Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833752

Identifier: 110833752

GI number: 110833752

Start: 988481

End: 991261

Strand: Direct

Name: 110833752

Synonym: ABO_0891

Alternate gene names: NA

Gene position: 988481-991261 (Clockwise)

Preceding gene: 110833751

Following gene: 110833753

Centisome position: 31.68

GC content: 55.77

Gene sequence:

>2781_bases
ATGAAGTTCCGTCTGTTGCTTATGGTTGTTCTTGCTTCGGTATTGGCCGGCGCATGGACAGCCCATGCGGCGGATCCAGA
ACCCTATGTGGAACGCTATTACGATCGCAGCTATCGGGTGTTTATGGCGTCGGGAAATTTACCCCGTGCCCGGCAAGTGA
TTGAAAATGCGCTCTACTGGCGTTCCGACGATGAGCGCTGGTGGCGTCGTTTGGCTGAAGTATCCCGTTGGTTGGGCGAC
CCGGAAACCGCATTGAAGGCCTGGCGTCAGGTGGCGGAGTTGAGTAATGACCCGCAGGCGTGGAAGCACGTACTGGAGTT
AGCGCCACTGACCTATAACAACCGCCTTGCCCTGCGGGCTCACAAGGCGCTATTGAGCGTGTCCCCTTACGATGCGGGCA
TCATTGCCACCATCGGTCGGCAATACGAGTTGTTGGGTCAGCCTGAGGCAGGGCTGCGCTTCTTCGAACAGTGGCGTCGT
AGTTATCCCAGCAAAGCGGTGCTAAGAGAAATGCAACGCTTGGCTCTGAACCAGGGAGAAGATTTGCTGGCGGCAGGTTA
TTCCCGGGAATACATGGATCGTTTTGGTCCTGAGCCGTTGATGGCAGAACAGGCCGCAGATCTGTACTGGCTAAATGGTC
AACGCGAAAAAGCGCTGTTAGACCTAAATCGTGATGCTAACCAGTTGCCTTATATACCCGCATTGTCCCGTCGTATTGCG
GTGATGGCCGGGGAGTTGGGGGAGTGGGATCTGGCACTGTCCCGTTACCAGGAGCTGGTGGACAATGAAGACGATCAGAT
AGACGACCTGTATAACTATATAACGCTGTCCCGTTATTACCAGCCGGAGCGGCTAGCATTGCTGATGGGCCGGGCCTGGC
GCAAGAACGGTGACCCGCAATTGGCACTTGGCGCATTGTACCAGCTGCAGTCTCGCGGCGATGATGCCGCCATTGATGCC
TTTCTTAAGGGGCTGAGCGCGGAACAACGACAACGGCTTGAACAAACCCCGGAATTTTTGCGCTTCTATGCCAACCTGCA
ATTGCATCGCGGGGATGCAGACGCGGCGCAGCGGTGGCTTAATAAAGCCTTGGTTTTAAATTCCGAGGACAGAGAAACCC
GCATTAGCTGGATGTGGCTGCTCATCGCCACAGGCCAAGATACCGCGCTGCAACAGGCTCTGGTGAATTGGGAAGACTCG
GCTCGCAGTGACCGCCGCTATTGGAACGTGCTGGCAGCTTCACAAATGGCCTTGGGTAATGCGGAGCAGTCCCTGCGCTA
TGAAATTGAACTACTGAAAACTGCCCGCGATAACTGGGAGAGGCAGTGGTATTACTCCCAGGCGTTGATTGCTTCTGGGC
GAAACGGGCAAGCTTGGCCGGTAATGCGTCGCCTAAAAGAGCAGCTTCCGTTTACGGTCGAACCGCAGCAACAGGCCACC
TATAGGGACATGAAGTTGACCCTAAGCCTGTTATTTGATGATGGCGACACCACCCTCAAACTGGCCCAAGCGCAAATAGA
CGGCATGGAAGACGTGCCCGCCGCTCATGCTGAATGGCTAGCGCAGTGGGCCATTGGTCAGTCGGAACCTGGCTTGGCTC
AGAGCTGGTATTTACGTAAAAAAATAGCACAGCAGGGCCCGCTTAAGGCTGGATCAGCGCTGGCCTATGCCTTGGTGCAG
GGTGATCTGGATTCGGTAGCCAGAACGCGTGAGCAGTACTTGGGCCAGCTTAGCCTGTCCGAACAGCTGGAAGCCCACGT
GCGGTTGGATGAACCGCGCCAGGCCGCTAATACTTTCATGGCCATTCAGGCCGGAGCGCCAGAGTTGGCAGGCAGTAATA
ATCTGCAGGAAAGCCTGCTGTTGCCTACGGCGCTTTCCTCCCAGTTTCATCTTGAGCAGCGCCGTTTGGGTGCGCTGGAT
ATTCAGGACCTGCAGTTTGTTCAGTACCACCCGATCAGTGACTTCACGCAGTTGTCGGTGGAGGCTCGTCAGCGCAATTT
CAGTAGTAATGACGATGAATTATTGCAGATCAGTGATGATGAGCAGCGCCTCTCGGTGGCGTTAGCCTACCAGCGCGAAC
GGTTCCGCAGTCGCCTGAAATTGGGCCAGCGCAATCTGTTGAACAATAGTGAAACCATGGCGGACTTGGAGCTGGGGGCG
AACTGGACGCAGTATTGGTCCGGTAGCCTGAATTACCAATGGCGAACGCCGGCGGATGAATCGTCCCTGTTGATTCTCGG
TGCGTCACGCACGGGTAGCCAGTGGTTGTTGAATTGGAGGCCATCATCCACCTGGCAAAGCAGTGTGGATTGGGCCAACT
ATGACTACCATGATCTCAATGAGAGCGATCTGGGCAGTGGCAGTATCATCAATGCTCAAAGCACCTGGCGCCCCTGGTTA
TCACGCTTTTCCCCCGGCGTACGGGTGAGGCACACCCGTGCGGACTTCACCGCTGGCGGCGACAGCATGGCGCAAGTGCG
TGCGCTGCTACCCCCGGGGGCCCAGACGTTGCCGCTACCGCAAGACTATCACGAGTCGGAAATAGTACTGTTGTTGGGCC
AGCCTGATGTCCATATTCGTGCGCACCGATTACAGGGTTGGGGAGAAATTGGCTACAGCGAGAACAGTTTGTCTGGGGCG
GGTTTTACCGGCCGCTTCGGGGTCGAAGGCCCTTTGATCGGGCGTGATGAATGGAAGATTTACGCGGAGCAACAGCTCAA
TAGCGGTGGCAGTGATGAAGACAGCTACCGCTTTGGGCTGCAATATAGAATTTATTATTAG

