| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is modB [H]
Identifier: 110834116
GI number: 110834116
Start: 1429903
End: 1430592
Strand: Direct
Name: modB [H]
Synonym: ABO_1255
Alternate gene names: 110834116
Gene position: 1429903-1430592 (Clockwise)
Preceding gene: 110834115
Following gene: 110834117
Centisome position: 45.83
GC content: 58.84
Gene sequence:
>690_bases ATGATGCTTTCTGAGGGTGATTGGCTGGCGTTGAGTGTCAGTGTTCAGTTGGCGTTGCTGACCACGGTTATCCTGATCGT GATTTGCACACCGCTGGCCTGGTGGCTAGCGCGTCGCCGTTTGCCCGGCCAAGCATTGCTGGAGGCCGTGTTGGCGCTAC CTTTGGTATTGCCCCCCTCGGTGTTGGGATTTTATTTGTTGATCGGATTGGGGCCGAATGGGCCTGGGGGCTGGTTGGCT AATGTGGTTGAACAACGCTCGCTGGCCTTCACTTTTACCGGGCTGGTGGTGGGGTCGGTGGTGTATTCCTTGCCCTTTGT TCTGCAGCCGCTAAAGAATGCGTTTTCCGCTATCGACTCCAAACAGTTGGATATGGCTGCAGTGACGGGTGCCGGGCCAC GGGATCGATTCCTCTCTCTGGTATTGCCCCAGTGCCGGGAAGGGTATGTCTCTGCGGCGATTCTGGGCTTCGCCCATACC TTAGGCGAGTTTGGTGTGGTGCTGATGATTGGTGGCAGCCTGTCCGGACAAACCCGGGTAGCCTCGGTGGCGCTGTATGA GCATGTGGACGCGGGGGATTATGTTAGTGCTCATCGGCTTGCCGCGGTTCTGCTTGGCCTGTCGTTGTTGCTGCTGTGGG GGCTGTTCCGCTGGCAGCGTGGCCGTTCCGGCCCAGGAGCCATGCCATGA
Upstream 100 bases:
>100_bases GGGCTGCTAGGCAAGAATGATACTGCGCAGCGGTTTTATGATTTCCTTTTCAGCCCTCAAGCCCGAGCCCTAATTGAACA GACAGGTTATCAGGTGCCCG
Downstream 100 bases:
>100_bases GTCTGGCGTTGTCGATAAGCGGGCGGCGTGGTGCTTTCCAGCTGCAAGTGGATGCCACCCTGCAACCCGAGGGGGTTACC GTGCTGTTCGGCGCTTCCGG
Product: molybdate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MMLSEGDWLALSVSVQLALLTTVILIVICTPLAWWLARRRLPGQALLEAVLALPLVLPPSVLGFYLLIGLGPNGPGGWLA NVVEQRSLAFTFTGLVVGSVVYSLPFVLQPLKNAFSAIDSKQLDMAAVTGAGPRDRFLSLVLPQCREGYVSAAILGFAHT LGEFGVVLMIGGSLSGQTRVASVALYEHVDAGDYVSAHRLAAVLLGLSLLLLWGLFRWQRGRSGPGAMP
Sequences:
>Translated_229_residues MMLSEGDWLALSVSVQLALLTTVILIVICTPLAWWLARRRLPGQALLEAVLALPLVLPPSVLGFYLLIGLGPNGPGGWLA NVVEQRSLAFTFTGLVVGSVVYSLPFVLQPLKNAFSAIDSKQLDMAAVTGAGPRDRFLSLVLPQCREGYVSAAILGFAHT LGEFGVVLMIGGSLSGQTRVASVALYEHVDAGDYVSAHRLAAVLLGLSLLLLWGLFRWQRGRSGPGAMP >Mature_229_residues MMLSEGDWLALSVSVQLALLTTVILIVICTPLAWWLARRRLPGQALLEAVLALPLVLPPSVLGFYLLIGLGPNGPGGWLA NVVEQRSLAFTFTGLVVGSVVYSLPFVLQPLKNAFSAIDSKQLDMAAVTGAGPRDRFLSLVLPQCREGYVSAAILGFAHT LGEFGVVLMIGGSLSGQTRVASVALYEHVDAGDYVSAHRLAAVLLGLSLLLLWGLFRWQRGRSGPGAMP
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=174, Percent_Identity=32.183908045977, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1786980, Length=228, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082099, Length=223, Percent_Identity=29.1479820627803, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24347; Mature: 24347
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLSEGDWLALSVSVQLALLTTVILIVICTPLAWWLARRRLPGQALLEAVLALPLVLPPS CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH VLGFYLLIGLGPNGPGGWLANVVEQRSLAFTFTGLVVGSVVYSLPFVLQPLKNAFSAIDS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQLDMAAVTGAGPRDRFLSLVLPQCREGYVSAAILGFAHTLGEFGVVLMIGGSLSGQTRV CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHH ASVALYEHVDAGDYVSAHRLAAVLLGLSLLLLWGLFRWQRGRSGPGAMP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMLSEGDWLALSVSVQLALLTTVILIVICTPLAWWLARRRLPGQALLEAVLALPLVLPPS CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH VLGFYLLIGLGPNGPGGWLANVVEQRSLAFTFTGLVVGSVVYSLPFVLQPLKNAFSAIDS HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQLDMAAVTGAGPRDRFLSLVLPQCREGYVSAAILGFAHTLGEFGVVLMIGGSLSGQTRV CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHH ASVALYEHVDAGDYVSAHRLAAVLLGLSLLLLWGLFRWQRGRSGPGAMP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]