| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is nqrC [H]
Identifier: 110833895
GI number: 110833895
Start: 1175497
End: 1176318
Strand: Direct
Name: nqrC [H]
Synonym: ABO_1034
Alternate gene names: 110833895
Gene position: 1175497-1176318 (Clockwise)
Preceding gene: 110833894
Following gene: 110833896
Centisome position: 37.67
GC content: 53.53
Gene sequence:
>822_bases ATGGCTGGAAACAACGAAAGCGTTGGTAAAACGCTGCTGGTCGCCTTCCTGGTATGCGTGGTTTGTGGTGTGGTTGTGGC CACAGCAGCGGTGAGCTTGCGTCCGGTTCAGGCTGAGAATCAGCTTCTCGATAAACGGATGAATATTCTTCAAGCCGCTG GGTTGTACCAAGAAGGTACCGACGTAGAAGAGGTTTTCAAGACTATTGAGCGTAAGTTTGTTGATATCGATACCGGCAAA TATGTTGAGATGCCAGAGTCTTACGATCAACGTAAAGCGGCTAAGGATCCCGAGCAATCTATTCGCCTGACTGGCGATGA AGACCTTGCGGACATCAAGAGCCAGGCAAAAGTGGCCGAAGTGTACCTGGCCAAAGACGATAGCGGCGCGCTAAGCCGTA TCATCTTGCCCGTTCATGGCTACGGCCTTTGGTCTACTCTGTACGGTTTCCTGGCGCTTGAGCCGGATGCCAATACAGTG GCCGGGCTCGGTTTCTACGAGCACGGCGAAACTCCAGGGCTGGGGGGTGAAGTGGATAACCCTAAGTGGAAGGCTCTTTG GGAAGGCAAGAAGTTATACGGTGACCAGGGGGAAGTGGAAATCCAGGTGATTAAAGGCACAGTGGATGGCAGCACCCCGA ATGCGGAATACAAAGTTGATGGCCTGGCCGGCGCAACCCTGACCAGCAAGGGTGTAAGTAACTTGCTGCGTTTTTGGGTA GGCGAAAACGGTTTTGGTCCTTACCTTGAGCGTATGCAAGAGGGTGAAACGGCGGTGGCTGATGGTGCCGCGACACCTGA GCAACCGGAAGGAGAGGCGTAA
Upstream 100 bases:
>100_bases TGGCGATCCTGTTCGGCAACTTGTGTGCACCGCTGATTGATTACTTTGTGACCCAGGCGAATATTCGTCGCCGCCTGCGT CGGACAGGGGGAGAAGTCTA
Downstream 100 bases:
>100_bases TGGCGGAGAAAACCAAGGACATCTTGTTAGGTCCGATTTTCGACAATAACCCCATCGCTCTGCAGATCCTGGGTATCTGT TCCGCGTTGGCGGTGACCAG
Product: Na(+)-translocating NADH-quinone reductase subunit C
Products: NA
Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGK YVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTV AGLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV GENGFGPYLERMQEGETAVADGAATPEQPEGEA
Sequences:
>Translated_273_residues MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGK YVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTV AGLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV GENGFGPYLERMQEGETAVADGAATPEQPEGEA >Mature_272_residues AGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGTDVEEVFKTIERKFVDIDTGKY VEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAEVYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVA GLGFYEHGETPGLGGEVDNPKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWVG ENGFGPYLERMQEGETAVADGAATPEQPEGEA
Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui
COG id: COG2869
COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nqrC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007329 - InterPro: IPR010204 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 29377; Mature: 29246
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC DVEEVFKTIERKFVDIDTGKYVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAE CHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHCCCHHHCEEECCCHHHHHHHHHHHEEE VYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVAGLGFYEHGETPGLGGEVDN EEEECCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCCCEEECCCHHCCCCCCCCCCCCC PKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV CCEEEEECCHHHCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH GENGFGPYLERMQEGETAVADGAATPEQPEGEA CCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure AGNNESVGKTLLVAFLVCVVCGVVVATAAVSLRPVQAENQLLDKRMNILQAAGLYQEGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC DVEEVFKTIERKFVDIDTGKYVEMPESYDQRKAAKDPEQSIRLTGDEDLADIKSQAKVAE CHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHCCCHHHCEEECCCHHHHHHHHHHHEEE VYLAKDDSGALSRIILPVHGYGLWSTLYGFLALEPDANTVAGLGFYEHGETPGLGGEVDN EEEECCCCCCCEEEEEECCCCHHHHHHHHHEEECCCCCCEEECCCHHCCCCCCCCCCCCC PKWKALWEGKKLYGDQGEVEIQVIKGTVDGSTPNAEYKVDGLAGATLTSKGVSNLLRFWV CCEEEEECCHHHCCCCCCEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH GENGFGPYLERMQEGETAVADGAATPEQPEGEA CCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]