| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is wzx
Identifier: 110833776
GI number: 110833776
Start: 1022470
End: 1023798
Strand: Direct
Name: wzx
Synonym: ABO_0915
Alternate gene names: NA
Gene position: 1022470-1023798 (Clockwise)
Preceding gene: 110833775
Following gene: 110833777
Centisome position: 32.77
GC content: 49.51
Gene sequence:
>1329_bases TTGAATAATTGGCGCACTCGTCTCGCAGAGATTAAGCAGGGGCAGGGACTTAAAGCGCAATTAGTGCGAGGTGTGCTTGG GGTCGGCGGCCTGAAGTTGCTGTCGATGCCGCTAACCCTTGGAGCATCGGTGCTTCTGGCAAGAGGGTTGGGGCCTGAAG GTTATGGTCAATACGTGTTTGTTCTGTCCCTCATAACCATGTTGGCACTTCCAGTAGGGCCTGGAATTGGGCAGCTTATT ACACGAGAGGTCGCCAAATACCAATATTCAGAGCAATGGTCTTTCTTCCGGGGGGTATTACGTCGTTCGAATCAGTGGGT TGTGCTTGCCGCAACATTATTCCTAGTCGTTGTCGTATCGGCCGCAAGTTGGAATGCCAAATGGGAAGTAAATGATCGTT GGGCGCTGTTACTGATCGCTAGCTTTCTTGTGCCTCTGCTTGGTTTAAATACTGTCAGGTCAAATACCTTGCAGGGATTG CGTCACGTAGTTCTTGCACAGTTGCCCGATTTGTTGCTTAGGCCTGCTACACATCTCGTAGTAGCTGCTATGTTGATGTT TTCAGGATTGCTCAATCCGGCAACAGCTTTGGGCGCTCAAATAGCGGGTACGGGAGTGGCCTTTTTGGTAGGGGCTCTGT TCCTCCAGCTAAAAATTCCTGGCCAAGTACGCTTAAGTGCTCCCAAATATCGGACCGCAGAATGGGGAAAGGCAATAATG CCGTTTACCTTGCTTGCAGCAGTTGGGACTCTCAATAGCCAGATAGGCATTCTCTTTCTTGGTTGGCTCGGCCGGCCAGA GGATGTGGCTGCTTTGCAGATTGGTATGAGTGGGTCGGCATTGGTGGTTTTTGTTCTGGCTCTAATAAATCTTGTTATCA GTCCTCATATCATCAAAGCCAGGCAAGAAGGCGATAAAAATAAGCTGCAAATGCTGTCCCGGTATTCCTCCCGCGCGGCG CTATTTGGCGCGTTGCCTATAGGTCTGCCACTAATTTTTGTCGGAGATGCAATTGTTCATTACTTATACGGTGATGAATA CATCAATTCTGCCGTGTTGCCGCTGGCGATATTAACTGCTGGGCAGCTCTTTAACGTGGCATGTGGTTCTGTAGGTCAGT TCCTGACCATGAGTGGCTATGAGAAGGATACACTGCTTGGACAAGTGGTTGCGTTGATGGCTAGCGTCGCATTGGCAGTA ATTCTAATTCCTGATTTTGGCGCCGTGGGTGCCGCTAGTGCGGTAACAGCTGGCCTGGTGATATGGAATTTAGTGCTGGC TTGGCTTTTCAAGAAGAGACTGGGCTTTATGCCAACAGTTTTAGGTTGA
Upstream 100 bases:
>100_bases AAATTGGGATTGACTGGCCATTTGAACCAGAAGCGCGATCGCCCCTCGTATCGCAAAAGGATGCGGCAGGCGCACGGCTG CTGGATGCAGAGGTATACGA
Downstream 100 bases:
>100_bases AGATATGATTATAGATGACAAGCATGAGATCGCTTTTGTCCACATTCCCAAATGTGCCGGGACAACTGTGCGGGAATACT TAAAGGAATATGATCGATCA
Product: polysaccharide export protein, translocase
Products: NA
Alternate protein names: Polysaccharide Biosynthesis-Like Protein; Polysaccharide Export Protein Translocase; MATE Domain Family Protein; MatE Family; Cell Surface Polysaccharide Transporter; Exopolysaccharide Biosynthesis Protein; Multidrug/Oligosaccharidyl-Lipid/Polysaccharide Transporter
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MNNWRTRLAEIKQGQGLKAQLVRGVLGVGGLKLLSMPLTLGASVLLARGLGPEGYGQYVFVLSLITMLALPVGPGIGQLI TREVAKYQYSEQWSFFRGVLRRSNQWVVLAATLFLVVVVSAASWNAKWEVNDRWALLLIASFLVPLLGLNTVRSNTLQGL RHVVLAQLPDLLLRPATHLVVAAMLMFSGLLNPATALGAQIAGTGVAFLVGALFLQLKIPGQVRLSAPKYRTAEWGKAIM PFTLLAAVGTLNSQIGILFLGWLGRPEDVAALQIGMSGSALVVFVLALINLVISPHIIKARQEGDKNKLQMLSRYSSRAA LFGALPIGLPLIFVGDAIVHYLYGDEYINSAVLPLAILTAGQLFNVACGSVGQFLTMSGYEKDTLLGQVVALMASVALAV ILIPDFGAVGAASAVTAGLVIWNLVLAWLFKKRLGFMPTVLG
Sequences:
>Translated_442_residues MNNWRTRLAEIKQGQGLKAQLVRGVLGVGGLKLLSMPLTLGASVLLARGLGPEGYGQYVFVLSLITMLALPVGPGIGQLI TREVAKYQYSEQWSFFRGVLRRSNQWVVLAATLFLVVVVSAASWNAKWEVNDRWALLLIASFLVPLLGLNTVRSNTLQGL RHVVLAQLPDLLLRPATHLVVAAMLMFSGLLNPATALGAQIAGTGVAFLVGALFLQLKIPGQVRLSAPKYRTAEWGKAIM PFTLLAAVGTLNSQIGILFLGWLGRPEDVAALQIGMSGSALVVFVLALINLVISPHIIKARQEGDKNKLQMLSRYSSRAA LFGALPIGLPLIFVGDAIVHYLYGDEYINSAVLPLAILTAGQLFNVACGSVGQFLTMSGYEKDTLLGQVVALMASVALAV ILIPDFGAVGAASAVTAGLVIWNLVLAWLFKKRLGFMPTVLG >Mature_442_residues MNNWRTRLAEIKQGQGLKAQLVRGVLGVGGLKLLSMPLTLGASVLLARGLGPEGYGQYVFVLSLITMLALPVGPGIGQLI TREVAKYQYSEQWSFFRGVLRRSNQWVVLAATLFLVVVVSAASWNAKWEVNDRWALLLIASFLVPLLGLNTVRSNTLQGL RHVVLAQLPDLLLRPATHLVVAAMLMFSGLLNPATALGAQIAGTGVAFLVGALFLQLKIPGQVRLSAPKYRTAEWGKAIM PFTLLAAVGTLNSQIGILFLGWLGRPEDVAALQIGMSGSALVVFVLALINLVISPHIIKARQEGDKNKLQMLSRYSSRAA LFGALPIGLPLIFVGDAIVHYLYGDEYINSAVLPLAILTAGQLFNVACGSVGQFLTMSGYEKDTLLGQVVALMASVALAV ILIPDFGAVGAASAVTAGLVIWNLVLAWLFKKRLGFMPTVLG
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47244; Mature: 47244
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNWRTRLAEIKQGQGLKAQLVRGVLGVGGLKLLSMPLTLGASVLLARGLGPEGYGQYVF CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VLSLITMLALPVGPGIGQLITREVAKYQYSEQWSFFRGVLRRSNQWVVLAATLFLVVVVS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH AASWNAKWEVNDRWALLLIASFLVPLLGLNTVRSNTLQGLRHVVLAQLPDLLLRPATHLV HCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VAAMLMFSGLLNPATALGAQIAGTGVAFLVGALFLQLKIPGQVRLSAPKYRTAEWGKAIM HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCEEECCCCCCCHHHCCHHH PFTLLAAVGTLNSQIGILFLGWLGRPEDVAALQIGMSGSALVVFVLALINLVISPHIIKA HHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH RQEGDKNKLQMLSRYSSRAALFGALPIGLPLIFVGDAIVHYLYGDEYINSAVLPLAILTA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GQLFNVACGSVGQFLTMSGYEKDTLLGQVVALMASVALAVILIPDFGAVGAASAVTAGLV HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH IWNLVLAWLFKKRLGFMPTVLG HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNNWRTRLAEIKQGQGLKAQLVRGVLGVGGLKLLSMPLTLGASVLLARGLGPEGYGQYVF CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VLSLITMLALPVGPGIGQLITREVAKYQYSEQWSFFRGVLRRSNQWVVLAATLFLVVVVS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH AASWNAKWEVNDRWALLLIASFLVPLLGLNTVRSNTLQGLRHVVLAQLPDLLLRPATHLV HCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VAAMLMFSGLLNPATALGAQIAGTGVAFLVGALFLQLKIPGQVRLSAPKYRTAEWGKAIM HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCEEECCCCCCCHHHCCHHH PFTLLAAVGTLNSQIGILFLGWLGRPEDVAALQIGMSGSALVVFVLALINLVISPHIIKA HHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH RQEGDKNKLQMLSRYSSRAALFGALPIGLPLIFVGDAIVHYLYGDEYINSAVLPLAILTA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GQLFNVACGSVGQFLTMSGYEKDTLLGQVVALMASVALAVILIPDFGAVGAASAVTAGLV HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH IWNLVLAWLFKKRLGFMPTVLG HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA