Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is nqrC [H]

Identifier: 110833895

GI number: 110833895

Start: 1175497

End: 1176318

Strand: Direct

Name: nqrC [H]

Synonym: ABO_1034

Alternate gene names: 110833895

Gene position: 1175497-1176318 (Clockwise)

Preceding gene: 110833894

Following gene: 110833896

Centisome position: 37.67

GC content: 53.53

Gene sequence:

>822_bases
ATGGCTGGAAACAACGAAAGCGTTGGTAAAACGCTGCTGGTCGCCTTCCTGGTATGCGTGGTTTGTGGTGTGGTTGTGGC
CACAGCAGCGGTGAGCTTGCGTCCGGTTCAGGCTGAGAATCAGCTTCTCGATAAACGGATGAATATTCTTCAAGCCGCTG
GGTTGTACCAAGAAGGTACCGACGTAGAAGAGGTTTTCAAGACTATTGAGCGTAAGTTTGTTGATATCGATACCGGCAAA
TATGTTGAGATGCCAGAGTCTTACGATCAACGTAAAGCGGCTAAGGATCCCGAGCAATCTATTCGCCTGACTGGCGATGA
AGACCTTGCGGACATCAAGAGCCAGGCAAAAGTGGCCGAAGTGTACCTGGCCAAAGACGATAGCGGCGCGCTAAGCCGTA
TCATCTTGCCCGTTCATGGCTACGGCCTTTGGTCTACTCTGTACGGTTTCCTGGCGCTTGAGCCGGATGCCAATACAGTG
GCCGGGCTCGGTTTCTACGAGCACGGCGAAACTCCAGGGCTGGGGGGTGAAGTGGATAACCCTAAGTGGAAGGCTCTTTG
GGAAGGCAAGAAGTTATACGGTGACCAGGGGGAAGTGGAAATCCAGGTGATTAAAGGCACAGTGGATGGCAGCACCCCGA
ATGCGGAATACAAAGTTGATGGCCTGGCCGGCGCAACCCTGACCAGCAAGGGTGTAAGTAACTTGCTGCGTTTTTGGGTA
GGCGAAAACGGTTTTGGTCCTTACCTTGAGCGTATGCAAGAGGGTGAAACGGCGGTGGCTGATGGTGCCGCGACACCTGA
GCAACCGGAAGGAGAGGCGTAA

Upstream 100 bases:

>100_bases
TGGCGATCCTGTTCGGCAACTTGTGTGCACCGCTGATTGATTACTTTGTGACCCAGGCGAATATTCGTCGCCGCCTGCGT
CGGACAGGGGGAGAAGTCTA

Downstream 100 bases:

>100_bases
TGGCGGAGAAAACCAAGGACATCTTGTTAGGTCCGATTTTCGACAATAACCCCATCGCTCTGCAGATCCTGGGTATCTGT
TCCGCGTTGGCGGTGACCAG

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGK
YVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTV
AGLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV
GENGFGPYLERMQEGETAVADGAATPEQPEGEA

Sequences:

>Translated_273_residues
MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGK
YVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTV
AGLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV
GENGFGPYLERMQEGETAVADGAATPEQPEGEA
>Mature_272_residues
AGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGKY
VEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVA
GLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWVG
ENGFGPYLERMQEGETAVADGAATPEQPEGEA

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 29377; Mature: 29246

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DVEEVFKTIERKFVDIDTGKYVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAE
CHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHCCCHHHCEEECCCHHHHHHHHHHHEEE
VYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVAGLGFYEHGETPGLGGEVDN
EEEECCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCCCEEECCCHHCCCCCCCCCCCCC
PKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV
CCEEEEECCHHHCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
GENGFGPYLERMQEGETAVADGAATPEQPEGEA
CCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DVEEVFKTIERKFVDIDTGKYVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAE
CHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHCCCHHHCEEECCCHHHHHHHHHHHEEE
VYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVAGLGFYEHGETPGLGGEVDN
EEEECCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCCCEEECCCHHCCCCCCCCCCCCC
PKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV
CCEEEEECCHHHCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
GENGFGPYLERMQEGETAVADGAATPEQPEGEA
CCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]