Upstream 100 bases:

>100_bases
TGTACCGGTTAATGACCTTGGCTCAGGCTGGCGGCAATATGGCAGCGGCAGAACATTATGCGGTGTTGCTGTTAAGGCTG
GCGGATATCGAGGAGCCCGG

Downstream 100 bases:

>100_bases
GAGTGAATCCAATGAGAGTGAGCATTCCGCTACTGGGTACCTTGCTGCTGGCTGTCGTGCTGGCCGGTTGTACTCATGTT
CGCAGCAGTCAGAATGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein TPR Domain-Containing; TPR Repeat Containing Protein; Signal Peptide Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 926; Mature: 926

Protein sequence:

>926_residues
MKFRLLLMVVLASVLAGAWTAHAADPEPYVERYYDRSYRVFMASGNLPRARQVIENALYWRSDDERWWRRLAEVSRWLGD
PETALKAWRQVAELSNDPQAWKHVLELAPLTYNNRLALRAHKALLSVSPYDAGIIATIGRQYELLGQPEAGLRFFEQWRR
SYPSKAVLREMQRLALNQGEDLLAAGYSREYMDRFGPEPLMAEQAADLYWLNGQREKALLDLNRDANQLPYIPALSRRIA
VMAGELGEWDLALSRYQELVDNEDDQIDDLYNYITLSRYYQPERLALLMGRAWRKNGDPQLALGALYQLQSRGDDAAIDA
FLKGLSAEQRQRLEQTPEFLRFYANLQLHRGDADAAQRWLNKALVLNSEDRETRISWMWLLIATGQDTALQQALVNWEDS
ARSDRRYWNVLAASQMALGNAEQSLRYEIELLKTARDNWERQWYYSQALIASGRNGQAWPVMRRLKEQLPFTVEPQQQAT
YRDMKLTLSLLFDDGDTTLKLAQAQIDGMEDVPAAHAEWLAQWAIGQSEPGLAQSWYLRKKIAQQGPLKAGSALAYALVQ
GDLDSVARTREQYLGQLSLSEQLEAHVRLDEPRQAANTFMAIQAGAPELAGSNNLQESLLLPTALSSQFHLEQRRLGALD
IQDLQFVQYHPISDFTQLSVEARQRNFSSNDDELLQISDDEQRLSVALAYQRERFRSRLKLGQRNLLNNSETMADLELGA
NWTQYWSGSLNYQWRTPADESSLLILGASRTGSQWLLNWRPSSTWQSSVDWANYDYHDLNESDLGSGSIINAQSTWRPWL
SRFSPGVRVRHTRADFTAGGDSMAQVRALLPPGAQTLPLPQDYHESEIVLLLGQPDVHIRAHRLQGWGEIGYSENSLSGA
GFTGRFGVEGPLIGRDEWKIYAEQQLNSGGSDEDSYRFGLQYRIYY

Sequences:

>Translated_926_residues
MKFRLLLMVVLASVLAGAWTAHAADPEPYVERYYDRSYRVFMASGNLPRARQVIENALYWRSDDERWWRRLAEVSRWLGD
PETALKAWRQVAELSNDPQAWKHVLELAPLTYNNRLALRAHKALLSVSPYDAGIIATIGRQYELLGQPEAGLRFFEQWRR
SYPSKAVLREMQRLALNQGEDLLAAGYSREYMDRFGPEPLMAEQAADLYWLNGQREKALLDLNRDANQLPYIPALSRRIA
VMAGELGEWDLALSRYQELVDNEDDQIDDLYNYITLSRYYQPERLALLMGRAWRKNGDPQLALGALYQLQSRGDDAAIDA
FLKGLSAEQRQRLEQTPEFLRFYANLQLHRGDADAAQRWLNKALVLNSEDRETRISWMWLLIATGQDTALQQALVNWEDS
ARSDRRYWNVLAASQMALGNAEQSLRYEIELLKTARDNWERQWYYSQALIASGRNGQAWPVMRRLKEQLPFTVEPQQQAT
YRDMKLTLSLLFDDGDTTLKLAQAQIDGMEDVPAAHAEWLAQWAIGQSEPGLAQSWYLRKKIAQQGPLKAGSALAYALVQ
GDLDSVARTREQYLGQLSLSEQLEAHVRLDEPRQAANTFMAIQAGAPELAGSNNLQESLLLPTALSSQFHLEQRRLGALD
IQDLQFVQYHPISDFTQLSVEARQRNFSSNDDELLQISDDEQRLSVALAYQRERFRSRLKLGQRNLLNNSETMADLELGA
NWTQYWSGSLNYQWRTPADESSLLILGASRTGSQWLLNWRPSSTWQSSVDWANYDYHDLNESDLGSGSIINAQSTWRPWL
SRFSPGVRVRHTRADFTAGGDSMAQVRALLPPGAQTLPLPQDYHESEIVLLLGQPDVHIRAHRLQGWGEIGYSENSLSGA
GFTGRFGVEGPLIGRDEWKIYAEQQLNSGGSDEDSYRFGLQYRIYY
>Mature_926_residues
MKFRLLLMVVLASVLAGAWTAHAADPEPYVERYYDRSYRVFMASGNLPRARQVIENALYWRSDDERWWRRLAEVSRWLGD
PETALKAWRQVAELSNDPQAWKHVLELAPLTYNNRLALRAHKALLSVSPYDAGIIATIGRQYELLGQPEAGLRFFEQWRR
SYPSKAVLREMQRLALNQGEDLLAAGYSREYMDRFGPEPLMAEQAADLYWLNGQREKALLDLNRDANQLPYIPALSRRIA
VMAGELGEWDLALSRYQELVDNEDDQIDDLYNYITLSRYYQPERLALLMGRAWRKNGDPQLALGALYQLQSRGDDAAIDA
FLKGLSAEQRQRLEQTPEFLRFYANLQLHRGDADAAQRWLNKALVLNSEDRETRISWMWLLIATGQDTALQQALVNWEDS
ARSDRRYWNVLAASQMALGNAEQSLRYEIELLKTARDNWERQWYYSQALIASGRNGQAWPVMRRLKEQLPFTVEPQQQAT
YRDMKLTLSLLFDDGDTTLKLAQAQIDGMEDVPAAHAEWLAQWAIGQSEPGLAQSWYLRKKIAQQGPLKAGSALAYALVQ
GDLDSVARTREQYLGQLSLSEQLEAHVRLDEPRQAANTFMAIQAGAPELAGSNNLQESLLLPTALSSQFHLEQRRLGALD
IQDLQFVQYHPISDFTQLSVEARQRNFSSNDDELLQISDDEQRLSVALAYQRERFRSRLKLGQRNLLNNSETMADLELGA
NWTQYWSGSLNYQWRTPADESSLLILGASRTGSQWLLNWRPSSTWQSSVDWANYDYHDLNESDLGSGSIINAQSTWRPWL
SRFSPGVRVRHTRADFTAGGDSMAQVRALLPPGAQTLPLPQDYHESEIVLLLGQPDVHIRAHRLQGWGEIGYSENSLSGA
GFTGRFGVEGPLIGRDEWKIYAEQQLNSGGSDEDSYRFGLQYRIYY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105846; Mature: 105846

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRLLLMVVLASVLAGAWTAHAADPEPYVERYYDRSYRVFMASGNLPRARQVIENALYW
CCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
RSDDERWWRRLAEVSRWLGDPETALKAWRQVAELSNDPQAWKHVLELAPLTYNNRLALRA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHEE
HKALLSVSPYDAGIIATIGRQYELLGQPEAGLRFFEQWRRSYPSKAVLREMQRLALNQGE
HHHHHCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLLAAGYSREYMDRFGPEPLMAEQAADLYWLNGQREKALLDLNRDANQLPYIPALSRRIA
HHHHCCCCHHHHHHCCCCCHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHH
VMAGELGEWDLALSRYQELVDNEDDQIDDLYNYITLSRYYQPERLALLMGRAWRKNGDPQ
HHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
LALGALYQLQSRGDDAAIDAFLKGLSAEQRQRLEQTPEFLRFYANLQLHRGDADAAQRWL
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCEEECCCHHHHHHHH
NKALVLNSEDRETRISWMWLLIATGQDTALQQALVNWEDSARSDRRYWNVLAASQMALGN
HHHEEECCCCCHHEEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AEQSLRYEIELLKTARDNWERQWYYSQALIASGRNGQAWPVMRRLKEQLPFTVEPQQQAT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCHHHH
YRDMKLTLSLLFDDGDTTLKLAQAQIDGMEDVPAAHAEWLAQWAIGQSEPGLAQSWYLRK
HHHHEEEEEEEEECCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
KIAQQGPLKAGSALAYALVQGDLDSVARTREQYLGQLSLSEQLEAHVRLDEPRQAANTFM
HHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHCEEE
AIQAGAPELAGSNNLQESLLLPTALSSQFHLEQRRLGALDIQDLQFVQYHPISDFTQLSV
EEECCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
EARQRNFSSNDDELLQISDDEQRLSVALAYQRERFRSRLKLGQRNLLNNSETMADLELGA
HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
NWTQYWSGSLNYQWRTPADESSLLILGASRTGSQWLLNWRPSSTWQSSVDWANYDYHDLN
CHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
ESDLGSGSIINAQSTWRPWLSRFSPGVRVRHTRADFTAGGDSMAQVRALLPPGAQTLPLP
CCCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCC
QDYHESEIVLLLGQPDVHIRAHRLQGWGEIGYSENSLSGAGFTGRFGVEGPLIGRDEWKI
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YAEQQLNSGGSDEDSYRFGLQYRIYY
EEHHHCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MKFRLLLMVVLASVLAGAWTAHAADPEPYVERYYDRSYRVFMASGNLPRARQVIENALYW
CCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
RSDDERWWRRLAEVSRWLGDPETALKAWRQVAELSNDPQAWKHVLELAPLTYNNRLALRA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEHEE
HKALLSVSPYDAGIIATIGRQYELLGQPEAGLRFFEQWRRSYPSKAVLREMQRLALNQGE
HHHHHCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLLAAGYSREYMDRFGPEPLMAEQAADLYWLNGQREKALLDLNRDANQLPYIPALSRRIA
HHHHCCCCHHHHHHCCCCCHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHH
VMAGELGEWDLALSRYQELVDNEDDQIDDLYNYITLSRYYQPERLALLMGRAWRKNGDPQ
HHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
LALGALYQLQSRGDDAAIDAFLKGLSAEQRQRLEQTPEFLRFYANLQLHRGDADAAQRWL
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCEEECCCHHHHHHHH
NKALVLNSEDRETRISWMWLLIATGQDTALQQALVNWEDSARSDRRYWNVLAASQMALGN
HHHEEECCCCCHHEEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AEQSLRYEIELLKTARDNWERQWYYSQALIASGRNGQAWPVMRRLKEQLPFTVEPQQQAT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCHHHH
YRDMKLTLSLLFDDGDTTLKLAQAQIDGMEDVPAAHAEWLAQWAIGQSEPGLAQSWYLRK
HHHHEEEEEEEEECCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
KIAQQGPLKAGSALAYALVQGDLDSVARTREQYLGQLSLSEQLEAHVRLDEPRQAANTFM
HHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHCEEE
AIQAGAPELAGSNNLQESLLLPTALSSQFHLEQRRLGALDIQDLQFVQYHPISDFTQLSV
EEECCCCCCCCCCCCHHHHHCHHHHCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH
EARQRNFSSNDDELLQISDDEQRLSVALAYQRERFRSRLKLGQRNLLNNSETMADLELGA
HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
NWTQYWSGSLNYQWRTPADESSLLILGASRTGSQWLLNWRPSSTWQSSVDWANYDYHDLN
CHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
ESDLGSGSIINAQSTWRPWLSRFSPGVRVRHTRADFTAGGDSMAQVRALLPPGAQTLPLP
CCCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCC
QDYHESEIVLLLGQPDVHIRAHRLQGWGEIGYSENSLSGAGFTGRFGVEGPLIGRDEWKI
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YAEQQLNSGGSDEDSYRFGLQYRIYY
EEHHHCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA