| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yceG [C]
Identifier: 110833934
GI number: 110833934
Start: 1215070
End: 1216128
Strand: Direct
Name: yceG [C]
Synonym: ABO_1073
Alternate gene names: 110833934
Gene position: 1215070-1216128 (Clockwise)
Preceding gene: 110833933
Following gene: 110833935
Centisome position: 38.94
GC content: 54.01
Gene sequence:
>1059_bases ATGCGTAAAAAAATCCGTATTTTTGGACTGTTGGTTGTCCTACTGATAGTCGCTGTTCCTGTGGCGGGGGCCTGGGTCAG TAGTTATCTACATCGCCCGTTACCGATTTCTGAAACATTTACCGTGGAGGTGACTAAAGGGGCGGGGCTGAGCCGTGTGC TCTACAACCTCAAACGTGACGGTATTCTAGGTGAGGGGGTTGACGCCCGGTGCCGTCGAGTGGGTGCGCGAATTTATTCT GCTTTCACCGGCATGGATGGGCGCATGCACATGGGCGAGTATCAACTCAAACCCGGTGATTCGTTATTGTCGTTGTTGGA AAAAATGGATCGGGGCGATGTACTGCAACGTAGTCTGACGTTAGTCGAAGGCTGGAATTTCCGAGAATTGCGAGCCCGGT TGGCTGCCCTGGAAACCCTGGAACATCGACTGAAAGGGCTGACTGACGAACAAGTCATGGCGAAACTCGGTCGCCCTGAT TTACATCCCGAAGGCTGGTTTGCACCGGAAACCTATTTTTATACCCGTGGCACATCAGACCTGACTATCCTGGCCCGGGC ACTGGAGCGGCAGGAGCGTATTCTGGACGCCGCTTGGCAGCAACGGGCCAAGGATTTGCCTTTGCAAACACCATATGAAG CGCTGATTATGGCCTCCATCGTTGAACGGGAAACCGGTGTCCCAGAAGAGCGATCTGAAATTGCAGGCGTTTTTACCAAC CGTTTGAATAAGGGTATGCGCTTGCAAACTGACCCCACCGTGATTTACGGCATGGGTGAAGCCTATAACGGAAATATTCG CCGCTCGGACCTGCGTCGTGCGACACCTTACAATACCTATGTGATTGATGGCCTGCCGCCCACCCCTATTGCCATGCCCG GTCATGAAGCGATTTTGGCGGCAGTAAAGCCGGCGACAACCGAGTCGCTGTATTTTGTCGCTCGCGGTGATGGCAGCCAC TATTTTTCCAAGACCCTGGCGGAACATCGAAGAGCGGTGCGCGAATACCAATTACGACGCCGGGAAGGATACCGGTCTTC GCCGGGAGGAGGGCAATGA
Upstream 100 bases:
>100_bases CTGGCGCAATGGCATTGGCCGGTGTTGGCATCGGTCCGGGAACTGCAACAGTCGACAGAAACCTTTTTGGCCGGCTCACT GAAGGGCTAATAACCCCACT
Downstream 100 bases:
>100_bases GCGGTCGCTTTATTACCCTAGAAGGCGGAGAGGGTGCAGGTAAGAGTAGCAACCTCGTTTGGTTGGCAGAGGCGCTTCGG GCCGAGGGTAAGACGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRKKIRIFGLLVVLLIVAVPVAGAWVSSYLHRPLPISETFTVEVTKGAGLSRVLYNLKRDGILGEGVDARCRRVGARIYS AFTGMDGRMHMGEYQLKPGDSLLSLLEKMDRGDVLQRSLTLVEGWNFRELRARLAALETLEHRLKGLTDEQVMAKLGRPD LHPEGWFAPETYFYTRGTSDLTILARALERQERILDAAWQQRAKDLPLQTPYEALIMASIVERETGVPEERSEIAGVFTN RLNKGMRLQTDPTVIYGMGEAYNGNIRRSDLRRATPYNTYVIDGLPPTPIAMPGHEAILAAVKPATTESLYFVARGDGSH YFSKTLAEHRRAVREYQLRRREGYRSSPGGGQ
Sequences:
