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The map label for this gene is trx-1 [H]

Identifier: 110833983

GI number: 110833983

Start: 1274696

End: 1275565

Strand: Direct

Name: trx-1 [H]

Synonym: ABO_1122

Alternate gene names: 110833983

Gene position: 1274696-1275565 (Clockwise)

Preceding gene: 110833978

Following gene: 110833984

Centisome position: 40.85

GC content: 56.44

Gene sequence:

>870_bases
TTGCAGCCAAACAGCCCTATCATTGAAGCTACCGAGCAGAATATTCAGCAAATCCTTGAACAGTCCCAGCAGATTCCGGT
GATCGTGGGTTTCTGGGCGAGTTGGAGCGAACCCTGTCAGCAGATGGCGCCAATCCTAGAGCGCCTAGTCAACGAATATC
AGGGCAAGGTGATTCTGGCCAATGTGAATGCCGATGAGCAGCAAATGTTGGCCAGTCAGTTTGGTGTGCGCAGCCTGCCC
AGTCTCAAACTGGTGTTTCAAGGAAAGTTGGTCAGCGAGTTGGATGGAGCCCAGACCGAAGGCGCGATACGCCAGTGGTT
GGCTCCTGTGGTGGACCCCGAAGCCGCACAGCAGCAACAGGAAGAAGGGTTTATCGAGCAGGTGCGTATGGCCATTGAAG
CCGGCCACACCGAGCAAGCAGAAGGGGCATTGCGCCAGACGCTGGAGCAGAGCCCAGACAAGCATGCCATTCGCGCCTTG
TTGGTAGAACTGCTGTTGGGTGAAGGCCGTCTGGATGATGCCCAGTCGGTGCTGGCACAAGTGACAGAAGATGCGGAGCC
TCTACGGCCGTTCCGGGCGCGCTTTGCATTGTTGGATAAATTGGAAGGTGCAGGGCAAAGCTTGGCGGATTTGTCTGCCC
GTATTGCCGACAAGCCGACTGCCGAGGATCTTTATGCCTACGGGCTGCAGGCCGCTGCCGCTGGCCAGTTCAAGCAGGGG
CTTGAGGCGCTGCTGCAGCTGCTCTGCAACCACAGTGATTTCCGCGATGGAGTGGCGCGTAATGCGTTGCTAGAAGTGTT
CGAATGCCTCCCTAAAGGCGATCCACTGGCCAGCGAATATCGCCGTAAGATGTTTAACTACCTCTACTAA

Upstream 100 bases:

>100_bases
AACGCGCTAACGCCTCAGGTTGCACAGGGTTTAACCAGATTTAATCTGGACGATAGCTTACACTTGGTACCACTTTGAAT
GCGTTTTCAGGAGCATAGCG

Downstream 100 bases:

>100_bases
TCTATCTGCTTACTGCGGGTAACGGGATCTCCGTTGCCCGTCTTGCCTACTTTTTGTGCCGGATTGCCGCTCAGAATGGC
CCTTTGTCCTTTTATTGTGC

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQPNSPIIEATEQNIQQILEQSQQIPVIVGFWASWSEPCQQMAPILERLVNEYQGKVILANVNADEQQMLASQFGVRSLP
SLKLVFQGKLVSELDGAQTEGAIRQWLAPVVDPEAAQQQQEEGFIEQVRMAIEAGHTEQAEGALRQTLEQSPDKHAIRAL
LVELLLGEGRLDDAQSVLAQVTEDAEPLRPFRARFALLDKLEGAGQSLADLSARIADKPTAEDLYAYGLQAAAAGQFKQG
LEALLQLLCNHSDFRDGVARNALLEVFECLPKGDPLASEYRRKMFNYLY

Sequences:

>Translated_289_residues
MQPNSPIIEATEQNIQQILEQSQQIPVIVGFWASWSEPCQQMAPILERLVNEYQGKVILANVNADEQQMLASQFGVRSLP
SLKLVFQGKLVSELDGAQTEGAIRQWLAPVVDPEAAQQQQEEGFIEQVRMAIEAGHTEQAEGALRQTLEQSPDKHAIRAL
LVELLLGEGRLDDAQSVLAQVTEDAEPLRPFRARFALLDKLEGAGQSLADLSARIADKPTAEDLYAYGLQAAAAGQFKQG
LEALLQLLCNHSDFRDGVARNALLEVFECLPKGDPLASEYRRKMFNYLY
>Mature_289_residues
MQPNSPIIEATEQNIQQILEQSQQIPVIVGFWASWSEPCQQMAPILERLVNEYQGKVILANVNADEQQMLASQFGVRSLP
SLKLVFQGKLVSELDGAQTEGAIRQWLAPVVDPEAAQQQQEEGFIEQVRMAIEAGHTEQAEGALRQTLEQSPDKHAIRAL
LVELLLGEGRLDDAQSVLAQVTEDAEPLRPFRARFALLDKLEGAGQSLADLSARIADKPTAEDLYAYGLQAAAAGQFKQG
LEALLQLLCNHSDFRDGVARNALLEVFECLPKGDPLASEYRRKMFNYLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=286, Percent_Identity=32.5174825174825, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788936, Length=101, Percent_Identity=35.6435643564356, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082331, Length=81, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI212646193, Length=89, Percent_Identity=35.9550561797753, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI28573567, Length=107, Percent_Identity=41.1214953271028, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32012; Mature: 32012

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPNSPIIEATEQNIQQILEQSQQIPVIVGFWASWSEPCQQMAPILERLVNEYQGKVILA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NVNADEQQMLASQFGVRSLPSLKLVFQGKLVSELDGAQTEGAIRQWLAPVVDPEAAQQQQ
ECCCCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
EEGFIEQVRMAIEAGHTEQAEGALRQTLEQSPDKHAIRALLVELLLGEGRLDDAQSVLAQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
VTEDAEPLRPFRARFALLDKLEGAGQSLADLSARIADKPTAEDLYAYGLQAAAAGQFKQG
HHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LEALLQLLCNHSDFRDGVARNALLEVFECLPKGDPLASEYRRKMFNYLY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPNSPIIEATEQNIQQILEQSQQIPVIVGFWASWSEPCQQMAPILERLVNEYQGKVILA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NVNADEQQMLASQFGVRSLPSLKLVFQGKLVSELDGAQTEGAIRQWLAPVVDPEAAQQQQ
ECCCCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
EEGFIEQVRMAIEAGHTEQAEGALRQTLEQSPDKHAIRALLVELLLGEGRLDDAQSVLAQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
VTEDAEPLRPFRARFALLDKLEGAGQSLADLSARIADKPTAEDLYAYGLQAAAAGQFKQG
HHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LEALLQLLCNHSDFRDGVARNALLEVFECLPKGDPLASEYRRKMFNYLY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]