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The map label for this gene is nrtC [H]

Identifier: 110833712

GI number: 110833712

Start: 947839

End: 949200

Strand: Direct

Name: nrtC [H]

Synonym: ABO_0851

Alternate gene names: 110833712

Gene position: 947839-949200 (Clockwise)

Preceding gene: 110833710

Following gene: 110833713

Centisome position: 30.38

GC content: 53.89

Gene sequence:

>1362_bases
ATGAAAAAGTTTATTCGCATAGCAATTACTGCACTGACGGTGGGGCTCTCGGCCAACGCCATGGCGGAAGATTCTGTGGG
CTGGCCGGAAAAGGCTGATCTGAAGTTTGGCTTCATCAAGCTGACCGACATGGCGCCGCTCGCTGTGGCCTACGAGAAAG
GGTTTTTTGAAGAAGAAGGTTTGTTTGTGACCTTAGAGGCCCAGGCCAACTGGAAAGTCCTGCTAGACCGGGTGATTGAC
GGTCAGCTGGATGGGGCGCACATGCTGGCAGGCCAGCCGCTGGGGGCGACTATTGGCTACGGCACCGAAGCGCACATTGT
TACGGCGTTTAGCATGGACTTAAACGGTAATGGCATCACCGTTTCCAATGCGGTGTGGGAGGAAATGAAGAAGAGCATCC
CGGTGGAGAATGGCAAACCGGTGCATCCGATCAAGGCGGATGCACTCAAGCCGGTGGTGGAAAAGTACAAAGCTGAGGGC
AAGTCTTTCAACATGGGCATGGTGTTCCCGGTATCCACTCACAACTACGAGCTGCGTTACTGGCTGGCCGCCGGTGGCCT
CAACCCGGGTTTCTACGCCCCACACAAGGGCGACACCAGTGGCCAGCTGCAGGCTGACGTATTGCTGTCGGTTACCCCGC
CACCACAAATGCCGGCCACCTTGGAAGCGGGCACCATTTACGGTTACTGCGTGGGTGAGCCTTGGAATCAGCAAGCTGTA
TTCAAAGGTATCGGTGTGCCGGTAATTACTGATTACGAAATCTGGAAGAACAACCCGGAAAAAGTGTTCGGTGTGAGTAA
GGGTTGGGCAGACAAGTATCCCAACACCCATATCCGTGTAGTGAAAGCGATGATTCGTGCGGCCAAGTGGCTGGATGAGA
ACGACAATGCCAACCGCCCGGAAGCAGTGAAGATCCTGTCTCAGCCTAACTATGTGGGGGCGGATTATGACGTGATCGCC
AACTCAATGACCGGGACCTTTGAATATGAGAAAGGTGATAAGCGTGAAGTGCCGGACTTCAATGTGTTCTTCCGCTACAA
CGCTACCTATCCATTCTACTCCGATGCCATCTGGTACCTGACGCAGATGCGTCGCTGGGGCCAAATCAGCGAATCCAAAC
CGGATAGCTGGTACATGGATATCGCCAAGCAAGTGTATCGCCCGGACATCTATGCCCAGGCGGCTAAGGCGCTGATTGCT
GAAGGCAAGATCTCTGCGGATGAGTTTCCTGACTTCGCCACCGAAGACGGCTTTAAAGCACCGCAAAAAGGCTTTATCGA
CAACATCACTTACGACGGCCGCAAACCTAATGCGTACCTGAAGAAGTTTCCGATTGGTCTGAAAGAGGGCGACGCGCTTT
AA

Upstream 100 bases:

>100_bases
GATTCGAGCAAAGGCGCTCATGGCATCCGGTCAACGATGACAGGATTCTCTGAGCGCTTTTTTTATGCCAGCGCGATAGC
AGGCAAATGAGGGAAGACGG

Downstream 100 bases:

>100_bases
CAGCGTGTCTCCTTCAAGGAGAAGCAATCATGGTGACCCTGACTTTCCCAACTTGGATGGAACCCTACCGTGCGCTGGCT
ACCGGCAAGATGTCCGGTGA

Product: nitrate transport ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MKKFIRIAITALTVGLSANAMAEDSVGWPEKADLKFGFIKLTDMAPLAVAYEKGFFEEEGLFVTLEAQANWKVLLDRVID
GQLDGAHMLAGQPLGATIGYGTEAHIVTAFSMDLNGNGITVSNAVWEEMKKSIPVENGKPVHPIKADALKPVVEKYKAEG
KSFNMGMVFPVSTHNYELRYWLAAGGLNPGFYAPHKGDTSGQLQADVLLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAV
FKGIGVPVITDYEIWKNNPEKVFGVSKGWADKYPNTHIRVVKAMIRAAKWLDENDNANRPEAVKILSQPNYVGADYDVIA
NSMTGTFEYEKGDKREVPDFNVFFRYNATYPFYSDAIWYLTQMRRWGQISESKPDSWYMDIAKQVYRPDIYAQAAKALIA
EGKISADEFPDFATEDGFKAPQKGFIDNITYDGRKPNAYLKKFPIGLKEGDAL

Sequences:

>Translated_453_residues
MKKFIRIAITALTVGLSANAMAEDSVGWPEKADLKFGFIKLTDMAPLAVAYEKGFFEEEGLFVTLEAQANWKVLLDRVID
GQLDGAHMLAGQPLGATIGYGTEAHIVTAFSMDLNGNGITVSNAVWEEMKKSIPVENGKPVHPIKADALKPVVEKYKAEG
KSFNMGMVFPVSTHNYELRYWLAAGGLNPGFYAPHKGDTSGQLQADVLLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAV
FKGIGVPVITDYEIWKNNPEKVFGVSKGWADKYPNTHIRVVKAMIRAAKWLDENDNANRPEAVKILSQPNYVGADYDVIA
NSMTGTFEYEKGDKREVPDFNVFFRYNATYPFYSDAIWYLTQMRRWGQISESKPDSWYMDIAKQVYRPDIYAQAAKALIA
EGKISADEFPDFATEDGFKAPQKGFIDNITYDGRKPNAYLKKFPIGLKEGDAL
>Mature_453_residues
MKKFIRIAITALTVGLSANAMAEDSVGWPEKADLKFGFIKLTDMAPLAVAYEKGFFEEEGLFVTLEAQANWKVLLDRVID
GQLDGAHMLAGQPLGATIGYGTEAHIVTAFSMDLNGNGITVSNAVWEEMKKSIPVENGKPVHPIKADALKPVVEKYKAEG
KSFNMGMVFPVSTHNYELRYWLAAGGLNPGFYAPHKGDTSGQLQADVLLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAV
FKGIGVPVITDYEIWKNNPEKVFGVSKGWADKYPNTHIRVVKAMIRAAKWLDENDNANRPEAVKILSQPNYVGADYDVIA
NSMTGTFEYEKGDKREVPDFNVFFRYNATYPFYSDAIWYLTQMRRWGQISESKPDSWYMDIAKQVYRPDIYAQAAKALIA
EGKISADEFPDFATEDGFKAPQKGFIDNITYDGRKPNAYLKKFPIGLKEGDAL

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 50356; Mature: 50356

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIRIAITALTVGLSANAMAEDSVGWPEKADLKFGFIKLTDMAPLAVAYEKGFFEEEG
CCHHHEEEEEEHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCC
LFVTLEAQANWKVLLDRVIDGQLDGAHMLAGQPLGATIGYGTEAHIVTAFSMDLNGNGIT
EEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCEEEEEEEEEEECCCCEE
VSNAVWEEMKKSIPVENGKPVHPIKADALKPVVEKYKAEGKSFNMGMVFPVSTHNYELRY
ECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEEEECCCEEEEE
WLAAGGLNPGFYAPHKGDTSGQLQADVLLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAV
EEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCHH
FKGIGVPVITDYEIWKNNPEKVFGVSKGWADKYPNTHIRVVKAMIRAAKWLDENDNANRP
HHCCCCCEEECHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EAVKILSQPNYVGADYDVIANSMTGTFEYEKGDKREVPDFNVFFRYNATYPFYSDAIWYL
CEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
TQMRRWGQISESKPDSWYMDIAKQVYRPDIYAQAAKALIAEGKISADEFPDFATEDGFKA
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
PQKGFIDNITYDGRKPNAYLKKFPIGLKEGDAL
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKFIRIAITALTVGLSANAMAEDSVGWPEKADLKFGFIKLTDMAPLAVAYEKGFFEEEG
CCHHHEEEEEEHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCC
LFVTLEAQANWKVLLDRVIDGQLDGAHMLAGQPLGATIGYGTEAHIVTAFSMDLNGNGIT
EEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCEEEEEEEEEEECCCCEE
VSNAVWEEMKKSIPVENGKPVHPIKADALKPVVEKYKAEGKSFNMGMVFPVSTHNYELRY
ECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEEEECCCEEEEE
WLAAGGLNPGFYAPHKGDTSGQLQADVLLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAV
EEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCHH
FKGIGVPVITDYEIWKNNPEKVFGVSKGWADKYPNTHIRVVKAMIRAAKWLDENDNANRP
HHCCCCCEEECHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EAVKILSQPNYVGADYDVIANSMTGTFEYEKGDKREVPDFNVFFRYNATYPFYSDAIWYL
CEEEEECCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
TQMRRWGQISESKPDSWYMDIAKQVYRPDIYAQAAKALIAEGKISADEFPDFATEDGFKA
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
PQKGFIDNITYDGRKPNAYLKKFPIGLKEGDAL
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]