDEVHQRDETPSVREAASMRIMSLLA
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GTTDDSPNSDTRLRLIRLTDNQDVLAHVAAHSPDMHSRMAALERLSDEAVLYQLALDAPT
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCHH
QALRVACVQNISSLSLLKRLAKHGRDKRVTRLARDQARELQQQQQQTERETVKVYHLADR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQHARRRVDALYGPQLEQLEQQWRQLSPQASADIASRIQQALHQCRNQLTESQEQTRQQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAETAKAEREAAAHTLFQLLSQATPETWDHHLGEMRSALATQRRRWNSADEHAQALDQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RMAFNDLVTAFEQLLTLATDINAADSQETLTELATRWPKEYQPPSALLALRTRKKDDTAE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
TAEPERAKPAQPHRGLLVALKRELRQGNLRHANRLWHRAQTIIDTHNDDALSAELSKLAA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RRAELQDWHRFAAEPKKVALCEQMEALDGTTMDAPELATATQALHDEWRSLMSSDQDEDQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
SLWARFKEASDKAYQPCRAHFAELDAIKASNLEKRQTLCQQLDNFITVQNWEKADWHGVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCCCCCHHHHH
QIRQQAPKDWKALHPIRFTDARDIQKRFSALLAQLDEQLNGYIEKAENERKQLLDQARAL
HHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MELDDPQQATREAQAIQKRWRQSAWLPPAQHRALQKQFRKTMDALFDARNRDMAAHRKRQ
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQAGQTLATHISALEDCLAQPFTDDSADNLSRASAAVDEHLGGELPQPLVRKAQQLKRRA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SERLQQLSRWQQWQQLRNAVAGLPETAGNEESDDALTLAVAFEALAGVPSPELERQRRLQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
WQLEQLPGAMKRQQFDAREEMQRLLADHALPVSTAIKARLHHAIAVLEPGNA
HHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA