| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833709
Identifier: 110833709
GI number: 110833709
Start: 944357
End: 944890
Strand: Direct
Name: 110833709
Synonym: ABO_0848
Alternate gene names: NA
Gene position: 944357-944890 (Clockwise)
Preceding gene: 110833708
Following gene: 110833710
Centisome position: 30.27
GC content: 51.31
Gene sequence:
>534_bases ATGAGCAAGGGGAAAGTAGCTTTAGGTATTGCATTGGGGCTGTTTGCTATCTACGTGGTGGCTGCGCCTTTCATTACCGT GTATCAAATGAAATCTGCCGCAGAAAACTATGATGGGGAGGCCCTTTCCGAACACATTGAGTTCCCTAGTGTTCGTCAGA GCCTAAAGGACCAGATGAATGTTATGTTCGCGAAGCAGATGACGGAAGACGAGGAAATGAAAGACAACCCGTTTGCGGTG TTGGGAGCGGCGTTTGCGGGAGTGATGGTCGACAAAATGGTGGATGCCTATGTCACTCCGGCAGGCATCACTCAGCTAAT GGCAGGCGAGAAGCCCCAGCCGGGAGCGGGACAAGGTGACGACAGTACTGGCAGCGCGGAACGCAACCCATGGGAGGATG CTTCTATGTCGTACGAATCTTTCGATAAATTTGTTGTAAAGGCCAAAGGCGCGGACGGTGGAGATGGAAAGTTTGTCCTT CGCCGACAAGGCATTGGCTGGAAACTCACAGAGATCATCATTCCATTGGAATGA
Upstream 100 bases:
>100_bases CCATAACAATCGCAGGCAATCCGACGCCTTTTTCATTCCGCCTCCGGCTCCATTACAAAGCCGCGGTTGCTGCGGGCGTT AGCACTCAAAAGGGGAAGTT
Downstream 100 bases:
>100_bases GTGCTAACAAGTGCATGCCAGTTGGACTGGCTTTCCGCTGCGCTCCAAATCAGCCACAAATGCGGGCGTTAGCTTCTTTC GAGGGATTTCATGATCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; Secreted Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSKGKVALGIALGLFAIYVVAAPFITVYQMKSAAENYDGEALSEHIEFPSVRQSLKDQMNVMFAKQMTEDEEMKDNPFAV LGAAFAGVMVDKMVDAYVTPAGITQLMAGEKPQPGAGQGDDSTGSAERNPWEDASMSYESFDKFVVKAKGADGGDGKFVL RRQGIGWKLTEIIIPLE
Sequences:
>Translated_177_residues MSKGKVALGIALGLFAIYVVAAPFITVYQMKSAAENYDGEALSEHIEFPSVRQSLKDQMNVMFAKQMTEDEEMKDNPFAV LGAAFAGVMVDKMVDAYVTPAGITQLMAGEKPQPGAGQGDDSTGSAERNPWEDASMSYESFDKFVVKAKGADGGDGKFVL RRQGIGWKLTEIIIPLE >Mature_176_residues SKGKVALGIALGLFAIYVVAAPFITVYQMKSAAENYDGEALSEHIEFPSVRQSLKDQMNVMFAKQMTEDEEMKDNPFAVL GAAFAGVMVDKMVDAYVTPAGITQLMAGEKPQPGAGQGDDSTGSAERNPWEDASMSYESFDKFVVKAKGADGGDGKFVLR RQGIGWKLTEIIIPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19124; Mature: 18993
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGKVALGIALGLFAIYVVAAPFITVYQMKSAAENYDGEALSEHIEFPSVRQSLKDQMN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH VMFAKQMTEDEEMKDNPFAVLGAAFAGVMVDKMVDAYVTPAGITQLMAGEKPQPGAGQGD HHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC DSTGSAERNPWEDASMSYESFDKFVVKAKGADGGDGKFVLRRQGIGWKLTEIIIPLE CCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECC >Mature Secondary Structure SKGKVALGIALGLFAIYVVAAPFITVYQMKSAAENYDGEALSEHIEFPSVRQSLKDQMN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH VMFAKQMTEDEEMKDNPFAVLGAAFAGVMVDKMVDAYVTPAGITQLMAGEKPQPGAGQGD HHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC DSTGSAERNPWEDASMSYESFDKFVVKAKGADGGDGKFVLRRQGIGWKLTEIIIPLE CCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA