Click here to switch to the map view.

The map label for this gene is ompH [C]

Identifier: 110834013

GI number: 110834013

Start: 1310479

End: 1310976

Strand: Direct

Name: ompH [C]

Synonym: ABO_1152

Alternate gene names: 110834013

Gene position: 1310479-1310976 (Clockwise)

Preceding gene: 110834012

Following gene: 110834014

Centisome position: 42.0

GC content: 46.79

Gene sequence:

>498_bases
ATGGTGAAAAAAACACTGGTAGCATTGGCACTGTTTTTGCCCTCACTGGCTATGGCTGAGGCTTCTGTTGGGGTTCTTGA
CCCGATTGCTGCGTTACAATCGTCAAATAATGTGAAGACGAGAATGTCCTCACTGGAGAATGAGCTGTCTGGGGACGAGC
AAAAGCTCAATCGCTTGCAAAACGATGTGGGGAAGCTGCAACAAAAACTGCAAAAAGAAGCCATGACCATGTCCGCGGAT
GAACAAGATACGCTGAAGACTCAGGGTCAGCAGAAAATGCTCGAAATTCAAAGCCTGCAACGCAAACTGCAAAAGCGTGC
TAGCGAAGCACAACGCGAAATTCTGTCAGAAATGCAGCCTAAGCTTAAAAAGGCCATAGAGTCTGTGGCTAAACGTGAAA
AGCTGGATGTAGTGCTCAATGCCCAAGCTGTGATGTACACCAAGCCGGATCTAGATATTACTGAAGCGGTGGGCAAGCAA
CTGAACAGTATGAAATAA

Upstream 100 bases:

>100_bases
CCGCTTAGCTTCAACTTGGCGAAAGCGCTGGATGACCAGCCTGGCGATGACACGGAAGTATTCCAATTTTCTTTGGGTCA
GACTTTTTAGGAGTTTAATA

Downstream 100 bases:

>100_bases
TGTTGACTCTCGGTGAGTTAGCAAAAAAACTGGATGCGGAGTTGATCGGTGAGGCCAGCCATGTTGTGGACGGTTTGGGA
ACAATCCAGTCCGCAGGGCC

Product: outer membrane protein OmpH

Products: NA

Alternate protein names: Outer Membrane Chaperone Skp; Outer Membrane Protein OmpH; OmpH Family Outer Membrane Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVKKTLVALALFLPSLAMAEASVGVLDPIAALQSSNNVKTRMSSLENELSGDEQKLNRLQNDVGKLQQKLQKEAMTMSAD
EQDTLKTQGQQKMLEIQSLQRKLQKRASEAQREILSEMQPKLKKAIESVAKREKLDVVLNAQAVMYTKPDLDITEAVGKQ
LNSMK

Sequences:

>Translated_165_residues
MVKKTLVALALFLPSLAMAEASVGVLDPIAALQSSNNVKTRMSSLENELSGDEQKLNRLQNDVGKLQQKLQKEAMTMSAD
EQDTLKTQGQQKMLEIQSLQRKLQKRASEAQREILSEMQPKLKKAIESVAKREKLDVVLNAQAVMYTKPDLDITEAVGKQ
LNSMK
>Mature_165_residues
MVKKTLVALALFLPSLAMAEASVGVLDPIAALQSSNNVKTRMSSLENELSGDEQKLNRLQNDVGKLQQKLQKEAMTMSAD
EQDTLKTQGQQKMLEIQSLQRKLQKRASEAQREILSEMQPKLKKAIESVAKREKLDVVLNAQAVMYTKPDLDITEAVGKQ
LNSMK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Either In The Nucleoid (Chromatin) Or In The Outer Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18368; Mature: 18368

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKTLVALALFLPSLAMAEASVGVLDPIAALQSSNNVKTRMSSLENELSGDEQKLNRLQ
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH
NDVGKLQQKLQKEAMTMSADEQDTLKTQGQQKMLEIQSLQRKLQKRASEAQREILSEMQP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKKAIESVAKREKLDVVLNAQAVMYTKPDLDITEAVGKQLNSMK
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVKKTLVALALFLPSLAMAEASVGVLDPIAALQSSNNVKTRMSSLENELSGDEQKLNRLQ
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH
NDVGKLQQKLQKEAMTMSADEQDTLKTQGQQKMLEIQSLQRKLQKRASEAQREILSEMQP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKKAIESVAKREKLDVVLNAQAVMYTKPDLDITEAVGKQLNSMK
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA