| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is murB
Identifier: 110833920
GI number: 110833920
Start: 1200216
End: 1201259
Strand: Direct
Name: murB
Synonym: ABO_1059
Alternate gene names: 110833920
Gene position: 1200216-1201259 (Clockwise)
Preceding gene: 110833919
Following gene: 110833922
Centisome position: 38.47
GC content: 54.12
Gene sequence:
>1044_bases GTGAGCGAGTCGGTACCACCAACCCACACTTTCACACAGATTGATGATGCGGATTTGACGGGGCTGAACACCCTAGGCCT GCCGGCCCGGGCTCAACGTTTAGCTCGTCCGACTACTTTGGATGCGTTGTCTCAGGTCTTGGCAGAGCGAAATCCCGCTG AGCCGCTTTTTGTGATCGGCGAAGGCAGTAATTTGGTGATTTGCTCTGATCTGCCGGGCTTGACGTTAAGCTTAGCAATC GATGGCATGTCCCTGGTTAAGCAAGATAATACGCATGTGTGGGTCGCTGCGGGCGCGGGTGTGCATTGGGATGATTTGGT GGCCTGGACCGTGGAGCAGGGTTGGCAGGGGTTGGAAAACTTATCTCTGATTCCCGGCACGGTAGGGGCTGCGCCTTTTC AGAATATTGGCGCCTATGGTGTAGAGCTGTCACAGTTGCTTGAGCAGGTGACGGTGATGGATGTGGTTACCGCTCAAGTA ACGCACTTTGCTGGCAATGAATGTGAATTTGCTTATCGCGATAGCCGTTTCAAAAGCCGAGACCGTGGCCGTTATATCAT TACCGGCATTGAGCTGCGTCTGAATAAAATGCCGCAGTGTAATGTGAGTTACGGGCCGCTTAAGGCCCGCTTTGGGCACT TGTCGCAAGCAGATATTCTCCCCGCCGCGGTTCGCGAGCATGTGATTGCGGTGCGCCAGAGTAAGCTGCCGGCTCCTGAT GTGTTGGCTAACGCAGGGAGTTTTTTTAAAAACCCGGTGGTAACAAAAGAGCGGGGGGATGCGTTAAAGAGGCGCTTTGC GGATTTGGTGGCGTATACGCAACCGGATGGTGTGAAGCTGGCAGCAGGATGGTTAATCGAGCAGGCCGGCTGGAAGGGAA AACGGTTGGGACCAGTTGGTATGCATAGCGAGCAAGCGCTGGTGTTGGTCAATCACGGTAATGCTACCAGTGCGGATGTC ATTGCGTTGGCAGAGGCTGTGTGTGCTGATGTGCAGGAGAAATTTGGTGTTGCGCTAGAACAGGAGCCAGTGTTGTTGCC ATAG
Upstream 100 bases:
>100_bases TGCCCGATCCTTATTATGGCGGCGAAGACGGTTTCGACACGGTGTTGGACTTGATTGAAGAGGGTGCCGATGGATTGTTG CGCCGTGTGCGGGAGCAGCT
Downstream 100 bases:
>100_bases AGGCATGGCGGTGGTTAATTCCAGCATATTATAGCTGGAGCAAAGAATGGACCCACAAAAAAGCCCGCTATAAAGCGGGC TTTTTTGTGGGTGGGATTTC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSESVPPTHTFTQIDDADLTGLNTLGLPARAQRLARPTTLDALSQVLAERNPAEPLFVIGEGSNLVICSDLPGLTLSLAI DGMSLVKQDNTHVWVAAGAGVHWDDLVAWTVEQGWQGLENLSLIPGTVGAAPFQNIGAYGVELSQLLEQVTVMDVVTAQV THFAGNECEFAYRDSRFKSRDRGRYIITGIELRLNKMPQCNVSYGPLKARFGHLSQADILPAAVREHVIAVRQSKLPAPD VLANAGSFFKNPVVTKERGDALKRRFADLVAYTQPDGVKLAAGWLIEQAGWKGKRLGPVGMHSEQALVLVNHGNATSADV IALAEAVCADVQEKFGVALEQEPVLLP
Sequences:
>Translated_347_residues MSESVPPTHTFTQIDDADLTGLNTLGLPARAQRLARPTTLDALSQVLAERNPAEPLFVIGEGSNLVICSDLPGLTLSLAI DGMSLVKQDNTHVWVAAGAGVHWDDLVAWTVEQGWQGLENLSLIPGTVGAAPFQNIGAYGVELSQLLEQVTVMDVVTAQV THFAGNECEFAYRDSRFKSRDRGRYIITGIELRLNKMPQCNVSYGPLKARFGHLSQADILPAAVREHVIAVRQSKLPAPD VLANAGSFFKNPVVTKERGDALKRRFADLVAYTQPDGVKLAAGWLIEQAGWKGKRLGPVGMHSEQALVLVNHGNATSADV IALAEAVCADVQEKFGVALEQEPVLLP >Mature_346_residues SESVPPTHTFTQIDDADLTGLNTLGLPARAQRLARPTTLDALSQVLAERNPAEPLFVIGEGSNLVICSDLPGLTLSLAID GMSLVKQDNTHVWVAAGAGVHWDDLVAWTVEQGWQGLENLSLIPGTVGAAPFQNIGAYGVELSQLLEQVTVMDVVTAQVT HFAGNECEFAYRDSRFKSRDRGRYIITGIELRLNKMPQCNVSYGPLKARFGHLSQADILPAAVREHVIAVRQSKLPAPDV LANAGSFFKNPVVTKERGDALKRRFADLVAYTQPDGVKLAAGWLIEQAGWKGKRLGPVGMHSEQALVLVNHGNATSADVI ALAEAVCADVQEKFGVALEQEPVLLP