>Translated_352_residues MRKKIRIFGLLVVLLIVAVPVAGAWVSSYLHRPLPISETFTVEVTKGAGLSRVLYNLKRDGILGEGVDARCRRVGARIYS AFTGMDGRMHMGEYQLKPGDSLLSLLEKMDRGDVLQRSLTLVEGWNFRELRARLAALETLEHRLKGLTDEQVMAKLGRPD LHPEGWFAPETYFYTRGTSDLTILARALERQERILDAAWQQRAKDLPLQTPYEALIMASIVERETGVPEERSEIAGVFTN RLNKGMRLQTDPTVIYGMGEAYNGNIRRSDLRRATPYNTYVIDGLPPTPIAMPGHEAILAAVKPATTESLYFVARGDGSH YFSKTLAEHRRAVREYQLRRREGYRSSPGGGQ >Mature_352_residues MRKKIRIFGLLVVLLIVAVPVAGAWVSSYLHRPLPISETFTVEVTKGAGLSRVLYNLKRDGILGEGVDARCRRVGARIYS AFTGMDGRMHMGEYQLKPGDSLLSLLEKMDRGDVLQRSLTLVEGWNFRELRARLAALETLEHRLKGLTDEQVMAKLGRPD LHPEGWFAPETYFYTRGTSDLTILARALERQERILDAAWQQRAKDLPLQTPYEALIMASIVERETGVPEERSEIAGVFTN RLNKGMRLQTDPTVIYGMGEAYNGNIRRSDLRRATPYNTYVIDGLPPTPIAMPGHEAILAAVKPATTESLYFVARGDGSH YFSKTLAEHRRAVREYQLRRREGYRSSPGGGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=248, Percent_Identity=44.3548387096774, Blast_Score=206, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39589; Mature: 39589
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKIRIFGLLVVLLIVAVPVAGAWVSSYLHRPLPISETFTVEVTKGAGLSRVLYNLKRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHC GILGEGVDARCRRVGARIYSAFTGMDGRMHMGEYQLKPGDSLLSLLEKMDRGDVLQRSLT CCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCEECCCCHHHHHHHHHCCCCHHHHHHHH LVEGWNFRELRARLAALETLEHRLKGLTDEQVMAKLGRPDLHPEGWFAPETYFYTRGTSD HHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCH LTILARALERQERILDAAWQQRAKDLPLQTPYEALIMASIVERETGVPEERSEIAGVFTN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RLNKGMRLQTDPTVIYGMGEAYNGNIRRSDLRRATPYNTYVIDGLPPTPIAMPGHEAILA HHCCCCEEECCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH AVKPATTESLYFVARGDGSHYFSKTLAEHRRAVREYQLRRREGYRSSPGGGQ HCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRKKIRIFGLLVVLLIVAVPVAGAWVSSYLHRPLPISETFTVEVTKGAGLSRVLYNLKRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHC GILGEGVDARCRRVGARIYSAFTGMDGRMHMGEYQLKPGDSLLSLLEKMDRGDVLQRSLT CCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCEECCCCHHHHHHHHHCCCCHHHHHHHH LVEGWNFRELRARLAALETLEHRLKGLTDEQVMAKLGRPDLHPEGWFAPETYFYTRGTSD HHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCH LTILARALERQERILDAAWQQRAKDLPLQTPYEALIMASIVERETGVPEERSEIAGVFTN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RLNKGMRLQTDPTVIYGMGEAYNGNIRRSDLRRATPYNTYVIDGLPPTPIAMPGHEAILA HHCCCCEEECCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH AVKPATTESLYFVARGDGSHYFSKTLAEHRRAVREYQLRRREGYRSSPGGGQ HCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]