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=333, Percent_Identity=41.4414414414414, Blast_Score=227, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_ALCBS (Q0VQP1)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692779.1 - ProteinModelPortal: Q0VQP1 - SMR: Q0VQP1 - STRING: Q0VQP1 - GeneID: 4211240 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_1059 - NMPDR: fig|393595.12.peg.1067 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: GAAPMQN - PhylomeDB: Q0VQP1 - BioCyc: ABOR393595:ABO_1059-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 37370; Mature: 37239
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 173-173 ACT_SITE 247-247 ACT_SITE 342-342
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESVPPTHTFTQIDDADLTGLNTLGLPARAQRLARPTTLDALSQVLAERNPAEPLFVIG CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE EGSNLVICSDLPGLTLSLAIDGMSLVKQDNTHVWVAAGAGVHWDDLVAWTVEQGWQGLEN CCCCEEEECCCCCCEEEEEECCHHHHCCCCCEEEEEECCCCCHHHHHEEEHHHHCCCCCC LSLIPGTVGAAPFQNIGAYGVELSQLLEQVTVMDVVTAQVTHFAGNECEFAYRDSRFKSR CEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC DRGRYIITGIELRLNKMPQCNVSYGPLKARFGHLSQADILPAAVREHVIAVRQSKLPAPD CCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH VLANAGSFFKNPVVTKERGDALKRRFADLVAYTQPDGVKLAAGWLIEQAGWKGKRLGPVG HHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCCCCC MHSEQALVLVNHGNATSADVIALAEAVCADVQEKFGVALEQEPVLLP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC >Mature Secondary Structure SESVPPTHTFTQIDDADLTGLNTLGLPARAQRLARPTTLDALSQVLAERNPAEPLFVIG CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE EGSNLVICSDLPGLTLSLAIDGMSLVKQDNTHVWVAAGAGVHWDDLVAWTVEQGWQGLEN CCCCEEEECCCCCCEEEEEECCHHHHCCCCCEEEEEECCCCCHHHHHEEEHHHHCCCCCC LSLIPGTVGAAPFQNIGAYGVELSQLLEQVTVMDVVTAQVTHFAGNECEFAYRDSRFKSR CEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC DRGRYIITGIELRLNKMPQCNVSYGPLKARFGHLSQADILPAAVREHVIAVRQSKLPAPD CCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH VLANAGSFFKNPVVTKERGDALKRRFADLVAYTQPDGVKLAAGWLIEQAGWKGKRLGPVG HHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCCCCC MHSEQALVLVNHGNATSADVIALAEAVCADVQEKFGVALEQEPVLLP CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA